Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq10 102 8e-17 seq13 91.5 1e-13 seq19 89.7 5e-13 seq17 89.7 5e-13 seq1 84.2 2e-11 >seq10 Length=51566898 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||| | ||| | |||||||||||||| |||| Sbjct 4577279 GACTCCTTTTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCTTCGAGCTGTTTTCCGGCG 4577338 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||||| |||||||||||| ||||| ||||| || || || ||||| |||| Sbjct 4577339 AAGATTAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCTTGGATTTTGGCCTTCACG 4577398 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | |||||| || | || | ||| || ||||| || ||||| Sbjct 4577399 TTGTCGATGGTGTCAGAGGACTCCACCTCCAAGGTGATCGTCTTGCCAGTTAGGGTTTTC 4577458 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 4577459 ACGAAGATCTGCAT 4577472 >seq13 Length=45874162 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | || || || || ||||| ||||| | ||| | | Sbjct 23087731 CGCAACACCAAGTGCAGGGTAGATTCCTTCTGGATGTTATAGTCAGCAAGGGTTCTTCCA 23087790 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| |||| | |||| || | |||||| ||||| || || ||||| || Sbjct 23087791 TCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATACCTTCCTTG 23087850 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||||| | || | ||||| | |||||| || | || | Sbjct 23087851 TCCTGAATCTTAGCTTTCACATTGTCTATGGTATCTGAACTCTCCACCTCCAAGGTTATG 23087910 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| |||||| | |||||||||||| Sbjct 23087911 GTCTTTCCGGTCAAAGTTTTAACGAAAATCTGCAT 23087945 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||| ||||| ||| | ||| | |||||||||||||| |||| Sbjct 25114719 GATTCTTTCTGAATATTGTAATCGGCGAGGGTTCTGCCGTCTTCGAGCTGTTTTCCGGCG 25114778 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | ||||| || ||||| || |||||||| || || || || ||||| Sbjct 25114779 AAGATCAAGCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGGATCTTAGCTTTCACG 25114838 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | ||| || || | ||| | ||||||||| || || ||||| Sbjct 25114839 TTATCGATGGTGTCAGAGGACTCGACCTCTAGCGTAATCGTTTTACCGGTTAGGGTTTTG 25114898 Query 132110 ATGAAAATCTGCATG 132124 | ||| || |||||| Sbjct 25114899 ACGAAGATTTGCATG 25114913 >seq19 Length=50746504 Score = 89.7 bits (98), Expect = 5e-13 Identities = 239/360 (66%), Gaps = 9/360 (3%) Strand=Plus/Plus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 |||||||| || || ||| ||||| | || || ||||||||||| |||||| || Sbjct 32416566 ATGCCGGGGCTCACTTTCTCAAACGAACTCATTTCTCGCGACGAAGGGCTACACTGCGAT 32416625 Query 46974 TTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAAATTAAACTCGGA-CACGATCCT 47032 || |||||||| ||| || ||| |||| | | | ||| | || Sbjct 32416626 TTCGCGTGTCTGCTCTACTCTCTGC---TGAGGCAGAAGCTCACCGAGGAGCGCGTGAGG 32416682 Query 47033 GAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCG--GCGCTGCCC 47090 ||| ||| ||||| || ||| || || ||||||| | |||| ||||||||| Sbjct 32416683 GAGATTGTG-AGGGACGCCGTGGATATTGAGCGGGAGTTTGTG--TGCGACGCGCTGCCC 32416739 Query 47091 GTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGAT 47150 ||| ||| |||| ||||||| | | ||| | |||| |||||||||||||| ||| Sbjct 32416740 TGCGCGTTGGTGGGGATGAACGGTGATTTGATGAGTCAATACATTGAGTTTGTGGCAGAT 32416799 Query 47151 CGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTT 47210 || || ||| | ||| || ||| | |||| || || ||||| || | Sbjct 32416800 CGGTTGCTGGGGGCGCTTGGGTGCGGGAAGGTGTACAATGTTCAGAACCCGTTCGATTGG 32416859 Query 47211 ATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTAT 47270 ||| | |||||||| |||| || ||||| || |||||||| || ||||| |||||| Sbjct 32416860 ATGGAGCTGATTTCGCTGCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTCGGGGAGTAT 32416919 >seq17 Length=41641078 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| |||||||||||| | ||| || ||| || ||||||||||| | | Sbjct 3124437 GATTCCTTTTGGATGTTGTAGTCGGCAAGGGTTCGACCATCCTCAAGCTGTTTACCCGCA 3124378 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || || ||||| || || ||| || ||||| Sbjct 3124377 AAGATAAGTCTCTGCTGGTCAGGTGGGATCCCTTCCTTGTCTTGAATCTTAGCTTTCACG 3124318 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | |||||| || | || | || ||||| |||| |||||| Sbjct 3124317 TTATCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCGGTCAAAGTTTTC 3124258 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 3124257 ACGAAGATCTGCAT 3124244 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||||||||| || | | | || || || || ||||| || || | ||| || ||| Sbjct 3124912 CAAAACCAAGTGCAGGGTAGATTCCTTCTGGATGTTATAATCTGCAAGGGTTCGTCCATC 3124853 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| ||||||||||| | | |||| || | ||| || ||||| || || || || ||||| Sbjct 3124852 TTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTATC 3124793 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || ||||| | || | ||||| | |||||| || | || | || Sbjct 3124792 TTGAATCTTGGCTTTCACATTGTCTATGGTATCTGAACTCTCCACCTCCAAGGTGATGGT 3124733 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || |||| ||| || | ||||||||||||| Sbjct 3124732 CTTTCCCGTCAAAGTCTTGACGAAAATCTGCATG 3124699 >seq1 Length=56831395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || || || ||||| || |||| Sbjct 3099050 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTCCCGGCG 3098991 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || ||||| |||||||| || || || || |||| Sbjct 3098990 AAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 3098931 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | |||||| || | ||| | ||||||||| || || ||||| Sbjct 3098930 TTGTCGATGGTGTCCGAAGACTCCACCTCCAACGTGATCGTTTTACCCGTTAGGGTTTTC 3098871 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 3098870 ACGAAGATCTGCAT 3098857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476604104450760