Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq13 105 6e-18 seq10 105 6e-18 seq19 87.8 2e-12 >seq13 Length=45874162 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | || || ||||| ||||||| ||| |||| ||| | || ||||| | Sbjct 25115144 CAATATGCAGATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTC 25115085 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||| || ||||| | || ||| ||||| || || || || || || || || Sbjct 25115084 CTCCGACACAATCGATAACGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCGGA 25115025 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||| | | || | || ||| |||||||||||||| | |||| | || |||||| Sbjct 25115024 TCAGCAGCGTTTGATCTTCGCCGGTAAACAACTCGAAGACGGCAGAACTCTCGCCGATTA 25114965 Query 25351 CAATATTCAAAAAGAATCCAC 25371 |||||| || |||||||| || Sbjct 25114964 CAATATCCAGAAAGAATCGAC 25114944 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| ||||||| ||| |||| ||| | || ||||| || Sbjct 25114913 CATGCAAATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTCCTC 25114854 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || ||||| | || ||| || || || || || || || || || || || Sbjct 25114853 TGACACCATCGATAACGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCACCAGACCA 25114794 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| | | || | || ||| ||||| |||||||| | |||| || ||||||||| Sbjct 25114793 GCAGCGCTTGATCTTCGCCGGAAAACAGCTCGAAGACGGCAGAACCCTCGCCGATTACAA 25114734 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTG 25384 |||||| |||||||| || ||||| | ||| Sbjct 25114733 TATTCAGAAAGAATCGACGCTTCATCTGGTG 25114703 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || || || |||||| | || || | || || ||| Sbjct 23087718 CATGCAAATCTTTGTTAAGACTTTGACTGGAAAAACCATAACTTTGGAGGTTGAAAGTTC 23087659 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || || | || || ||| ||| || || ||||| || || || ||||| Sbjct 23087658 TGATACCATTGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCA 23087599 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 ||| || || |||| | || || ||||| ||||||| | | | || ||| ||||| Sbjct 23087598 GCAGAGGCTTATTTTTGCTGGGAAGCAACTGGAAGATGGTCGTACCTTGGCAG--ATTAC 23087541 Query 25352 AATATTCAAAAAGAATCCACCATTCAT 25378 |||||||| || ||||||||| | ||| Sbjct 23087540 AATATTCAGAAGGAATCCACCTTGCAT 23087514 >seq10 Length=51566898 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| | || || ||| | |||||| | || || || || Sbjct 4577245 CATGCAAATCTTCGTCAAAACCCTTACTGGCAAAACAATCACGCTAGAGGTGGAGTCCTC 4577186 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| || ||||| | || ||| || ||| ||||| || || || || || ||||| Sbjct 4577185 CGACACAATCGATAACGTGAAAGCCAAGATTCAAGATAAGGAAGGGATTCCTCCGGATCA 4577126 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||| | | || | || ||| |||||||||||||| | |||| || ||||||||| Sbjct 4577125 GCAACGTTTGATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACCCTCGCCGATTACAA 4577066 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||| || |||||||| || | ||||| ||| Sbjct 4577065 TATCCAGAAAGAATCGACTCTGCATTTGGTG 4577035 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| ||||||| ||| |||| ||| | || || || || Sbjct 4577016 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATTACGCTAGAGGTAGAGTCCTCT 4576957 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| || || ||||| || ||||| || || |||||| Sbjct 4576956 GACACAATCGATAACGTGAAAGCGAAGATCCAGGATAAGGAAGGTATTCCACCGGATCAG 4576897 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || || | || ||| || || | ||||| | |||| || |||||||||| Sbjct 4576896 CAACGTCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGAACCCTCGCCGATTACAAT 4576837 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTG 25384 |||||||| ||||| || ||||| | ||| Sbjct 4576836 ATTCAAAAGGAATCGACGCTTCATCTGGTG 4576807 >seq19 Length=50746504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || || | || || | || || ||| | Sbjct 29366816 ATGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 29366757 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || ||| || ||| || || |||||||| || || |||||| Sbjct 29366756 GATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAG 29366697 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 ||||| ||||||| | || | ||| | ||||||| | | | || ||| |||||| Sbjct 29366696 CAAAGGCTCATTTTTGCTGGGAGGCAATTAGAAGATGGTCGTACCTTGGCAG--ATTACA 29366639 Query 25353 ATATTCAAAAAGAATCCACCATTCAT 25378 ||||||| || ||||||||||| ||| Sbjct 29366638 ATATTCAGAAGGAATCCACCATGCAT 29366613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445087773657120