Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 3e-14 seq19 89.7 4e-13 seq13 89.7 4e-13 seq17 86.0 5e-12 >seq7 Length=44630203 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| |||||||| ||| | || || | Sbjct 36855588 ATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 36855647 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| || ||| ||||||||||| | || || ||| Sbjct 36855648 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCAA 36855707 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| |||||||| | |||||| ||| ||| ||||||||| Sbjct 36855708 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAAC 36855767 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || |||||||||||||| || || || || Sbjct 36855768 ATCCAAAAAGAATCTACCCTCCACTTGGT 36855796 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| ||||||||||| |||| ||| | Sbjct 36855816 ATGCAAATCTTTGTGAAGACCCTTACTGGGAAGACCATTACTTTGGAGGTAGAGAGCTCA 36855875 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | ||||| ||| || ||||| || || | || || ||| Sbjct 36855876 GACACAATTGACAATGTGAAGGCAAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 36855935 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| |||||||| | |||||| ||| ||| ||||||||| Sbjct 36855936 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAAC 36855995 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || |||||||||||||| || || || || Sbjct 36855996 ATCCAAAAAGAATCTACCCTCCACTTGGT 36856024 >seq19 Length=50746504 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || |||| || |||||||||||| |||| ||| | Sbjct 29366816 ATGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 29366757 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | |||||| || ||| ||||| || || | || ||||| Sbjct 29366756 GATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAG 29366697 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 |||||||| |||| ||| || | |||||||||||| | || ||| |||||||| Sbjct 29366696 CAAAGGCTCATTTTTGCTGGGAGGCAATTAGAAGATGGTCGTACCTTGGCAGATTACAAT 29366637 Query 106440 ATACAAAAAGAATCTAC 106456 || || || ||||| || Sbjct 29366636 ATTCAGAAGGAATCCAC 29366620 >seq13 Length=45874162 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || ||||| ||||| ||||||||||| ||| | || ||| || | Sbjct 23083933 ATGCAGATATTCGTGAAAACTTTGACCGGCAAGACCATCACCCTTGAGGTGGAATCCTCC 23083874 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || ||| || ||| ||||| ||||| | || ||| || Sbjct 23083873 GACACCATTGACAACGTAAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAG 23083814 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || ||||| | |||||| |||||| | || ||| | || | | |||||||||| Sbjct 23083813 CAGAGACTTATCTTTGCGGGTAAACAACTTGAGGATGGTCGCACCCTTGCCGATTACAAC 23083754 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || ||||| ||||| || || ||| Sbjct 23083753 ATCCAAAAGGAATCAACCCTCCAT 23083730 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || ||||| ||||| ||||||||||| ||| | || ||| || | Sbjct 23088401 ATGCAGATATTCGTAAAAACTTTGACCGGCAAGACCATCACCCTTGAGGTGGAATCCTCC 23088342 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || ||| || ||| ||||| ||||| | || ||| || Sbjct 23088341 GACACCATTGACAACGTAAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAG 23088282 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || ||||| | |||||| |||||| | || ||| | || | | |||||||||| Sbjct 23088281 CAGAGACTTATCTTTGCGGGTAAACAACTTGAGGATGGTCGCACCCTTGCCGATTACAAC 23088222 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || ||||| ||||| || || ||| Sbjct 23088221 ATCCAAAAGGAATCAACCCTCCAT 23088198 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| |||||||| ||| | || || | Sbjct 29045551 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29045492 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| || ||| ||||||||||| | || || ||| Sbjct 29045491 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29045432 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || ||||| | |||||| ||| ||| ||||||||| Sbjct 29045431 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 29045372 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || ||||||||||| || || || || Sbjct 29045371 ATCCAGAAAGAATCTACCCTCCACTTGGT 29045343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| |||||||| ||| | || || | Sbjct 29059485 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29059426 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| || ||| ||||||||||| | || || ||| Sbjct 29059425 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29059366 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || ||||| | |||||| ||| ||| ||||||||| Sbjct 29059365 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 29059306 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || ||||||||||| || || || || Sbjct 29059305 ATCCAGAAAGAATCTACCCTCCACTTGGT 29059277 >seq17 Length=41641078 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || |||| || |||||||||||| |||| ||| | Sbjct 3125156 ATGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 3125215 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | |||||| || ||| ||||| ||||| | || ||||| Sbjct 3125216 GATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAAGGTATCCCTCCAGATCAG 3125275 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || || ||||| |||||| | || ||| |||||||| Sbjct 3125276 CAGAGGCTCATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGATTACAAT 3125335 Query 106440 ATACAAAAAGAATCTAC 106456 || || || ||||| || Sbjct 3125336 ATTCAGAAGGAATCCAC 3125352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402323760060128