Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 2e-13 seq10 91.5 2e-13 seq16 82.4 8e-11 seq7 82.4 8e-11 >seq19 Length=50746504 Score = 91.5 bits (100), Expect = 2e-13 Identities = 272/407 (67%), Gaps = 12/407 (3%) Strand=Plus/Minus Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAG-- 74922 || || ||||| ||||| || ||||| || || || | ||||| || | ||||| | Sbjct 32415924 AAAATACCTTCAACACATGCGAAGGCAACGAGACGCTCGGCGAA-GGAG--TCGGAGGAA 32415868 Query 74923 TC-ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGC 74980 || ||||| | ||||| | ||||| ||| |||||| | || ||||| || Sbjct 32415867 TCGATCCAGCGAAGGGCCCACTGGGCTTTCTTAGCGAC-GCAGGGGATGGTGTCGATGGC 32415809 Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACG-AGCTTGTCAATCATAAGTGAGT 75039 |||||||| ||||| |||| ||||||| | || || || | | || || Sbjct 32415808 ACGGAAGAGGTGGTTCTTCTGGTCGGAGTCCTTGATGTAGGTT-TCGAGGAGGAGGCTGT 32415750 Query 75040 ACGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCT 75098 || |||| || || || |||| || ||| |||| | ||||||| | ||| ||||| Sbjct 32415749 ACATCTCGGAGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGGCCCGGGCCTCG 32415691 Query 75099 GCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAG 75158 | | ||| | ||||||| || | | ||| ||||| | ||||||||| || ||| Sbjct 32415690 GGGAGCTGGATCTCCTTTGTGAAGCGCCCGGCGAGGTTCTCGAGGACGATGCCATCGGAG 32415631 Query 75159 GCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCC 75218 |||||||| || || || || ||| ||||||||||| |||| ||||| |||| Sbjct 32415630 GCGGCGAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGCCGTCGGTGAGGGAGTCC 32415571 Query 75219 CAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || | |||||| | | || | |||||| |||||||||| Sbjct 32415570 CAGTGGCGGAGGTCCTGGGAGAGGTCCACCTCCTCCGCCGTCCAGAA 32415524 >seq10 Length=51566898 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 38431024 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 38431083 Query 79684 TGAGCTACGAAAGCA 79698 ||||||||||||||| Sbjct 38431084 TGAGCTACGAAAGCA 38431098 >seq16 Length=37887014 Score = 82.4 bits (90), Expect = 8e-11 Identities = 274/411 (67%), Gaps = 14/411 (3%) Strand=Plus/Plus Query 74862 AAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAA 74921 || || || ||||| ||||| || ||||| || || || | ||||| || | ||||| Sbjct 5526932 AACAAAATACCTTCCACACATGCGAAGGCAACGAGACGCTCGGCGAA-GGAG--TCGGAG 5526988 Query 74922 G--TC-ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGAT 74977 | || ||||| | ||||| | ||||| | | | |||| |||| || ||||| Sbjct 5526989 GAATCGATCCAGCGTAGGGCCCACTGGGCTTT-CTTGGTAACGCACGGGATGGTGTCGAT 5527047 Query 74978 CGCTTGGAAGAGGCTTGC-CTTCTCTTCGGGATCCTTGACG-AGCTTGTCAATCATAAGT 75035 || |||||||| | || ||||| || ||||||| | || || || | | || Sbjct 5527048 GGCGCGGAAGAGG-TGGCTCTTCTGGGAGGAGTCCTTGATGTAGGTT-TCGAGGAGGAGG 5527105 Query 75036 GAGTACGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGC 75094 |||| |||| || ||||| |||| || ||| |||| | ||||||| | || || Sbjct 5527106 CTGTACATCTCGGAGTGAATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGGCGCGGGC 5527164 Query 75095 CTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTC 75154 ||| | || || | ||||| | || | ||| ||||| | ||||||||||| Sbjct 5527165 CTCGGGGATTTGGATTTCCTTCGTGAAGCGCCCAGCGAGGTTCTCAAGTACGATGCCGTC 5527224 Query 75155 CGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTT 75214 ||||||||||| || || || || ||| ||||||||||| |||| || || Sbjct 5527225 GGAGGCGGCGAAGAAGGCGAGGACGTGACTGACGAAGTGGCGCTCGCCGTCGGTCAGGGA 5527284 Query 75215 GTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 |||||| | |||||| || | || | |||||| |||||||||| Sbjct 5527285 GTCCCAGTGGCGGAGGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAA 5527335 >seq7 Length=44630203 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 10607581 TGCTTTCATTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 10607640 Query 79684 TGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 10607641 TGAGCTATGAAAGCA 10607655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547207853321800