Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 3e-14 seq11 89.7 4e-13 seq6 84.2 2e-11 >seq4 Length=52388848 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | || || | |||||| ||||| ||||| ||| Sbjct 847741 TGAGCAATCATGCATGTCAAAAGGGCATAAGATGCAATATTAAATGGAACGCCCAGGCCC 847682 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || |||| ||| |||| ||| || || | |||||||| ||| ||||||||||| Sbjct 847681 ATGTCAGCAGATCGCTGATACATTTGACATGATAACTCCCCGTGTGCTACATAAAACTG 847623 >seq11 Length=34766867 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| |||||| | || || | |||||| || |||||||| ||| Sbjct 8814376 TGAGCAATCATGCATGTCAGGAGCGCATAAGATGCAATATTAAATGGGACACCCAGGCCC 8814317 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || |||| ||| |||| ||| || || |||||||| ||||| ||||| ||||| Sbjct 8814316 ATGTCGGCAGATCGCTGATACATTTGACATGATAGCTCCCCATTTGCTACATAGAACTG 8814258 >seq6 Length=51416163 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | || || | |||||| |||| ||||| ||| Sbjct 831296 TGAGCAATCATGCATGTCAAAAGGGCATAAGATGCAATATTAAATGGAATGCCCAGGCCC 831237 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 || || || |||| ||| |||| ||| || || | |||||||| ||| ||||||||||| Sbjct 831236 ATATCAGCAGATCGCTGATACATTTGACATGATAACTCCCCGTGTGCTACATAAAACTG 831178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414470783739724