Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 3e-14 seq7 86.0 5e-12 >seq13 Length=45874162 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || ||||| || || ||||||||||| |||| ||| || |||||| Sbjct 29046026 CACCAAGTGGAGGGTAGATTCCTTCTGGATATTGTAATCAGCCAAGGTTCTGCCATCTTC 29046085 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | || || || ||| | |||||||||||||||||| || | || |||||||| Sbjct 29046086 TAGCTGCTTTCCTGCAAAGATAAGCCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTG 29046145 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 ||| || || |||| | | | || || | | | || | ||| || || || Sbjct 29046146 AATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATTGTCTT 29046205 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || |||||||| |||| ||| ||||||||| Sbjct 29046206 TCCGGTCAATGTCTTAACAAAGATTTGCATT 29046236 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || ||||| || || ||||||||||| |||| ||| || |||||| Sbjct 29059732 CACCAAGTGGAGGGTAGATTCCTTCTGGATATTGTAATCAGCCAAGGTTCTGCCATCTTC 29059791 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | || || || ||| | |||||||||||||||||| || | || |||||||| Sbjct 29059792 TAGCTGCTTTCCTGCAAAGATAAGCCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTG 29059851 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 ||| || || |||| | | | || || | | | || | ||| || || || Sbjct 29059852 AATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATTGTCTT 29059911 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || ||||| || |||| ||| ||||||||| Sbjct 29059912 TCCGGTCAAGGTCTTAACAAAGATTTGCATT 29059942 >seq7 Length=44630203 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || ||||||||||| || |||||||| |||| ||| | |||||| Sbjct 36855797 CACCAAGTGGAGGGTAGATTCTTTTTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTC 36855738 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 | |||||||| ||| | || ||||| ||||||||| || | ||||||||||| Sbjct 36855737 AAGCTGTTTGCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGGATACCTTCTTTGTC 36855681 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || ||||||||||| || |||||||| |||| ||| | |||||| Sbjct 36856025 CACCAAGTGGAGGGTAGATTCTTTTTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTC 36855966 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | |||||||| ||| | || ||||| ||||||||| || | || || ||||| Sbjct 36855965 AAGCTGTTTGCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGGATACCCTCCTTGTCTTG 36855906 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 || ||| ||||||| | | | || |||| | | | || | ||||| || || Sbjct 36855905 GATCTTTGCCTTCACATTGTCAATTGTGTCTGAGCTCTCTACCTCCAAAGTAATGGTCTT 36855846 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || | || || | ||| |||||||| Sbjct 36855845 CCCAGTAAGGGTCTTCACAAAGATTTGCAT 36855816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409654853645469