Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq20448 156 4e-33 seq25784 95.1 1e-14 seq19763 86.0 6e-12 >seq20448 Length=1126904 Score = 156 bits (172), Expect = 4e-33 Identities = 478/723 (66%), Gaps = 17/723 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| || | |||||| || || || ||||||||||| |||| || || ||| |||| Sbjct 920926 TGGTACTCCCCAACGCGCTTCTCAAAGAAGTTAGTTTTCCCCTGAAGCGAAATAAGCTCC 920867 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 || ||||||| ||||| ||| | | || |||| || | | | || Sbjct 920866 ATCCAATCAAAGGGATTCTGAGCACCGTACACCTTCCCACACCCAAGCGCATCCAGCAAC 920807 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 | |||||| ||||| || ||||| | | ||| || || | |||||| || | | ||| Sbjct 920806 CGATCCGCAACAAACTCAATATACCGACTCATCAACTCCCCGTTCATCCCCACCA-ACGC 920748 Query 16856 AC-CGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913 || |||||| || || || ||| || | ||| || | ||||| || | ||| | Sbjct 920747 ACACGGAAGCGCGTCGCACACAAACTCCCT-CTCAATCTCCACCGCGTCACGCACAAT-C 920690 Query 16914 TAGCA-ACTCGTTCCTCGGACGGTGTATGTT--TAAGATGTTTAAACATCAGACATGCGA 16970 | | || || ||||| || | | || | ||| | ||| ||||| |||| Sbjct 920689 TCCCTCACGCGCTCCTC--ACTAAGCTTCTTCCTGAGAAGCGAGTACAAGAGACACGCGA 920632 Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 | ||||| || | ||||| |||| ||| |||||||| || || || | ||| |||| Sbjct 920631 AGTCGCAGTGAAGCCCCTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGCCCCGGCA 920572 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 | || || ||||| | ||||||||||||| ||| || || |||||||| |||| Sbjct 920571 TTAACCCACGCTTCTTGAGCCAAAATATCGCGCAGAAGCTTCCGGAGAAGAATATTCCCT 920512 Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150 ||||| | || || || | | || || ||| | | ||| | | ||||| Sbjct 920511 CGACGCAAGCGAATGCCACGAGGCGCTCCGCGAAGGAT---TCTGAGGCATCGATCCAGC 920455 Query 17151 TCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATT 17210 | |||||| |||||||| | ||||| || || | |||||| ||| | Sbjct 920454 GGAGGGCCCACTGGGCTTTTTTGGTGATGCATGGGATGGTGTTTATGGCGCGAAACAGAC 920395 Query 17211 TCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 | |||||| ||| | ||| | || || || || | ||| |||||||||||||||||| Sbjct 920394 GATTTTTTTC-TGTGGAGTCTTTGATGTAGGTTTCTAAGAGGAGGCTGTACATTTCGGAG 920336 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTA-AAAGCATCGGGCTTCCGCTATTTGAAC 17328 || || || || ||||| || || || ||||| ||||| ||||| |||| | ||| | Sbjct 920335 TGGATATTTTCGATGGCGATTTGGAAGCCGTAGAAAGCG-CGGGCCTCCGGGAGTTGGAT 920277 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| | ||| || | || || ||||| |||||||||||| |||||||| || Sbjct 920276 TTCTTTGGTGAAGCGGCCGGCGAGGTTTTCTAGGACGATGCCGTCGGAGGCGGCGAAGAA 920217 Query 17389 CGC 17391 || Sbjct 920216 GGC 920214 >seq25784 Length=99802 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || |||| ||| ||||||||||| ||| |||| |||||||| ||||| ||||| Sbjct 39126 ATGTAGGTTTCGAGGAGGAGGCTGTACATCTCGAAGTGGATGTTCTCGATGGCGATCTGG 39185 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC-ACGTAGAATCGTTCCGCTAG 17352 || ||||| ||| ||||| || | ||||| | |||| ||| ||| || | || || Sbjct 39186 AAGCCGTAGAAGGCGCGGGCCTCGGGGATTTGGATTTCCTTCGT-GAAGCGCCCAGCGAG 39244 Query 17353 ATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || || |||||||||||| |||||||| || || Sbjct 39245 GTTCTCAAGTACGATGCCGTCGGAGGCGGCGAAGAAGGC 39283 >seq19763 Length=37476 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || | ||| |||||||||||||||||||| || || || ||||| || || Sbjct 21915 ATGTAGGTTTCTAAGAGGAGGCTGTACATTTCGGAGTGGATATTTTCGATGGCGATTTGG 21856 Query 17294 AATCCGTA-AAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAG 17352 || ||||| ||||| ||||| |||| | ||| | ||| | ||| || | || || Sbjct 21855 AAGCCGTAGAAAGCG-CGGGCCTCCGGGAGTTGGATTTCTTTGGTGAAGCGGCCGGCGAG 21797 Query 17353 ATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| |||||||||||| |||||||| || || Sbjct 21796 GTTTTCTAGGACGATGCCGTCGGAGGCGGCGAAGAAGGC 21758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517331012655600