Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq20448 89.7 5e-13 seq6459 86.0 6e-12 >seq20448 Length=1126904 Score = 89.7 bits (98), Expect = 5e-13 Identities = 119/163 (73%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||||||||||||||| || || || || |||| ||| ||||||||||| || || Sbjct 920641 AGACACGCGAAGTCGCAGTGAAGCCCCTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTG 920582 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| |||||| || || ||||| | ||| |||||||| ||| || || || || Sbjct 920581 AGCCCCGGCATTAACCCACGCTTCTTGAGCCAAAATATCGC-GCAGAAGCTTCCGGAGAA 920523 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 |||||| ||||| || | || || || | | || |||||| Sbjct 920522 GAATATTCCCTCGACGCAAGCGAATGCCACGAGGCGCTCCGCG 920480 >seq6459 Length=330141 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||||||||| ||||| ||||| |||||||| | || |||||||| || ||||| Sbjct 144172 AGACACGCGAAATCGCAGTGTAGCCCTTCGTCGCGAGAAATGAGTTCGTTTGAGAAAGTG 144113 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| ||||| ||||||||| || | |||||| || || ||| || || || || Sbjct 144112 AGCCCCGGCATGAGTCCTCGTTTTTTGAGCCAGAAGATAGC-GCAGAAGCTTCCAGAGAA 144054 Query 16318 GAATATACCCTCAACA 16333 ||| ||||| | |||| Sbjct 144053 GAAAATACCTTTAACA 144038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511202354804400