Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6922 96.9 3e-15 seq19384 95.1 1e-14 seq10304 95.1 1e-14 seq15262 91.5 1e-13 >seq6922 Length=1215094 Score = 96.9 bits (106), Expect = 3e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || |||||||||||||| ||||| || || ||||| |||||||| || || ||||||||| Sbjct 296748 TCATGTCAAATGTATCAGCGATCTGCCGACATGGGCCTGGGTGTCCCATTTAATATTGCA 296689 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 ||||||||| || || | |||||||| |||||| Sbjct 296688 TCTTATGCGCTCCTGACATGCATGATTGCTCATGTT 296653 >seq19384 Length=1547856 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || |||||||||||||| ||||| ||||||||||| ||||| |||| || ||| Sbjct 820050 GAGTTATCATGTCAAATGTATCAGCGATCTGCTGATATGGGCCTGGGCATTCCATTTAAT 820109 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||| |||||| || | || | |||||||| |||||| Sbjct 820110 ATTGCATCTTATGCCCTTTTGACATGCATGATTGCTCATGTT 820151 >seq10304 Length=1623844 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| || ||| Sbjct 849800 GAGTTATCATGTCAAATGTATCAGCGATCTGCTGACATGGGCCTGGGCGTTCCATTTAAT 849859 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||| |||||| || | || | |||||||| |||||| Sbjct 849860 ATTGCATCTTATGCCCTTTTGACATGCATGATTGCTCATGTT 849901 >seq15262 Length=1937660 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || || || |||||| || | || |||||||||||||| ||||| || || ||| Sbjct 1331980 CAGTTCTATGTAGCTAATGGGGAGCTATCATGTCAAATGTATCAGCGATCTGCCGACATG 1331921 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || || ||||||||| |||||| || || || | ||||| || ||| Sbjct 1331920 GGCCTGGGTGTCCCATTTAATATTGCATCTTATGCACTCCTGACATGCATGATCGCTCAT 1331861 Query 20551 GTT 20553 ||| Sbjct 1331860 GTT 1331858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399022626125650