Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq30896 109 5e-19 seq8801 95.1 1e-14 seq20448 86.0 6e-12 >seq30896 Length=1964275 Score = 109 bits (120), Expect = 5e-19 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| |||||||||||||||||||||||||||||| || || || ||||| ||||| || Sbjct 1739169 ACAAGCAAAATCACAATGAAGGCCCTCATCTCTAGAGATTAGCTCATTTGAGAATGTCAA 1739110 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 |||||||||||||||| ||||| | ||| ||||| ||| Sbjct 1739109 ACCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGCA 1739070 >seq8801 Length=1651386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| ||||||||||||| |||||| ||||||||| || || || ||||| ||||| || Sbjct 434860 ACAAGCAAAATCACAATAAAGGCCTTCATCTCTAAAGATTAGCTCATTTGAGAATGTCAA 434801 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 |||||||||||||| ||||| | ||||||||| ||| Sbjct 434800 AACTGGCATCAATCCTTTCTTTTTAAGCCAAAATATGGCA 434761 >seq20448 Length=1126904 Score = 86.0 bits (94), Expect = 6e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 |||||| || || || ||||| |||||||||| || |||||||| || || || | Sbjct 920639 ACACGCGAAGTCGCAGTGAAGCCCCTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAG 920580 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 || ||||| || || || || || | ||||||||| || ||| |||||| ||||| Sbjct 920579 CCCCGGCATTAACCCACGCTTCTTGAGCCAAAATATCGCGCAGAAGCTTCCGGAGAAGAA 920520 Query 14323 TATTCCCTCAAC 14334 ||||||||| || Sbjct 920519 TATTCCCTCGAC 920508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482145607455600