Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq20448 111 2e-19 seq24875 82.4 1e-10 >seq20448 Length=1126904 Score = 111 bits (122), Expect = 2e-19 Identities = 370/576 (64%), Gaps = 0/576 (0%) Strand=Plus/Minus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| ||||| |||||||| || ||||| |||| || | |||||| || || ||||| Sbjct 920639 ACACGCGAAGTCGCAGTGAAGCCCCTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAG 920580 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || ||||||| |||||||| || ||||||||||| | ||| |||||| ||||| Sbjct 920579 CCCCGGCATTAACCCACGCTTCTTGAGCCAAAATATCGCGCAGAAGCTTCCGGAGAAGAA 920520 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 33760 ||||| || || ||| || || | || | ||| | | | | ||| || Sbjct 920519 TATTCCCTCGACGCAAGCGAATGCCACGAGGCGCTCCGCGAAGGATTCTGAGGCATCGAT 920460 Query 33761 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33820 ||| | ||||| | ||| || || | | || || || || | |||||| ||| Sbjct 920459 CCAGCGGAGGGCCCACTGGGCTTTTTTGGTGATGCATGGGATGGTGTTTATGGCGCGAAA 920400 Query 33821 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33880 ||| |||||||| | ||||| | || || || | | || || |||||||| Sbjct 920399 CAGACGATTTTTTTCTGTGGAGTCTTTGATGTAGGTTTCTAAGAGGAGGCTGTACATTTC 920340 Query 33881 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33940 || || || ||||| ||||| || || || ||||||||| | ||||| | | || Sbjct 920339 GGAGTGGATATTTTCGATGGCGATTTGGAAGCCGTAGAAAGCGCGGGCCTCCGGGAGTTG 920280 Query 33941 CACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAA 34000 | |||| | || || | || | ||||| || || || || ||| || || Sbjct 920279 GATTTCTTTGGTGAAGCGGCCGGCGAGGTTTTCTAGGACGATGCCGTCGGAGGCGGCGAA 920220 Query 34001 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 34060 || || | || || | || || | ||| | | || | ||| | Sbjct 920219 GAAGGCGAGGACGTGGGTGATGAAGTGGCGCTCGCCGTCGCTGAGGGTGGCCCAGTGGCG 920160 Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 || || | || | ||||| || ||| | ||||| || || ||||| || || ||||| Sbjct 920159 GAGGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAAGGAGGCCTCGGCTTTCTTATA 920100 Query 34121 CATATTCCAGATGTCATGATATTGGATTGGGAAAAT 34156 ||| | |||||| | | | |||||||||||||| || Sbjct 920099 CATTTCCCAGATTTGAGGGTATTGGATTGGGAACAT 920064 >seq24875 Length=181765 Score = 82.4 bits (90), Expect = 1e-10 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 34077 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCA 34136 ||||| || ||||||||||| || || ||||| || || |||||||| | |||||| ||| Sbjct 101282 TCCACCTCCTCCACTGTCCAGAAGGAGGCCTCCGCTTTCTTATACATTTCCCAGATTTCA 101223 Query 34137 TGATATTGGATTGGGAAAAT 34156 | |||||||||||||| || Sbjct 101222 GGGTATTGGATTGGGAATAT 101203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629556461877600