Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq30896 86.0 6e-12 seq8801 82.4 7e-11 >seq30896 Length=1964275 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688 ||| |||||||||||||| | || || |||||| ||||| ||||| || ||||| || Sbjct 1739169 ACAAGCAAAATCACAATGAAGGCCCTCATCTCTAGAGATTAGCTCATTTGAGAATGTCAA 1739110 Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCA 11728 || ||||||||||||| ||||| | ||| ||||| ||| Sbjct 1739109 ACCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGCA 1739070 >seq8801 Length=1651386 Score = 82.4 bits (90), Expect = 7e-11 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688 ||| ||||||||||||| | ||||| |||||| ||||| ||||| || ||||| || Sbjct 434860 ACAAGCAAAATCACAATAAAGGCCTTCATCTCTAAAGATTAGCTCATTTGAGAATGTCAA 434801 Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAA 11733 | |||||||||||| ||||| | ||||||||| ||| |||| Sbjct 434800 AACTGGCATCAATCCTTTCTTTTTAAGCCAAAATATGGCA-CAAA 434757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468330537904800