Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq30896 109 5e-19 seq8801 96.9 3e-15 >seq30896 Length=1964275 Score = 109 bits (120), Expect = 5e-19 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| |||||||||||||||||||||||||||||| || || || ||||| ||||| || Sbjct 1739169 ACAAGCAAAATCACAATGAAGGCCCTCATCTCTAGAGATTAGCTCATTTGAGAATGTCAA 1739110 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13970 |||||||||||||||| ||||| | ||| ||||| ||| Sbjct 1739109 ACCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGCA 1739070 >seq8801 Length=1651386 Score = 96.9 bits (106), Expect = 3e-15 Identities = 85/105 (81%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| ||||||||||||| |||||| ||||||||| || || || ||||| ||||| || Sbjct 434860 ACAAGCAAAATCACAATAAAGGCCTTCATCTCTAAAGATTAGCTCATTTGAGAATGTCAA 434801 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA 13975 |||||||||||||| ||||| | ||||||||| ||| |||| Sbjct 434800 AACTGGCATCAATCCTTTCTTTTTAAGCCAAAATATGGCA-CAAA 434757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479529092778000