Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq20448 113 6e-20 seq6459 87.8 2e-12 >seq20448 Length=1126904 Score = 113 bits (124), Expect = 6e-20 Identities = 229/340 (67%), Gaps = 0/340 (0%) Strand=Plus/Minus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| ||||| |||||||| || ||||| |||| || ||||||||||| || ||||| Sbjct 920639 ACACGCGAAGTCGCAGTGAAGCCCCTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAG 920580 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || ||||||| |||||||| || ||||||||||| | ||| ||| || ||||| Sbjct 920579 CCCCGGCATTAACCCACGCTTCTTGAGCCAAAATATCGCGCAGAAGCTTCCGGAGAAGAA 920520 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 33482 ||||| || || ||| || || | || | ||| | | | | ||| || Sbjct 920519 TATTCCCTCGACGCAAGCGAATGCCACGAGGCGCTCCGCGAAGGATTCTGAGGCATCGAT 920460 Query 33483 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| | ||||| | ||| || || | | || || || || | |||||| ||| Sbjct 920459 CCAGCGGAGGGCCCACTGGGCTTTTTTGGTGATGCATGGGATGGTGTTTATGGCGCGAAA 920400 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 ||| |||||||| | ||||| | || || || | | || || |||||||| Sbjct 920399 CAGACGATTTTTTTCTGTGGAGTCTTTGATGTAGGTTTCTAAGAGGAGGCTGTACATTTC 920340 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33642 || || || ||||| ||||| || || || ||||||||| Sbjct 920339 GGAGTGGATATTTTCGATGGCGATTTGGAAGCCGTAGAAA 920300 >seq6459 Length=330141 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 || ||| |||||||||||||| || || ||||| | | ||| |||||||| || || || Sbjct 144173 CAGACACGCGAAATCGCAGTGTAGCCCTTCGTCGCGAGAAATGAGTTCGTTTGAGAAAGT 144114 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| || ||||| || || || ||||| ||||| || || | ||| |||||| || Sbjct 144113 GAGCCCCGGCATGAGTCCTCGTTTTTTGAGCCAGAAGATAGCGCAGAAGCTTCCAGAGAA 144054 Query 33420 GAAGATTCCTT 33430 ||| || |||| Sbjct 144053 GAAAATACCTT 144043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622688910517200