Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7180 113 4e-20 seq21796 98.7 1e-15 seq21071 98.7 1e-15 seq646 95.1 1e-14 seq25741 89.7 5e-13 >seq7180 Length=1421306 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| ||||||| ||| | ||||| | || | || || | Sbjct 1038825 ATGCAAATCTTCGTCAAAACCCTAACTGGCAAAACAATCACGCTAGAGGTGGAGTCCTCC 1038884 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || ||| |||||| || || |||||||| ||||| ||||| Sbjct 1038885 GACACAATCGATAACGTGAAAGCCAAGATTCAAGATAAGGAAGGGATTCCTCCGGATCAG 1038944 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || ||| |||||||||||||| | |||| | || ||| || || Sbjct 1038945 CAACGTTTGATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACCCTCGCCGATTACAAT 1039004 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || |||||||| ||| | ||| |||| || Sbjct 1039005 ATCCAGAAAGAATCGACTCTGCATTTGGTGCT 1039036 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || ||||| ||||||| || |||||||| | || | || || Sbjct 1038593 CAATATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACGATCACCTTGGAGGTGGAGTC 1038652 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||||||||| | || || || || ||||| || || || ||||| || Sbjct 1038653 CTCTGACACCATCGACAACGTGAAGGCCAAAATCCAAGACAAGGAGGGCATTCCTCCGGA 1038712 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 |||||| | | || | || ||| ||||| |||||||| | |||| | || |||||| Sbjct 1038713 TCAACAGCGTTTGATCTTCGCCGGAAAACAGCTCGAAGACGGCAGAACCCTCGCCGACTA 1038772 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| || || || |||| || ||||| Sbjct 1038773 CAACATCCAAAAGGAGTCCACGCTCCACCTCGTCCT 1038808 >seq21796 Length=372373 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 99089 ATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 99148 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 99149 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCAA 99208 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | |||||||| || ||||||| ||| | | || || ||| Sbjct 99209 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAAC 99268 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || |||||||||||||| |||| |||| || Sbjct 99269 ATCCAAAAAGAATCTACCCTCCACTTGGTGCT 99300 >seq21071 Length=2748687 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| || || || || | |||||| | || | || || | Sbjct 2709385 ATGCAGATCTTCGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAGTCCTCC 2709326 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| |||||| ||||| |||||||| || || || || Sbjct 2709325 GACACCATCGATAACGTGAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAG 2709266 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | || ||||| || || |||| | ||| | | |||||| ||| Sbjct 2709265 CAGAGACTTATCTTTGCGGGTAAACAGCTTGAGGATGGTCGAACCCTTGCCGACTACAAC 2709206 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||| |||| || || || Sbjct 2709205 ATCCAAAAGGAATCCACTCTCCACCTCGTGCT 2709174 >seq646 Length=2337744 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| || ||| |||| || | || | || || Sbjct 1860159 ATGCAAATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTCCTCT 1860218 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 1860219 GACACCATCGATAACGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCACCAGACCAG 1860278 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || ||| ||||| |||||||| | |||| | || ||| || || Sbjct 1860279 CAGCGCTTGATCTTCGCCGGAAAACAGCTCGAAGACGGCAGAACCCTCGCCGATTACAAT 1860338 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||| || | |||||||| || |||| | ||||| Sbjct 1860339 ATTCAGAAAGAATCGACGCTTCATCTGGTGCTTCGACTCCGCGGAGG 1860385 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || ||||| |||| || ||| |||| || | || | || || Sbjct 1859927 CAATATGCAGATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTC 1859986 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||| ||||| | || ||| || || ||||| ||||| || || || || Sbjct 1859987 CTCCGACACAATCGATAACGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCGGA 1860046 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || | | || | || ||| |||||||||||||| | |||| || ||| || Sbjct 1860047 TCAGCAGCGTTTGATCTTCGCCGGTAAACAACTCGAAGACGGCAGAACTCTCGCCGATTA 1860106 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || |||||||| || |||| || ||||| Sbjct 1860107 CAATATCCAGAAAGAATCGACGCTCCACCTCGTCCT 1860142 >seq25741 Length=849835 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 274578 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 274637 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 274638 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 274697 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | || ||||| || ||||||| ||| | | || || ||| Sbjct 274698 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 274757 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||||||||| |||| |||| || Sbjct 274758 ATCCAGAAAGAATCTACCCTCCACTTGGTGCT 274789 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 296636 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 296577 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 296576 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 296517 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | || ||||| || ||||||| ||| | | || || ||| Sbjct 296516 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 296457 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||||||||| |||| |||| || Sbjct 296456 ATCCAGAAAGAATCTACCCTCCACTTGGTGCT 296425 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 274350 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAGAGCTCT 274409 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 274410 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 274469 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | || ||||| || || |||| | | | | ||| || ||| Sbjct 274470 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAGGATGGCCGTACCCTTGCCGATTACAAC 274529 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| || || |||| ||||| || Sbjct 274530 ATTCAGAAAGAGTCCACCCTCCACCTGGTGCT 274561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478463934602400