Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq32646 84.2 2e-11 seq21796 84.2 2e-11 seq21071 84.2 2e-11 >seq32646 Length=539585 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| || || || || || || ||||||||| | || ||| | Sbjct 529049 ATGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 528990 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| |||| || ||| || ||| || || || || |||| ||||| Sbjct 528989 GATACTATTG-ACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCA 528931 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| || |||| ||| || | ||||||||||||| ||| |||| ||||| || Sbjct 528930 GCAAAGGCTCATTTTTGCTGGGAGGCAATTAGAAGATGGTCGTACCTTGGCAGATTACAA 528871 Query 115465 CATTCAAAAAGAGTCTACTATACAT 115489 ||||| || || || || || ||| Sbjct 528870 TATTCAGAAGGAATCCACCATGCAT 528846 >seq21796 Length=372373 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CG-G 115337 ||| | |||||||| || || || || ||||| || || ||||| || ||||| || | Sbjct 98399 TTATAGATGCAAATCTTCGTTAAGACCCTCACTGGTAAGACCATCACTCTCGAAGTCGAG 98458 Query 115338 AGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396 ||| ||| || | ||||| ||||| |||||| || || ||||| |||| Sbjct 98459 AGTTCAGATACCATA---GACAATGTAAAGGCCAAAATTCAAGACAAGGAAGGGATCCCA 98515 Query 115397 GTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCC 115456 ||||||||| | || |||| ||| ||||| || | || |||| ||| | || Sbjct 98516 CCAGATCAGCAACGTCTCATTTTTGCTGGCAAGCAGCTTGAGGATGGACGTACCCTTGCT 98575 Query 115457 GATTATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||||||| ||||| ||||| ||| | || |||| Sbjct 98576 GATTATAACATCCAAAAGGAGTCCACTCTCCACTTGGT 98613 >seq21071 Length=2748687 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 ||||| ||||| ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 2708929 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACCATCACCTTGGAGGTGGAGAGTTCA 2708870 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | || | ||||| || ||| || ||| ||||| || || ||||| || Sbjct 2708869 GATACCATA---GACAATGTGAAAGCCAAGATTCAAGATAAGGAGGGTATCCCCCCAGAC 2708813 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || ||||| | ||| || ||||| | ||||||| |||| | || |||||| Sbjct 2708812 CAGCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAAGATGGACGAACCCTTGCAGATTAT 2708753 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 ||||| || || || ||||| | || |||| ||||| Sbjct 2708752 AACATCCAGAAGGAATCTACCCTGCACTTGGTTTTGAG 2708715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425172050700400