Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq13074 96.9 4e-15 seq26213 89.7 6e-13 seq14952 89.7 6e-13 seq31591 87.8 2e-12 seq24130 87.8 2e-12 seq15262 87.8 2e-12 seq13141 86.0 7e-12 seq11514 86.0 7e-12 seq6922 86.0 7e-12 seq21071 84.2 2e-11 seq17189 84.2 2e-11 seq14943 84.2 2e-11 seq19888 82.4 8e-11 seq2347 82.4 8e-11 >seq13074 Length=2244089 Score = 96.9 bits (106), Expect = 4e-15 Identities = 81/97 (84%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 1543287 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 1543230 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTT 126364 ||| || |||||| ||| || |||||| ||||||||| Sbjct 1543229 TTCAAATCCCACAGCTGTCATATTATT-TTGGAATTT 1543194 >seq26213 Length=529322 Score = 89.7 bits (98), Expect = 6e-13 Identities = 74/89 (83%), Gaps = 6/89 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 223679 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 223736 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||| || ||||| |||||||| Sbjct 223737 GCGTGGGTTCAAATCCCACTTCTGACAAA 223765 >seq14952 Length=1323296 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/101 (80%), Gaps = 6/101 (6%) Strand=Plus/Plus Query 126261 TTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA 126320 ||| ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 449606 TTAAAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGA 449663 Query 126321 ----GCGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||| || ||||| |||||||| | || || Sbjct 449664 GAAGGCGTGGGTTCAAATCCCACTTCTGACAAACTTTTTTT 449704 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 6/89 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 470190 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAAG 470133 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||| || ||||| |||||||| Sbjct 470132 GCGTGGGTTCAAATCCCACTTCTGACAAA 470104 >seq31591 Length=783131 Score = 87.8 bits (96), Expect = 2e-12 Identities = 79/97 (81%), Gaps = 8/97 (8%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 495022 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 494965 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||| || ||||| ||||| ||| ||||| Sbjct 494964 GCGTGGGTTCAAATCCCACTTCTGAC--ATTTTTATT 494930 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/95 (82%), Gaps = 7/95 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 497365 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 497308 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA-AATTATT 126354 |||||||||| || ||||| |||||| |||| || Sbjct 497307 GCGTGGGTTCAAATCCCACTTCTGACATAATTTTT 497273 >seq24130 Length=633647 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 6/88 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 396056 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 395999 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||| || ||||| ||||||| Sbjct 395998 GCGTGGGTTCAAATCCCACTTCTGACAA 395971 >seq15262 Length=1937660 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 6/90 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 1674599 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 1674656 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||||| || ||||| ||||||| || Sbjct 1674657 CGTGGGTTCAAATCCCACTTCTGACAACTT 1674686 >seq13141 Length=895435 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/107 (79%), Gaps = 10/107 (9%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 742751 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAAG 742808 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTAT-TATTGGAATTTTT 126366 |||||||||| || ||||| |||||| ||| | |||| |||||| Sbjct 742809 GCGTGGGTTCAAATCCCACTTCTGACATATTTTCTATT---ATTTTT 742852 >seq11514 Length=1058924 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 680685 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 680742 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 680743 GCGTGGGTTCAAATCCCACTTCTGACA 680769 >seq6922 Length=1215094 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 680498 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 680441 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 680440 GCGTGGGTTCAAATCCCACTTCTGACA 680414 >seq21071 Length=2748687 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 245400 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 245457 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 245458 CGTGGGTTCAAATCCCACTTCTGACA 245483 >seq17189 Length=1469205 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 276545 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 276602 Query 126325 GGGTTCGAACCCCACACCTGACAAA 126349 |||||| || |||||| ||| |||| Sbjct 276603 GGGTTCAAATCCCACAGCTGTCAAA 276627 >seq14943 Length=369961 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 265547 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 265604 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 265605 CGTGGGTTCAAATCCCACTTCTGACA 265630 >seq19888 Length=807464 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 431426 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 431369 Query 126325 GGGTTCGAACCCCACACCTGACAA 126348 |||||| || |||||| ||| ||| Sbjct 431368 GGGTTCAAATCCCACAGCTGTCAA 431345 >seq2347 Length=275178 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 216565 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 216508 Query 126328 TTCGAACCCCACACCTGACAAA 126349 ||| || |||||| ||| |||| Sbjct 216507 TTCAAATCCCACAGCTGTCAAA 216486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556629911590800