Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq20448 172 1e-37 seq25784 113 9e-20 seq6459 98.7 2e-15 >seq20448 Length=1126904 Score = 172 bits (190), Expect = 1e-37 Identities = 430/647 (66%), Gaps = 12/647 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||| ||||| || || |||| |||||| || |||||| | ||||| Sbjct 920088 ATCTGGGAAATGTATAAGAAAGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTGGACCTC 920147 Query 42360 GCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAA--CGAAAAGTTTTTCCTCAAA 42416 | ||||| | ||| ||||| ||| || | || ||| ||| ||| Sbjct 920148 TCGCAGGACCTCCGCCA-CTGGGC--CACCCTCAGCGACGGCGAGCGCCACTTCATCACC 920204 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || ||||||||||||||||| |||||||| ||| || ||||| ||| | | Sbjct 920205 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAACCTCGCCGGCCGC 920264 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| | || | ||||| ||| |||||||||||||| || ||||| Sbjct 920265 TTCACCAAAGAAATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTCCAAATCGCCATC 920324 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 || || | ||||| || ||||| | || | | || |||||| || || Sbjct 920325 GAAAATATCCACTCCGAAATGTACAGCCTCCTCTTAGAAACCTACATCAAAGACTCCACA 920384 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 || || | ||||| ||||| | || || || ||||||| || || || | Sbjct 920385 GAAAAAAATCGTCTGTTTCGCGCCATAAACACCATCCCATGCATCACCAAAAAAGCCCAG 920444 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 ||||| ||| ||||||||| | || | | | |||| ||| | || || || || Sbjct 920445 TGGGCCCTCCGCTGGATCGA---TGCCTCAGAATCCTTCGCGGAGCGCCTCGTGGCATTC 920501 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | ||||||||| || |||||||| || |||| | | || || ||||||||| || Sbjct 920502 GCTTGCGTCGAGGGAATATTCTTCTCCGGAAGCTTCTGCGCGATATTTTGGCTCAAGAAG 920561 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 | || ||||| || ||||||||||| |||||||||||| | || |||||||| Sbjct 920562 CGTGGGTTAATGCCGGGGCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAGGGGCTT 920621 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAG 42896 || | ||||| || || ||| ||| |||| | |||||| | |||| ||||| Sbjct 920622 CACTGCGACTTCGCGTGTCTCTTGTACTCG---CTTCTCAGGAAGAAGCTTAGTGAGGAG 920678 Query 42897 CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 || || ||| || | || || |||||||| |||| |||||| Sbjct 920679 CGCGTGAGGGAGATTGTGCGTGACGCGGTGGAGATTGAGAGGGAGTT 920725 >seq25784 Length=99802 Score = 113 bits (124), Expect = 9e-20 Identities = 280/421 (67%), Gaps = 13/421 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | ||| |||||| || |||||| | ||||| Sbjct 39409 ATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCTGGACGGCGGAGGAGGTGGACCTC 39350 Query 42360 GCCAAGGACA-CGGCCGGCTGGGAGTCACT----GTCTGAGAACGAAAAGTTTTTCCTCA 42414 | ||||| | ||| |||||| || || | | | || || | ||| ||| Sbjct 39349 TCGCAGGACCTCCGCCA-CTGGGACTCCCTCAGCGACGGCGAGCGCCAC----TTCGTCA 39295 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 || | || ||||||||||||||||| |||||||| || ||||||||| || Sbjct 39294 GTCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTTGAGAACCTCGCTGGGC 39235 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||| || | || | ||||| ||| |||||||||||||||||| |||| Sbjct 39234 GCTTCACGAAGGAAATCCAAATCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCA 39175 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCG 42594 | |||||| | |||| ||| ||||| | || ||| | || |||||| ||| || Sbjct 39174 TCGAGAACATCCACTTCGAGATGTACAGCCTCCTCCTCGAAACCTACATCAAGGACTCCT 39115 Query 42595 TCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654 | || | | || ||| ||||| || || || || ||| | | ||||| || Sbjct 39114 CCCAGAAGAGCCACCTCTTCCGCGCCATCGACACCATCCCGTGCGTTACCAAGAAAGCCC 39055 Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714 | ||||| || ||||||||| | || || | |||| |||| | || || |||| Sbjct 39054 AGTGGGCCCTACGCTGGATCGA---TTCCTCCGACTCCTTCGCCGAGCGTCTCGTTGCCT 38998 Query 42715 T 42715 | Sbjct 38997 T 38997 >seq6459 Length=330141 Score = 98.7 bits (108), Expect = 2e-15 Identities = 268/407 (66%), Gaps = 5/407 (1%) Strand=Plus/Plus Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGAT 42787 || || |||||||| || |||| | | |||||||||||||| | ||| || || Sbjct 144045 GGTATTTTCTTCTCTGGAAGCTTCTGCGCTATCTTCTGGCTCAAAAAACGAGGACTC-AT 144103 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 ||| || ||||| ||||| ||||||||||| | ||||| ||||| || | || || Sbjct 144104 GCCGGGGCTCACTTTCTCAAACGAACTCATTTCTCGCGACGAAGGGCTACACTGCGATTT 144163 Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGC 42907 || || || || | ||| | || ||||| |||| | | ||||||| || ||| Sbjct 144164 CGCGTGTCTGCTCTACTC---TCTGCTGAGGCAGAAGCTCACCGAGGAGCGCGTGAGGGA 144220 Query 42908 CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTC 42967 || | | ||| |||||||| || ||| |||||| | | |||||||| | Sbjct 144221 GATTGTGAGGGACGCCGTGGATATTGAGCGGGAGTTTGTGTGCGACGCGCTGCCCTGCGC 144280 Query 42968 CCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCT 43027 |||| || |||||| || | ||| | | ||||| ||| || || || | | Sbjct 144281 GTTGGTGGGGATGAACGGTGATTTGATGAGTCAATACATTGAGTTTGTGGCAGATCGGTT 144340 Query 43028 CCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGA 43087 ||| | | | || | | | ||||| | | ||| ||||| | ||||| Sbjct 144341 GCTGGGGGCGCTTGGGTGCGGGAAGGTGTACAATGTTCAGAACCCGTTCGATTGGATGGA 144400 Query 43088 GAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCG 43134 | || ||| || |||| ||||||||||| |||||||||||||||| Sbjct 144401 GCTGATTTCGCTGCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTCG 144447 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||||||||| || ||||| ||| |||||||| ||| | |||| Sbjct 143173 CTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCCTCGAGAACCTCGCCGGGCGCTTCACA 143232 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || ||| | ||| | ||||| || |||||||||||||||||| ||||| |||||| Sbjct 143233 AAGGAGATCCAGCTCCCCGAGGCCCGGGCCTTCTACGGCTTCCAGATCGCCATCGAGAAC 143292 Query 42543 GTGCACTCTGAG 42554 | ||||| ||| Sbjct 143293 ATCCACTCCGAG 143304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943947653359200