Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1145 143 3e-29 seq14584 136 5e-27 seq14952 132 6e-26 seq20448 122 1e-22 seq13141 118 1e-21 seq6459 104 3e-17 seq10803 98.7 1e-15 seq19957 89.7 6e-13 seq10304 89.7 6e-13 seq19384 86.0 8e-12 seq19307 82.4 9e-11 >seq1145 Length=872046 Score = 143 bits (158), Expect = 3e-29 Identities = 289/423 (68%), Gaps = 12/423 (3%) Strand=Plus/Plus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAA 15976 |||||| || ||||| | || || || || ||||||| ||||| || | ||||| Sbjct 257077 ATCAAGAATGTCAACCCTGTTAGTAGCTGCAATGACAATGATACCGGTATTACCCTCAAA 257136 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036 |||||||| ||||||||||| || || | || ||||| | |||||||||| || Sbjct 257137 TCCATCCATTTCTGTCAAAAGTTGATTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 257193 Query 16037 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 |||| |||| || | |||| |||| || |||||||| ||||||| || || ||||| Sbjct 257194 ACCAATTCCAGTACCTCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 257253 Query 16094 TGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151 ||| ||| || || |||| || | ||| || || || || || |||||| Sbjct 257254 TGGGGCATTCTCTTTGGC--CTTCCTGAATAAATCGCGGACTCGAGAAGCACCAACACCA 257311 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210 ||||||||||| ||||| | | | | | |||| || || |||||| | |||||| Sbjct 257312 ACAAACATCTCTACAAACTCAGAACCTG-AGATTGAGAAAAATGGGACACCTGCTTCACC 257370 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 ||||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 257371 TGCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACC 257430 Query 16271 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 16330 | ||| || || ||| || | | |||||||| | ||||||||| ||||| | Sbjct 257431 TTTTGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTAAGAAATTCCACCAC 257490 Query 16331 CTC 16333 ||| Sbjct 257491 CTC 257493 >seq14584 Length=1259196 Score = 136 bits (150), Expect = 5e-27 Identities = 285/420 (68%), Gaps = 6/420 (1%) Strand=Plus/Minus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAA 15976 |||||| || ||||| | || || || || ||||||| ||||| || | ||||| Sbjct 1202351 ATCAAGAATGTCAACTCTGTTAGTAGCTGCAATGACAATGATACCGGTATTACCCTCAAA 1202292 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036 |||||||| ||||||||||| || || | || ||||| | |||||||||| || Sbjct 1202291 TCCATCCATTTCTGTCAAAAGTTGATTGAGGGTCTGTTCTCTTTCATCATTCCCTCCGCC 1202232 Query 16037 ACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG 16096 | |||| || | |||| |||| || |||||||| ||||||| || || |||||||| Sbjct 1202231 AATTCCAGTACCTCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCATGG 1202172 Query 16097 TTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAACA 16154 ||| || || |||| || | ||| || || || || || ||||||||| Sbjct 1202171 AGCATTCTCTTTGGC--CTTCCTGAATAAATCACGGACTCGAGAAGCACCAACACCAACA 1202114 Query 16155 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 16213 |||||||| ||||| | | | | | |||| || || |||||| | |||||| || Sbjct 1202113 AACATCTCTACAAACTCAGAACCTG-AGATTGAGAAAAATGGGACACCTGCTTCACCTGC 1202055 Query 16214 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCG 16273 ||| || || | ||| ||||| || || || || || | || || ||||| Sbjct 1202054 AATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGGCCAACAAGAAGAACACCTTT 1201995 Query 16274 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 ||| || || ||| || | |||||||||| | ||| ||||| ||||| | ||| Sbjct 1201994 TGGTATGCGAGCCCCAACAGCAGTGAATCTCTCAGGCTTCTTCAGAAATTCCACCACCTC 1201935 >seq14952 Length=1323296 Score = 132 bits (146), Expect = 6e-26 Identities = 312/464 (67%), Gaps = 18/464 (4%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTA---TCA 15974 ||||| || ||| | | || ||||| || | ||||| ||||| || |||| ||| Sbjct 651837 TCAAGAATGTCAGCCCTGTTAGTTGCTGCAACGACAATGATACCAGT---GTTACCCTCA 651893 Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| ||||||||||| ||||| | || || || | |||||||||| || Sbjct 651894 AACCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT--- 651950 Query 16035 ATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 |||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||| Sbjct 651951 CCACCAATTCCAGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATG 652010 Query 16092 CATGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACAC 16149 || || ||| || || |||| || | ||| || ||||| || || |||| Sbjct 652011 CAAGGGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGAACACGAGAAGCACCAACAC 652068 Query 16150 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCA 16208 ||||||||||||| ||||| | | | | | |||| || || || ||| || |||| Sbjct 652069 CAACAAACATCTCAACAAACTCAGAACCTG-ATATTGAGAAAAATGGAACACCAGCTTCA 652127 Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 16268 || ||||| || ||| | || ||||| || || ||||| ||| | || || | Sbjct 652128 CCAGCAATAGCCTTGGCTAACAGTGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACT 652187 Query 16269 CCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACA 16328 ||| || || || ||| || | | |||||||| | ||| ||||| |||||| Sbjct 652188 CCTTTCGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTTAGAAACTCCACA 652247 Query 16329 ATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 | ||| || || | ||||| | || | ||| ||||||| Sbjct 652248 ACCTCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 652291 >seq20448 Length=1126904 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| ||| | ||||| || || || ||||| || |||||||| || | Sbjct 920475 TCCTTCGCGGAGCGCCTCGTGGCATTCGCTTGCGTCGAGGGAATATTCTTCTCCGGAAGC 920534 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||||| || | ||||||||||||||| || | ||||| || ||| |||||||||| Sbjct 920535 TTCTGCGCGATATTTTGGCTCAAGAAGCGTGGGTTAATGCCGGGGCTCACCTTCTCCAAC 920594 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || ||||| || || ||||| || ||| Sbjct 920595 GAACTCATCTCGCGAGATGAGGGGCTTCAC 920624 >seq13141 Length=895435 Score = 118 bits (130), Expect = 1e-21 Identities = 309/464 (67%), Gaps = 18/464 (4%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTA---TCA 15974 ||||| || ||| | | || ||||| || | ||||| |||||||| |||| ||| Sbjct 579367 TCAAGAATGTCAGCCCTGTTAGTTGCTGCAACGACAATGATACCTGT---GTTACCCTCA 579311 Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| ||||||||||| ||||| | || || || | |||||||||| || Sbjct 579310 AACCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT--- 579254 Query 16035 ATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 |||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||| Sbjct 579253 CCACCAATTCCAGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATG 579194 Query 16092 CATGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACAC 16149 || || ||| || || |||| || | ||| || ||||| || || |||| Sbjct 579193 CAAGGGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGAACACGAGAAGCACCAACAC 579136 Query 16150 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCA 16208 ||||||||||||| ||||| | | | | | || | || || || ||| || |||| Sbjct 579135 CAACAAACATCTCAACAAACTCAGAACCTG-ATATAGAGAAAAATGGAACACCAGCTTCA 579077 Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 16268 || ||||| || ||| | | ||||| || || ||||| ||| | || || | Sbjct 579076 CCAGCAATAGCCTTGGCTAACAAGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACT 579017 Query 16269 CCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACA 16328 ||| ||||| || ||| || | |||||||| | ||| | ||| ||||| Sbjct 579016 CCTTTAGGAATGCGAGCCCCAACAGCAGTAAACCTCTCAGGCTTCTTTAAAAACTCCACC 578957 Query 16329 ATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 | ||| || || | ||||| | || | ||| ||||||| Sbjct 578956 ACCTCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 578913 >seq6459 Length=330141 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 102201 TGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGA 102260 |||||| | ||||| ||||||||||| |||||||||||| | |||||||| || ||| Sbjct 144036 TGTGTTAAAGGTATTTTCTTCTCTGGAAGCTTCTGCGCTATCTTCTGGCTCAAAAAACGA 144095 Query 102261 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || |||||||| || ||| ||||| ||||| || || ||||| ||||| || || ||| Sbjct 144096 GGACTCATGCCGGGGCTCACTTTCTCAAACGAACTCATTTCTCGCGACGAAGGGCTACAC 144155 >seq10803 Length=354954 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| ||| | ||||| | || || | || || |||||||| | | Sbjct 196205 TCCTTCGCGGAGCGCCTCATGGCATTCTCTTGCGTCTAAGGAATATTCTTCTCCGAAAGC 196146 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||||| || | ||||||||||||||| || | ||| |||| ||| ||||||||| Sbjct 196145 TTCTGCGCGATATTTTGGCTCAAGAAGCGCGGGTTAATGTCAGGGCTCACCTTCTCCAAT 196086 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 || | ||||| || || ||||| || ||| | || || ||| Sbjct 196085 GAATTCATCTCGCGAGATGAGGGGCTTCACTACGACTTCGCG 196044 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||| | ||| | ||||| || || | | || || |||||||| | | Sbjct 308932 TCCTTCGCGGAGTGCCTCATGGCATTCGCTTGCATCAAAGGAATATTCTTCTCCAGAAGC 308873 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||||| || | |||||||||||||| || | ||| || ||| |||||||||| Sbjct 308872 TTCTGCGCGATATTTTGGCTCAAGAAGCACGGGTTAATGTTGGGGCTCACCTTCTCCAAC 308813 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || ||||| || || ||||| || ||| Sbjct 308812 GAACTCATCTCGCGAGATGAGGGGCTTCAC 308783 >seq19957 Length=263 Score = 89.7 bits (98), Expect = 6e-13 Identities = 96/125 (77%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| |||| ||||||||||||||| ||||||| || |||||| | Sbjct 36 AAAGCCATCCATCTCCGTCAGAAGCTGGTTAATAGTCTGTTCCCTCTCGTCATTCCC--A 93 Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | | | || || | | ||| | || ||||| ||||||||||||||||| || ||| Sbjct 94 CCTCCGAGCCCCGCCCCTCTCTGCCTCCCAACGGCGTCAATCTCATCAATGAAAACAATG 153 Query 16092 CATGG 16096 || || Sbjct 154 CACGG 158 >seq10304 Length=1623844 Score = 89.7 bits (98), Expect = 6e-13 Identities = 96/125 (77%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| |||| ||||||||||||||| ||||||| || |||||| | Sbjct 1515184 AAAGCCATCCATCTCCGTCAGAAGCTGGTTAATAGTCTGTTCCCTCTCGTCATTCCC--A 1515241 Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | | | || || | | ||| | || ||||| ||||||||||||||||| || ||| Sbjct 1515242 CCTCCGAGCCCCGCCCCTCTCTGCCTCCCAACGGCGTCAATCTCATCAATGAAAACAATG 1515301 Query 16092 CATGG 16096 || || Sbjct 1515302 CACGG 1515306 >seq19384 Length=1547856 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCA-TTCGCTG 16032 ||| ||||||||||| || | |||||| |||||||||||||||| |||||| ||| Sbjct 1452087 AAACCCATCCATCTCAGTAAGAAGCTGATTAATAGTTTGTTCCCTCTCATCATTTCCACC 1452146 Query 16033 GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 | || | || || | | ||| | || ||||| ||||||||||||||||| || |||| Sbjct 1452147 TCCTAGC-CCCGCCCCTCTCTGCCTCCCAACGGCGTCAATCTCATCAATGAAAACAATGC 1452205 Query 16093 ATGG 16096 | || Sbjct 1452206 ACGG 1452209 >seq19307 Length=805934 Score = 82.4 bits (90), Expect = 9e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| ||| | ||||| || ||||| || || || |||||||| | Sbjct 179202 TCCTTCGCGGAGCGCCTCGTGGCATTCGCTTGTGTCGAAGGAATATTCTTCTCCAAAAGC 179261 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || ||| | || | ||||||||||||||| || | ||||| || || |||||||||| Sbjct 179262 TTTTGCACGATATTTTGGCTCAAGAAGCGCGGGTTAATGCCGGGGCTTACCTTCTCCAAC 179321 Query 102291 GAG 102293 ||| Sbjct 179322 GAG 179324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620485024682400