Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq15063 210 4e-49 >seq15063 Length=3774 Score = 210 bits (232), Expect = 4e-49 Identities = 325/462 (70%), Gaps = 9/462 (2%) Strand=Plus/Minus Query 207858 TCTGAGTCGATCTGACCTACCAGGTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGA 207917 |||| ||| || ||||| || | |||||| | | |||| || || || || || || Sbjct 3175 TCTGCGTCAATTTGACCGACTAAGTAAGAGGTGATTTCTGACTCTTGGGGCGCGACTTGC 3116 Query 207918 ACGTTGTCAGTTACCAGCCATGAGTTAATCCATGGAATTGGGTTAGAGTTGGTTTTGAAT 207977 |||||||| | || ||| | |||||||||||||||||||| ||||| ||| Sbjct 3115 ACGTTGTCTGAGGACAACCAAGCATTAATCCATGGAATTGGGTT-------GTTTTTAAT 3063 Query 207978 GGAAGATCCAAACCGATCGCCTGCATACGGATGTTGGTAATGTACTCAACATACTGGCAG 208037 | || || ||||| | ||| || | |||||||||||||| ||||| || Sbjct 3062 ATCGGCGGTAAGCCAATCGCATCCATGCGTAGATTGGTAATGTACTCGACATATTGCACC 3003 Query 208038 AGGATCTCTTTGTTCAGACCGATCATTGAACCATCTTTGAACAGATAGTCAGCCCACTCT 208097 | ||| | || |||| || |||||||| |||||||| |||| || | ||||| || Sbjct 3002 AAGATATTTTCATTCAAGCCAATCATTGAGCCATCTTTAAACAAGTATTTTGCCCATGCT 2943 Query 208098 TTTTCTTGCTGAGCGGTAGCAACGAACATGTCGTATGACTCT-TGACGACACTCTGCTGC 208156 |||||||| | ||| | | ||| || || ||| || || | || ||| || Sbjct 2942 TTTTCTTGTTCAGCCGCGTCTTTGAAAATTTCA-ATGGCTTGCTGTTGGCAATCTTGGGC 2884 Query 208157 AATCTCAGCCATCTCTGGATCATCTTTACCAGAGTTCATCAGGTTGATGATGTGCTGAGT 208216 || || |||| || || ||||||||||| || | ||||| || || || ||||| || Sbjct 2883 GATTTCGACCATGTCAGGGTCATCTTTACCCGATTGCATCAAATTAATCATATGCTGGGT 2824 Query 208217 ACCAACCATGTGAAGTGCTTCGTCACGTGCGATCATTTTGATGATCTTAGCGTTACCTTC 208276 || | ||||| ||||||||||| || |||||||||||||| || || |||||||| Sbjct 2823 GCCGTTTAGATGAAGCGCTTCGTCACGGGCAATCATTTTGATGATTTTGGCATTACCTTC 2764 Query 208277 CATCAGCTTACGTTCGGCAAATGCGAATGAGCAAGCGAAGGA 208318 |||||| || || || ||||| || ||||| ||||| || || Sbjct 2763 CATCAGTTTGCGCTCAGCAAAGGCAAATGAACAAGCAAACGA 2722 Score = 95.1 bits (104), Expect = 2e-14 Identities = 261/399 (65%), Gaps = 7/399 (2%) Strand=Plus/Minus Query 208533 TCATCAAAGACAATGGAAGGATCGTTAACGATGTTCCTGATGATGTGAGTATAGCTACGA 208592 ||||| || || || || || || || | ||| | || || || |||||||||||| Sbjct 2522 TCATCGAATACTTTGCTTGGGTCATTGACCACGTTACGAATAATATGGGTATAGCTACGA 2463 Query 208593 CTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCCATGTTTCCAGCTCTGGGATAGAG 208652 |||||||| ||||| || ||| || ||| ||| ||||| | ||| || || ||| Sbjct 2462 GAATGGATGGTCTCAGAAAATGACCAAGTTTCAATCCAGGTTTCTAACTCAGGAATCGAG 2403 Query 208653 CAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCTGGATAGAGTCCAGTAGTGTCTGA 208712 | | || | ||| || || | ||| || || || || || || | || || Sbjct 2402 G----CAGTAGCACGGCA---TTGGGGCTACGACCTTGAATCGAATCAAGCAAGGTTTGG 2350 Query 208713 TATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGATCTGGTAAAGCCATGTAGTCAATA 208772 || || |||||||| | ||| | || | || || ||| || | | || | | Sbjct 2349 TACTTTAGGTTACTTAAGAAGATATGCTGTTCATGCACTGACAAGTTGCTAAAATCCAAA 2290 Query 208773 CGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGAAGAAAGAAAGTTGTTTCTCAATG 208832 ||||| ||| || || | |||||| |||||||| || || || | ||| || ||||| Sbjct 2289 CGGTCTTTGGAAACGTCAATTTCTTCTGGACGCCAAAAAAACGACAATTGCTTTTCAATC 2230 Query 208833 AGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAACGAGAAACGTTGACGTTTTGACCC 208892 | | ||| || | | || |||||||||||||| | || ||||| ||||| Sbjct 2229 AACTGCTCGAAAACAGGGAATTTTTGTTGGTCGTAACGTGCCACATTGACAGGCTGACCA 2170 Query 208893 AGGAACATGTGTTCTTGTAATTGATCGTTTTTGTTTTGG 208931 | ||||| | || | ||| | || |||||| ||||| Sbjct 2169 AAAAACATCGGCTCAAGCAATGGGTCATTTTTGGTTTGG 2131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910716637484400