Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq24624 405 2e-108 seq29915 253 6e-63 seq32525 237 5e-58 >seq24624 Length=74067 Score = 405 bits (448), Expect = 2e-108 Identities = 622/881 (71%), Gaps = 6/881 (1%) Strand=Plus/Minus Query 25907 TTCATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTA 25966 || || || || || | |||||||| ||||| || |||||||| ||||| || || || Sbjct 18437 TTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTA 18378 Query 25967 ATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTA 26026 | || ||||||||||| || || || || | | || | ||| || || || | Sbjct 18377 CTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTG 18318 Query 26027 CATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACC 26085 || ||||| || || |||||||| |||| | | || || ||| |||| || ||||| || Sbjct 18317 CACTTTTATCCTATTTGGGAAGC-GGCATCTGTTGATGAATGGTTATATAACGGCGGTCC 18259 Query 26086 ATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAG 26143 ||| |||| ||||| | ||||||||| | || ||||| || | ||| ||| | || Sbjct 18258 TTATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGGCGTGAG 18201 Query 26144 TGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCA 26203 |||||||| || | | || ||| | || ||||| |||||||||| |||| || Sbjct 18200 TGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCT 18141 Query 26204 CTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGAT 26263 | | || ||| || || ||||| | |||||| | || || || || ||| ||| Sbjct 18140 GTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGAT 18081 Query 26264 GGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACAT 26323 || |||||||| || || || ||||||| || |||||| | ||||| || || | ||| Sbjct 18080 GGTATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATTTCAGGCTAAGCAT 18021 Query 26324 AATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTT 26383 ||||| || ||||| ||||| || ||| | ||| ||||| || ||||| || | | Sbjct 18020 AATATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATTCGGCGGCTCCTTA 17961 Query 26384 TTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAA 26443 ||| ||||||||| || ||||| ||||| | || ||||| ||||| | Sbjct 17960 TTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 17901 Query 26444 GTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCT 26503 | || ||| | || || | ||||| ||||| ||||| || ||||||||||| ||| Sbjct 17900 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 17841 Query 26504 GCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCT 26563 || || || || ||||| |||| || || || ||||| ||||| || || |||||| Sbjct 17840 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCT 17781 Query 26564 CTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATC 26623 | |||||||| | ||| ||||||| || || || || ||| | || || | |||||| Sbjct 17780 TTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATC 17721 Query 26624 TGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAAT 26683 |||| ||||| || ||| |||||||||| || || ||||| || ||||| ||| | | Sbjct 17720 AGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAA 17661 Query 26684 GGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTT 26743 || |||| ||| ||||||||| | | |||||||||||||| || | ||||| Sbjct 17660 GGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTA 17601 Query 26744 ATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 ||||| || |||||||||||||| || || || || |||| Sbjct 17600 ATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 17560 >seq29915 Length=314255 Score = 253 bits (280), Expect = 6e-63 Identities = 403/572 (70%), Gaps = 6/572 (1%) Strand=Plus/Plus Query 26027 CATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACC 26085 || ||||| || || |||||||| |||| | | || || ||| |||| || |||| || Sbjct 233403 CACTTTTATCCTATTTGGGAAGC-GGCATCTATTGATGAATGGTTATATAACGGCGATCC 233461 Query 26086 ATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAG 26143 ||| |||| ||| | | ||||||||| | || ||||| || | ||| ||| | || Sbjct 233462 TTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGGCGTGAG 233519 Query 26144 TGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCA 26203 |||||||| || | | || ||| | || ||||| |||||||||| |||| || Sbjct 233520 TGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCT 233579 Query 26204 CTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGAT 26263 | | || ||| || || ||||| | |||||| | || || || || ||| ||| Sbjct 233580 GTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGAT 233639 Query 26264 GGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACAT 26323 || |||||||| || || || |||||||| || |||||| | ||||| || || || ||| Sbjct 233640 GGTATGCCTCTAGGAATTTCAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCAT 233699 Query 26324 AATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTT 26383 ||||| || ||||| ||||| || ||| ||||| ||||| || ||||| || | || Sbjct 233700 AATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 233759 Query 26384 TTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAA 26443 ||| ||||||||| || ||||| ||||| | || ||||| ||||| | Sbjct 233760 TTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 233819 Query 26444 GTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCT 26503 | || ||| | || || | ||||| ||||| ||||| || ||||||||||| ||| Sbjct 233820 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 233879 Query 26504 GCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCT 26563 || || || || ||||| |||| || || || ||||| ||||| || || |||||| Sbjct 233880 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCT 233939 Query 26564 CTTCATTTCTTTCTTGCTACTTGGCCGGTTGT 26595 | |||||||| | ||| ||||||| || || Sbjct 233940 TTACATTTCTTCTTAGCTGCTTGGCCTGTAGT 233971 >seq32525 Length=219324 Score = 237 bits (262), Expect = 5e-58 Identities = 428/617 (69%), Gaps = 8/617 (1%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || || ||||| || | |||||||| || || | Sbjct 125563 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 125622 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || ||| | | || ||| | ||| ||||| | || || || || || || Sbjct 125623 ATGATTCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTTATTGCTGCCCC 125681 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || |||||||| ||||| || || || | || |||||||| Sbjct 125682 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 125741 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | || ||||| || || Sbjct 125742 TATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCTAT 125801 Query 26041 CTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 |||| ||| |||| | | || || ||| ||||||| ||||| || ||| |||| ||| Sbjct 125802 TTGGGGAGC-GGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 125860 Query 26100 TCTTCCACTTCTTAATAGGAGTAGC-AGC-ATATGCAGGGAGACAGTGGGAACTATCTTA 26157 | | ||||||||| | || ||||| || | ||| ||| | |||||||||| || Sbjct 125861 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGGCGTGAGTGGGAACTTAGTTT 125918 Query 26158 CAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCT 26217 | | || ||| | || ||||| |||||||||| |||| || | | || ||| Sbjct 125919 TCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTAC 125978 Query 26218 CGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGG 26277 || || || || | |||||| | || || || || ||| ||||| |||||||| || Sbjct 125979 TGCTGTTTTTTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGG 126038 Query 26278 TATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCA 26337 || || | |||||| || |||||| | ||||| || || | |||||||| || ||||| Sbjct 126039 AATTTCAGATACTTTCAATTTTATGATTGTATTTCAGGCTAAGCATAATATTCTTATGCA 126098 Query 26338 CCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCA 26397 ||||| || ||| ||||| ||||| || ||||| || | || ||| ||||||| | Sbjct 126099 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGTA 126158 Query 26398 CGGAAGTTTGGTTACTT 26414 || ||||| |||| Sbjct 126159 TGGTTCCTTGGTAACTT 126175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146668605388080