Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq20448 127 4e-24 seq25784 116 7e-21 seq6459 114 2e-20 >seq20448 Length=1126904 Score = 127 bits (140), Expect = 4e-24 Identities = 422/650 (65%), Gaps = 16/650 (2%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| |||| |||| ||| || || | |||||||| | | ||||| ||| | Sbjct 920726 AAACTCCCTCTCAATCTCCACCGCGTCACGCACAATCTCCCTCACGCGCTCCTCACTAAG 920667 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || || | || || | |||| || || ||||| | ||| | || || || Sbjct 920666 CTTCTTCCTGAGAAGCGAGTACAAGAGA---CACGCGAAGTCGCAGTGAAGCCCCTCATC 920610 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || |||||| ||||||||||| ||| || ||||| | ||| | || |||||||| Sbjct 920609 TCGCGAGATGAGTTCGTTGGAGAAGGTGAGCCCCGGCATTAACCCACGCTTCTTGAGCCA 920550 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 || || || ||| || |||||||| || ||||| || ||||| || ||| Sbjct 920549 AAATATCGCGCAGAAGCTTCCGGAGAAGAATATTCCCTCGACGCAAGCGAATGCCACGAG 920490 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTT-GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338 | ||| |||| || |||| | | ||||||| || ||||| | || || | Sbjct 920489 GCGCTCCGCGAAGGA----TTCTGAGGCATCGATCCAGCGGAGGGCCCACTGGGCTTTTT 920434 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCG 48398 | |||||||||| || || | |||||| || || || || || | ||| Sbjct 920433 TGGTGATGCATGGGATGGTGTTTATGGCGCGAAACAGACGATTTTTTTCTGTGGAGTCTT 920374 Query 48399 CAACATAGGTAGT---GAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 | ||||| ||| || | |||||| || ||||| | ||| || || |||| Sbjct 920373 TGATGTAGGTTTCTAAGAGGAGGCT---GTACATTTCGGAGTGGATATTTTCGATGGCGA 920317 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 | ||||| |||||||| || | |||||| | || | |||| ||| ||| | || Sbjct 920316 TTTGGAAGCCGTAGAAAGCGCGGGCCTCCGGGAGTTGGATTTCTTTGGTGAAGCGG-CCG 920258 Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || || || || ||| || || || || || || |||||||| ||||| || | | | Sbjct 920257 GCGAGGTTTTCTAGGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGTGATG 920198 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACT 48634 || ||||||||| || | |||| | |||| | | ||| | |||||||| Sbjct 920197 AAGTGGCGCTCGCCGTCGCTGAGGGTGGCCCAGTGGCGGAGGTCCTGCGAGAGGTCCACC 920138 Query 48635 TCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || ||| | ||||||||||| || ||||| || ||||| |||| || Sbjct 920137 TCCTCCGCCGTCCAGAAGGAGGCCTCGGCTTTCTTATACATTTCCCAGAT 920088 >seq25784 Length=99802 Score = 116 bits (128), Expect = 7e-21 Identities = 190/271 (70%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| |||| | ||||| || ||||||||||| ||||||||||| | |||||| Sbjct 39149 GTACATCTCGAAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTC 39208 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542 | || | ||| | | ||| | | ||||| || |||||| || || || || | Sbjct 39209 GGGGATTTGGATTTCCTTCGTGAAGCGC-CCAGCGAGGTTCTCAAGTACGATGCCGTCGG 39267 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602 | || || |||||||| ||||| || | | ||| ||||||||| || | |||| | | Sbjct 39268 AGGCGGCGAAGAAGGCGAGGACGTGACTGACGAAGTGGCGCTCGCCGTCGCTGAGGGAGT 39327 Query 48603 TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662 |||| | | ||| | |||||||| || ||| | |||||||| || || | Sbjct 39328 CCCAGTGGCGGAGGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCGG 39387 Query 48663 CTTTTTTGTACATGCCCCATATGTCCGGATA 48693 |||| |||||||| |||| || | ||||| Sbjct 39388 CTTTCTTGTACATTTCCCAGATTTGAGGATA 39418 >seq6459 Length=330141 Score = 114 bits (126), Expect = 2e-20 Identities = 187/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 ||||| ||||| | ||||| || ||||||||||| ||||||||||||| |||||| Sbjct 143306 ATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCGGGCCTCGGGG 143247 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGC 48546 | ||| | || | | ||| | | || || || ||||| ||| || ||||| || || Sbjct 143246 AGCTGGATCTCCTTTGTGAAGCGC-CCGGCGAGGTTCTCGAGGACGATGCCATCGGAGGC 143188 Query 48547 AGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCA 48606 || |||||||| ||||| || | | ||| ||||||||| || | |||| | ||| Sbjct 143187 GGCGAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGCCGTCGCTGAGGGTGGCCCA 143128 Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 | | | ||| | |||||||| || ||| | |||||||| || || ||||| Sbjct 143127 GTGGCGGAGGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCGGCTTT 143068 Query 48667 TTTGTACATGCCCCATATGTCCGGATA 48693 |||||||| |||| || | ||||| Sbjct 143067 CTTGTACATTTCCCAGATTTGAGGATA 143041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931146563212800