Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_020841.1 Length=40803 Score E Sequences producing significant alignments: (Bits) Value seq30250 271 2e-68 >seq30250 Length=51225 Score = 271 bits (300), Expect = 2e-68 Identities = 356/488 (73%), Gaps = 10/488 (2%) Strand=Plus/Minus Query 6626 TATATCCATTTCAATCGCCGCTTGCTGTGG---CTGATTGTCTGCATACTCAT-AAGACT 6681 || || |||||| || || ||||||||| ||| |||||| |||| || || ||| Sbjct 49009 TAAATTCATTTCGATAGC---TTGCTGTGGTCGCTGGTTGTCTTCATAG--ATGAAAACT 48955 Query 6682 -GTTGACCATTAACATCGCGAATGACTGCCTGGTCTGCTTCCACCGCTTGCGCCAATGTT 6740 | | |||| ||||| | || || || |||||||||| || ||| ||||| | Sbjct 48954 TGCTCGCCATCTACATCATGGATAACGGCTTGGTCTGCTTGTACGGCTGTTGCCAAAGGC 48895 Query 6741 GGCACGATTGACAACGGCGCTTGTTTGCTTAAAAGCAGCTTGATGACTGTTTTTTGAGCC 6800 | | || || ||||| || |||||||||| || | |||||| || |||||||||||| Sbjct 48894 GTATCAATGGATAACGGTGCCTGTTTGCTTAGTAGTAACTTGATAACCGTTTTTTGAGCC 48835 Query 6801 ATAGCATCAAAATTATCCTTCCAAACACCAAAACCGCCTTTAAATGACTGGCTGTACTGC 6860 || |||||||| ||||| ||||| || ||||| || ||| | |||||||||| Sbjct 48834 ATGGCATCAAAGTTATCTTTCCATACTCCAAAGCCTTTTTTTGCGGTTTGGCTGTACTTT 48775 Query 6861 TTAGCGTGCTCGTTTATTTCTTTGTTTGTCATTGCTATATGCGCTTCAAAACCGTTCAGT 6920 | || ||| | |||| ||||| | ||||||| | ||||||||| | || || || Sbjct 48774 TGAGAGTGAGCATTTAGTTCTTCAATACTCATTGCAAGGTGCGCTTCATAGCCATTGAGC 48715 Query 6921 AATTGGAAGTAAGCGATATATCCAGTAACATCACCTTTTGGCTCTTTTGGCAAAAAGGCA 6980 || || || || |||||||| ||||| | | |||| |||||| ||||||||| ||| | Sbjct 48714 AACTGAAAATATGCGATATAACCAGTGATTTGACCTGTTGGCTTTTTTGGCAATAAGCTA 48655 Query 6981 GTTAGTCGCTCAAAAACTGATTGCTCGGTATCTTCTGAATAAGTTTTGCAAGCACTAATA 7040 || | |||||| |||||| |||||||| || || || ||||| |||||| | || Sbjct 48654 GTCAAACGCTCATAAACTGTCTGCTCGGTGTCATCCGAGTAAGTAGCACAAGCATTGATG 48595 Query 7041 CGCTTAAACTGACCACTGCGCTGTGCAAGCTGAATAAATCCCTTATAACCAAGCTGAAAC 7100 |||||||| ||||| || || || || || |||||||| || ||||| ||||||||||| Sbjct 48594 CGCTTAAATTGACCGCTACGTTGCGCGAGTTGAATAAAACCTTTATAGCCAAGCTGAAAT 48535 Query 7101 TGAGCATC 7108 || || || Sbjct 48534 TGCGCCTC 48527 Score = 84.2 bits (92), Expect = 6e-12 Identities = 250/376 (66%), Gaps = 20/376 (5%) Strand=Plus/Minus Query 5973 TTGTAGCGGTATCTGATTG-ACCAGTTCGACGTGCTCATACTCATCATCGTTATAGCC-- 6029 |||||||||||| |||| |||| || | || ||| | |||||||| || || Sbjct 49671 TTGTAGCGGTATG-GATTCCACCATGTCTATATGGTCAAATTCATCATCCC-ATGGCTTT 49614 Query 6030 AAGCAAGCTATGAGGGGTAGGGAGTAGCACAAAGTCCACGTAATGCACTTTTTTACCCCA 6089 ||||| | | |||||| || |||| | |||||| | ||| ||| |||| |||| Sbjct 49613 AAGCACTCG-TAAGGGGTGGGTAGTAAGATAAAGTCAATGTAGGCAACTGGTTTATCCCA 49555 Query 6090 TAGCTCCATATAGACTTGACCTTGCCAATCATAGCCACCGTCTTTGACCTTTTGCACAGC 6149 ||| ||||||| |||| |||||| ||||| ||| ||||| |||| | || Sbjct 49554 AAGCCACATATAGCCTTGCATTTGCCAGTCATAACCATATTCTTTAGCCTTGTTTTGTGC 49495 Query 6150 GTCGTCATGTGTCCAAGGGAAACTGTCAATTGACCATGAGCACTTGGTATCTCGTATGCT 6209 ||| || ||| ||| | | ||| ||||| |||||| ||||||||||| Sbjct 49494 GTCTTCTATAAACCATGGGTGAGTATCACGCGACCAACTACACTTGATATCTCGTATGGC 49435 Query 6210 GTCATCAGTCAGTAAGTCGCACTCACCACTAAACCAT---TCATTGCTTTTGCGCTCAGT 6266 ||||| || || | ||||| ||||| || |||| | ||||| | | || || Sbjct 49434 TTCATCGGTAAGCACATCGCATTCACCTTGAATCCATGGGTTATTGCGT---CTTTCTGT 49378 Query 6267 GTTTTTTGATAACTTG---ACCGCCT-TTAGCAGACTAACAGCTTTGATTGCGTCATCTT 6322 ||||| ||||| | | |||| | |||| | ||| || || || |||||| ||| Sbjct 49377 GTTTT----TAACTGGCAAAGTGCCTGTGAGCAATCCAACTGCCTTAATAGCGTCACCTT 49322 Query 6323 CTAGCGCCAAGCCTTT 6338 | || ||||||||| Sbjct 49321 CAAGTAGCAAGCCTTT 49306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130396617348100