Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq24624 489 2e-133 seq29915 322 6e-83 seq32525 306 4e-78 >seq24624 Length=74067 Score = 489 bits (542), Expect = 2e-133 Identities = 647/896 (72%), Gaps = 6/896 (1%) Strand=Plus/Minus Query 155062 TTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTC 155121 || ||| || | || |||||||| |||| ||||| ||||||||||||||||| || || Sbjct 18449 TTTATTATCACTTTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTT 18390 Query 155122 GCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAAC 155181 |||| ||| || | ||||| ||||| ||||| |||||||| || | |||| ||| Sbjct 18389 TCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCG 18330 Query 155182 GCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTAC 155241 || || ||| | ||||| ||||||||||||||||| ||| || ||||||| ||||| || Sbjct 18329 GCTATAGGTTTGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATAT 18270 Query 155242 AATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT 155301 || || ||||||| |||| | | | |||||| | | || | | ||| Sbjct 18269 AACGGCGGTCCTTATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCTTGCTACATG 18210 Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 || ||| ||||||||||| || ||| | || |||||||||||||| ||||||||| Sbjct 18209 GGGCGTGAGTGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 18150 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || || || || | || || ||||| ||| | | |||||| | ||||| || Sbjct 18149 TCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGC 18090 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 || || |||| |||||||| || || || ||||||| || | |||| | || || || Sbjct 18089 TTTTCAGATGGTATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATTTCAG 18030 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGT 155541 || | || ||||| |||||||| || || |||||| | | ||||| ||||| ||||| Sbjct 18029 GCTAAGCATAATATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATTCGGC 17970 Query 155542 GGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACT 155601 || || | ||| ||||||||| ||||| ||||| || ||| | ||| | ||||| Sbjct 17969 GGCTCCTTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACC 17910 Query 155602 ACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAAC 155661 || || | || ||| || | ||||||| || || ||||| |||||||| ||||| Sbjct 17909 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAAT 17850 Query 155662 ATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAAC 155721 ||||| ||||||||||| || || || || | |||||||| |||||| |||||||| Sbjct 17849 ATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAAT 17790 Query 155722 TCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCT 155781 || | | | || |||||| | ||||| |||||||| || | || ||| || ||| Sbjct 17789 TCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCT 17730 Query 155782 ATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTA 155841 | ||| | || ||||| |||||| | || |||||||| |||||||| || ||||| Sbjct 17729 TTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTT 17670 Query 155842 GACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTT 155898 || |||| ||| || || ||| ||||| || ||| ||||||| ||| ||| Sbjct 17669 GA---TAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTT 17613 Query 155899 GGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGC 155954 ||||||||||||||||| || ||||| ||||| || |||||||| || || ||||| Sbjct 17612 GGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGC 17557 >seq29915 Length=314255 Score = 322 bits (356), Expect = 6e-83 Identities = 436/608 (72%), Gaps = 0/608 (0%) Strand=Plus/Plus Query 155155 TCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAA 155214 |||||||| || | |||| ||| || || ||| | ||||| ||||||||||||||| Sbjct 233364 TCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCTATTTGGGAA 233423 Query 155215 GCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCAC 155274 || ||| || ||||||| ||||| || || || | ||||| |||| | || | ||| Sbjct 233424 GCGGCATCTATTGATGAATGGTTATATAACGGCGATCCTTATGAACTAATTGTTCTACAC 233483 Query 155275 TTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGC 155334 ||| | | || | | ||| || ||| ||||||||||| || ||| | || Sbjct 233484 TTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGGGAACTTAGTTTTCGTTTGGGT 233543 Query 155335 ATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTC 155394 |||||||||||||| ||||||||| || || || || | || || ||||| ||| Sbjct 233544 ATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTC 233603 Query 155395 CTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGT 155454 | | |||||| | ||||| || || || |||| |||||||| || || || ||| Sbjct 233604 TTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCAGGT 233663 Query 155455 ACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCAC 155514 ||||| || | |||| | || || || || || || ||||| |||||||| || || ||| Sbjct 233664 ACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCAC 233723 Query 155515 ATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTG 155574 ||| | || ||||| ||||| ||||| || || || ||| ||||||||| ||||| ||| Sbjct 233724 ATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTG 233783 Query 155575 GTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAG 155634 || || ||| | ||| | ||||| || || | || ||| || | ||||||| Sbjct 233784 GTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGA 233843 Query 155635 TTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTT 155694 || || ||||| |||||||| ||||| ||||| ||||||||||| || || || || | Sbjct 233844 TTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTG 233903 Query 155695 ATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGG 155754 |||||||| |||||| |||||||| || | | | || |||||| | ||||| ||| Sbjct 233904 ATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGG 233963 Query 155755 CCTGTGGT 155762 ||||| || Sbjct 233964 CCTGTAGT 233971 >seq32525 Length=219324 Score = 306 bits (338), Expect = 4e-78 Identities = 418/584 (72%), Gaps = 0/584 (0%) Strand=Plus/Plus Query 155062 TTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTC 155121 || ||| |||| || |||||||| ||||| ||||| ||||||||||||||||| || || Sbjct 125656 TTTATTATCGCTTTTATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTT 125715 Query 155122 GCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAAC 155181 |||| ||| || | ||||| ||||| ||||| |||||||| || | |||| ||| Sbjct 125716 TCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCG 125775 Query 155182 GCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTAC 155241 || || ||| | ||||| ||||||||||||| ||| ||| || ||||||| ||||| ||| Sbjct 125776 GCTATAGGTTTGCACTTTTATCCTATTTGGGGAGCGGCATCTGTTGATGAATGGTTATAC 125835 Query 155242 AATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT 155301 || || ||||||| |||| | || | |||||| | | || | | ||| Sbjct 125836 AACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG 125895 Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 || ||| ||||||||||| || ||| | || |||||||||||||| ||||||||| Sbjct 125896 GGGCGTGAGTGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 125955 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || || || || | || || ||||| || | | |||||| | ||||| || Sbjct 125956 TCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTTTTGATCTATCCTATTGGTCAGGGAAGC 126015 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 || || |||| |||||||| || || || | |||||| || | |||| | || || || Sbjct 126016 TTTTCAGATGGTATGCCTCTAGGAATTTCAGATACTTTCAATTTTATGATTGTATTTCAG 126075 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGT 155541 || | || ||||| |||||||| || || |||||| | || ||||| ||||| ||||| Sbjct 126076 GCTAAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 126135 Query 155542 GGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACT 155601 || || || ||| ||||||| | ||||| ||||| || | | | ||| | ||||| Sbjct 126136 GGCTCCCTATTCAGTGCTATGTATGGTTCCTTGGTAACTTTTAGTTTGATCAGGGAAACC 126195 Query 155602 ACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGA 155645 || || | || ||| || | ||||||| || || ||||| Sbjct 126196 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGA 126239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584592712705200