Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq21071 102 1e-16 seq32646 100 4e-16 seq25741 96.9 5e-15 seq3517 93.3 7e-14 seq646 89.7 8e-13 seq21796 87.8 3e-12 seq7180 87.8 3e-12 seq4338 87.8 3e-12 >seq21071 Length=2748687 Score = 102 bits (112), Expect = 1e-16 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || ||||| || || ||| | || || ||| | | Sbjct 2704479 TGCAAATTTTTGTCAAGACCTTGACGGGAAAGACCATAACTTTAGAGGTTGAAGGTTCTG 2704420 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||| || || || || ||||||||||| ||||| | Sbjct 2704419 ATACAATTGAAAATGTGAAAGCTAAGATTCAGGAAAAGGAGGGCATTCCACCGGATCAGC 2704360 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||||| || ||| | | || || |||||| ||| Sbjct 2704359 AGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGAGCGTACCTTGGAAGATTACGATA 2704300 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| ||||| || Sbjct 2704299 TTCAAAAGGAATCCAC 2704284 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| || || ||||| | || || ||| | Sbjct 2708472 TGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCTG 2708413 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||| || || || ||||| || || || ||||| | Sbjct 2708412 ATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAAGGTATCCCTCCAGATCAGC 2708353 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || || ||||| || ||| | | || || ||||||| |||| Sbjct 2708352 AGAGGCTCATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGATTACAATA 2708293 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || ||||| ||| | ||| Sbjct 2708292 TTCAGAAGGAATCCACTTTGCAT 2708270 >seq32646 Length=539585 Score = 100 bits (110), Expect = 4e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || | ||||| || || ||||| | || || ||| | Sbjct 529048 TGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCTG 528989 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||| || || || || || || || || ||||| | Sbjct 528988 ATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAGC 528929 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| ||||||||||| || | |||||||| ||| | | || || ||||||| |||| Sbjct 528928 AAAGGCTCATTTTTGCTGGGAGGCAATTAGAAGATGGTCGTACCTTGGCAGATTACAATA 528869 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || ||||| || || ||| Sbjct 528868 TTCAGAAGGAATCCACCATGCAT 528846 >seq25741 Length=849835 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || || |||| || || | Sbjct 274579 TGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTG 274638 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| ||| || ||| |||||||| || ||||| || |||| Sbjct 274639 ACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAAC 274698 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || ||||| | || ||| |||| || ||||||| || | Sbjct 274699 AGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAACA 274758 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || |||||||| || |||| || || Sbjct 274759 TCCAGAAAGAATCTACCCTCCACTTGGT 274786 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || || |||| || || | Sbjct 296635 TGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTG 296576 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| ||| || ||| |||||||| || ||||| || |||| Sbjct 296575 ACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAAC 296516 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || ||||| | || ||| |||| || ||||||| || | Sbjct 296515 AGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAACA 296456 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || |||||||| || |||| || || Sbjct 296455 TCCAGAAAGAATCTACCCTCCACTTGGT 296428 >seq3517 Length=1029689 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || |||||||| || ||| | || || ||| | | Sbjct 702266 TGCAAATCTTTGTTAAGACTTTGACTGGAAAAACCATAACTTTGGAGGTTGAAAGTTCTG 702325 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || || || || || || ||||||||||| ||||| | Sbjct 702326 ATACCATTGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAGC 702385 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||| | || ||| | | || || ||||||| |||| Sbjct 702386 AGAGGCTTATTTTTGCTGGGAAGCAACTGGAAGATGGTCGTACCTTGGCAGATTACAATA 702445 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 702446 TTCAGAAGGAATCCAC 702461 >seq646 Length=2337744 Score = 89.7 bits (98), Expect = 8e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| |||| || ||||| ||||| | || || || || Sbjct 1859932 TGCAGATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTCCTCCG 1859991 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || ||| |||||| ||| || |||||||||||||| ||||| | Sbjct 1859992 ACACAATCGATAACGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCGGATCAGC 1860051 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || || || ||||||||| | || || ||||| | | ||||| |||| Sbjct 1860052 AGCGTTTGATCTTCGCCGGTAAACAACTCGAAGACGGCAGAACTCTCGCCGATTACAATA 1860111 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || ||||||||||| |||| Sbjct 1860112 TCCAGAAAGAATCGACGCTCCA 1860133 >seq21796 Length=372373 Score = 87.8 bits (96), Expect = 3e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || || |||| || || | Sbjct 99090 TGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTG 99149 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| || || || |||||||| || ||||| || |||| Sbjct 99150 ACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCAAC 99209 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || ||||| | || ||| |||| || | ||||| || | Sbjct 99210 AGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAACA 99269 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| || |||| || || Sbjct 99270 TCCAAAAAGAATCTACCCTCCACTTGGT 99297 >seq7180 Length=1421306 Score = 87.8 bits (96), Expect = 3e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| |||| || |||||||| || | || || || || Sbjct 1038826 TGCAAATCTTCGTCAAAACCCTAACTGGCAAAACAATCACGCTAGAGGTGGAGTCCTCCG 1038885 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || ||| || || ||| ||| ||||| ||||| || ||||| | Sbjct 1038886 ACACAATCGATAACGTGAAAGCCAAGATTCAAGATAAGGAAGGGATTCCTCCGGATCAGC 1038945 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || || |||||| | || || ||||| | | ||||| |||| Sbjct 1038946 AACGTTTGATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACCCTCGCCGATTACAATA 1039005 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || |||||||||||| | ||||| || Sbjct 1039006 TCCAGAAAGAATCGACTCTGCATTTGGT 1039033 >seq4338 Length=242114 Score = 87.8 bits (96), Expect = 3e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || ||| ||| || || ||||| | || || ||| | Sbjct 52143 TGCAAATATTTGTGAAGACTCTAATAGGGAAGACCATTACCTTGGAGGTGGAAAGCTGTG 52084 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||| || || || || || || || || ||||| Sbjct 52083 ATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAGT 52024 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || || ||||| || ||| | | || || ||||||| ||| Sbjct 52023 AGAGGCTCATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGATTACGATA 51964 Query 146212 TACAAAAAGAATC 146224 | ||||| ||||| Sbjct 51963 TTCAAAAGGAATC 51951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785840435756400