Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq15063 203 6e-47 >seq15063 Length=3774 Score = 203 bits (224), Expect = 6e-47 Identities = 324/462 (70%), Gaps = 16/462 (3%) Strand=Plus/Plus Query 71896 TCGTTTGCCTGCTCGTTTGCCTTTGCTGAACGCGAGCTGATGGAAGGCAACGCCAAGATC 71955 |||||||| || || |||||||||||||| ||| | ||||||||||| || ||||| ||| Sbjct 2722 TCGTTTGCTTGTTCATTTGCCTTTGCTGAGCGCAAACTGATGGAAGGTAATGCCAAAATC 2781 Query 71956 ATTAAACTGATCGCCCGTGATGAAGCCCTGCATCTGACCGGCACCCAGCACATGATCATG 72015 || ||| |||| |||||||| ||||| || ||||| | |||||||||||| ||||| | Sbjct 2782 ATCAAAATGATTGCCCGTGACGAAGCGCTTCATCTAAACGGCACCCAGCATATGATTAAT 2841 Query 72016 TTAATGAAGTCCGGTGCTGACGATGCTGAGATGGCGGAAATCGTTAAAGAGTGTGAAGCA 72075 || ||| | || ||| || || |||| |||| ||||||| |||| || || || Sbjct 2842 TTGATGCAATCGGGTAAAGATGACCCTGACATGGTCGAAATCGCCCAAGATTGCCAA-CA 2900 Query 72076 GAAA--CATACGCACTCTTTAAGGACGCTGCAGAGCAGGAGAAAGACTGGGCGAACTATC 72133 | || ||| | | | || || ||||| || || || || |||| ||||| || || Sbjct 2901 GCAAGCCAT-TGAAATTTTCAAAGACGCGGCTGAACAAGAAAAAGCATGGGCAAAATACT 2959 Query 72134 TATTCCAGGACGGGTCGATGATCGGTCTGAACAAAGAGATCGTGTGCCAGTACATCGAAT 72193 | || | || || || ||||| || |||| || | ||| || || || |||| | Sbjct 2960 TGTTTAAAGATGGCTCAATGATTGGCTTGAATGAAAATATCTTGGTGCAATATGTCGAGT 3019 Query 72194 ACATCACCAACATCCGTATTCGCGCCATCGG-TTACGATGACATCTACGCCGGTGTCAAA 72252 |||| ||||| | || || || || || |||| ||||| | | ||| Sbjct 3020 ACATTACCAATCTACGCATGGATGCGATTGGCTTAC-----------CGCCGATATTAAA 3068 Query 72253 GCTAACCCAATCCCATGGATCAACTCCTGGTTGGTTTCTGACAACGTGCAAGTCGCTCCA 72312 |||||||| |||||||| || | |||||| || ||||||||||||||||| || Sbjct 3069 AACAACCCAATTCCATGGATTAATGCTTGGTTGTCCTCAGACAACGTGCAAGTCGCGCCC 3128 Query 72313 CAGGAAGTGGAAGTAAGTTCTTATCTGGTCGGTCAGATAGAC 72354 || || ||| | | ||||| | |||||||| || ||| Sbjct 3129 CAAGAGTCAGAAATCACCTCTTACTTAGTCGGTCAAATTGAC 3170 Score = 170 bits (188), Expect = 3e-37 Identities = 267/381 (70%), Gaps = 7/381 (2%) Strand=Plus/Plus Query 71307 TGAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTATGATCAGCAGAAGTACCC 71366 ||| |||||||| | |||||| | || || || ||||||| || || || || | ||| Sbjct 2155 TGAGCCGATGTTTTTTGGTCAGCCTGTCAATGTGGCACGTTACGACCAACAAAAATTCCC 2214 Query 71367 CGCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGA 71426 | ||||| || ||||||| || ||| | || || || ||||| || ||||| | || Sbjct 2215 TGTTTTCGAGCAGTTGATTGAAAAGCAATTGTCGTTTTTTTGGCGTCCAGAAGAAATTGA 2274 Query 71427 TGTTTCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGT 71486 ||||| |||||||| | || || ||| ||| |||||| | || |||||| | Sbjct 2275 CGTTTCCAAAGACCGTTTGGATTTTAGCAACTTGTCAGTGCATGAACAGCATATCTTCTT 2334 Query 71487 TTCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGC 71546 |||||| || ||||||||| |||| || |||||||| ||||||||||| || || Sbjct 2335 AAGTAACCTAAAGTACCAAACCTTGCTTGATTCGATTCAAGGTCGTAGCCCCAA---TGC 2391 Query 71547 CTTGCTGCCGATCTGTTCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTC 71606 | |||| | | || || || || | ||||||||||||||||| ||| | || || Sbjct 2392 CGTGCTACTG----CCTCGATTCCTGAGTTAGAAACCTGGATTGAAACTTGGTCATTTTC 2447 Query 71607 TGAAACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTACTGACCCCTC 71666 ||| || || || || || || ||||| || || ||||| | | | |||||| Sbjct 2448 TGAGACCATCCATTCTCGTAGCTATACCCATATTATTCGTAACGTGGTCAATGACCCAAG 2507 Query 71667 CATCGTGTTTGATGACATCGT 71687 || || || ||||| ||||| Sbjct 2508 CAAAGTATTCGATGATATCGT 2528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 866981178820800