Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq10877 116 1e-20 seq30518 87.8 6e-12 >seq10877 Length=5867 Score = 116 bits (128), Expect = 1e-20 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 188923 CAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTA 188982 ||||| || || | ||| |||| |||| || || ||| | |||||||||||| | Sbjct 5339 CAAGCGGCAGAGTTTGATGTCGAGAGAGCGCAAAAAGGCATTATTTATATCGATGAAATT 5398 Query 188983 GATAAAAT-TGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGG 189041 |||||||| || |||| | |||| | | || |||||||| ||||| || || ||||| Sbjct 5399 GATAAAATCAGCCGTAAAAGC-GAAAACCCTTCGATTACCCGTGATGTGTCGGGTGAAGG 5457 Query 189042 AGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGG 189101 ||||||||||| | || ||| | ||||||||||| ||||| || |||| |||||||| Sbjct 5458 TGTACAGCAAGCGCTGTTGAAACTGATTGAAGGTACGGTTGCCAATATTCCACCTCAAGG 5517 Query 189102 TGG 189104 || Sbjct 5518 CGG 5520 >seq30518 Length=1635 Score = 87.8 bits (96), Expect = 6e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 403937 TTGTGCGCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTAGGTT 403996 || |||||||||||||||| |||||||||||| |||||||||| | |||| ||||| Sbjct 1165 TTATGCGCCTGTAGCTCAGTTGGATAGAGCACCCGCCTTCTAAGTGGGTGGTCACAGGTT 1106 Query 403997 CGAATCCTACCAGGCGCG 404014 |||||||| |||||||| Sbjct 1105 CGAATCCTGTCAGGCGCG 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591233853004160