Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq24624 562 9e-156 seq29915 370 3e-98 seq32525 354 2e-93 seq646 80.6 8e-11 >seq24624 Length=74067 Score = 562 bits (622), Expect = 9e-156 Identities = 667/896 (74%), Gaps = 10/896 (1%) Strand=Plus/Minus Query 18817 TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTT 18876 || ||||| | || |||||||| |||| ||||| |||||||| || || ||||||||| Sbjct 18449 TTTATTATCACTTTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTT 18390 Query 18877 GCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCA 18934 | || ||| |||||||||||||| ||||| || || ||| | |||| | | || Sbjct 18389 TCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCG 18330 Query 18935 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCT 18994 || || || | ||||| || || ||||||||||| || ||||||||||| | | Sbjct 18329 --GCTATAGGTTTGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTAT 18272 Query 18995 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTA 19052 | ||||| || || | |||| | | | |||||| | |||| || || |||| | Sbjct 18271 ATAACGGCGGTCCTTATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCT-TGCT-A 18214 Query 19053 CATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGC 19112 |||||| || |||||||||||||| | ||| | || ||||| ||||||||| |||||| Sbjct 18213 CATGGGGCGTGAGTGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGC 18154 Query 19113 CTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGG 19172 || |||||||||||||| || || |||| || ||| | ||||||| ||||||| || Sbjct 18153 ATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGG 18094 Query 19173 TTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATT 19232 |||| || | ||||||| | || ||| ||||| | ||| | ||| ||||||| Sbjct 18093 AAGCTTTTCAGATGGTATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATT 18034 Query 19233 CCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTT 19292 |||||| | ||||| || || ||||| || || |||||| | | ||| |||||||| || Sbjct 18033 TCAGGCTAAGCATAATATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATT 17974 Query 19293 CGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTG 19351 |||||| || |||| ||||| ||||| ||||| |||| || | || | ||| | | | Sbjct 17973 CGGCGGCTCCTTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGG 17915 Query 19352 AAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTT 19411 |||| || ||| | | |||| || | || |||| ||||| ||||| ||||| || | Sbjct 17914 AAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCT 17855 Query 19412 ATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCA 19471 |||| ||||| ||||||||||| |||||||| || | || ||||| || ||| |||| Sbjct 17854 ATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCA 17795 Query 19472 ACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTG 19531 ||||| |||||| |||||||||| || |||||||||||||| || || ||||||||| Sbjct 17794 ACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTA 17735 Query 19532 CCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCC 19591 |||| | || | ||||| ||||| |||||||| ||||| || || || ||||| ||| Sbjct 17734 CCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCG 17675 Query 19592 TTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACC 19651 | |||| | | |||||||| ||| |||| |||||||| ||| | || || ||||||| Sbjct 17674 TAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACC 17615 Query 19652 TCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGATTTGGCT 19707 | || | || |||||||| ||||||||||||||||| ||||| || ||| | ||| Sbjct 17614 TTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCT 17559 >seq29915 Length=314255 Score = 370 bits (410), Expect = 3e-98 Identities = 429/572 (75%), Gaps = 6/572 (1%) Strand=Plus/Plus Query 18949 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 19008 ||||| || || ||||||||||| || ||||||||||| | || ||||| | || Sbjct 233403 CACTTTTATCCTATTTGGGAAGCGGCATCTATTGATGAATGGTTATATAACGGCGATCCT 233462 Query 19009 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGT 19066 | |||| | || | |||||| | |||| || || ||| |||||||| || |||| Sbjct 233463 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGGCGTGAGT 233520 Query 19067 GGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTG 19126 |||||||||| | ||| | || ||||| ||||||||| |||||| || |||||||||| Sbjct 233521 GGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTG 233580 Query 19127 TTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACG 19186 |||| || || |||| || ||| | ||||||| ||||||| || |||| || | Sbjct 233581 TTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATG 233640 Query 19187 CTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATA 19246 ||||||| | || ||| ||||| ||||| | ||| ||||||| |||||||| |||| Sbjct 233641 GTATGCCTCTAGGAATTTCAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATA 233700 Query 19247 ACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTAT 19306 | || || ||||| || || |||||| | ||||| |||||||| |||||||| || |||| Sbjct 233701 ATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTAT 233760 Query 19307 TTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAG 19365 | ||||| ||||| ||||| |||| || | || | ||| | | ||||| || ||| | Sbjct 233761 TCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 233819 Query 19366 GTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCT 19425 | |||| || | || |||| ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 233820 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 233879 Query 19426 GCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCT 19485 |||||||| |||||||| || | || ||||| || ||| ||||||||| |||||| Sbjct 233880 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCT 233939 Query 19486 CTACATTTCTTTTTGGCTGCTTGGCCTGTGGT 19517 |||||||||| || |||||||||||||| || Sbjct 233940 TTACATTTCTTCTTAGCTGCTTGGCCTGTAGT 233971 >seq32525 Length=219324 Score = 354 bits (392), Expect = 2e-93 Identities = 495/683 (72%), Gaps = 12/683 (2%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| ||||||| || || || |||||||| || || |||||||| || Sbjct 125563 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 125622 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 |||||||| | | | | || ||| | ||| || ||||| || || |||||||| || Sbjct 125623 ATGATTCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTTATTGCTGCCCC 125681 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || ||||||||| | || ||| |||||||||||||| Sbjct 125682 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 125741 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 ||||| || || ||| | |||| | | || || || || | ||||| || || Sbjct 125742 TATCATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAGGTTTGCACTTTTATCCT 125799 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 ||||||| ||| || ||||||||||| | |||||||| || || | |||| | Sbjct 125800 ATTTGGGGAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATT 125859 Query 19021 GTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCT 19078 || | |||||| | |||| || || ||| |||||||| || |||||||||||||| | Sbjct 125860 GTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGGCGTGAGTGGGAACTTAGTT 125917 Query 19079 ATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCT 19138 ||| | || ||||| ||||||||| |||||| || |||||||||||||| || || Sbjct 125918 TTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTA 125977 Query 19139 CTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGG 19198 |||| || || | ||||||| ||||||| || |||| || | ||||||| | | Sbjct 125978 CTGCTGTTTTTTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAG 126037 Query 19199 GTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGC 19258 | ||| | ||| ||||| | ||| ||||||| |||||| | ||||| || || |||| Sbjct 126038 GAATTTCAGATACTTTCAATTTTATGATTGTATTTCAGGCTAAGCATAATATTCTTATGC 126097 Query 19259 ACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGC 19318 | || || |||||| | ||||| |||||||| |||||||| || ||||| ||||| ||| Sbjct 126098 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGT 126157 Query 19319 ACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAAC 19377 | ||||| |||| || | | | ||| | | ||||| || ||| | | |||| || Sbjct 126158 ATGGTTC-CTTGGTAACTTTTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAAT 126216 Query 19378 TATGGCTACAAGTTTGGGCAAGA 19400 | || |||| ||||| ||||| Sbjct 126217 GAAGGTTACAGATTTGGTCAAGA 126239 >seq646 Length=2337744 Score = 80.6 bits (88), Expect = 8e-11 Identities = 101/135 (75%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 18950 ACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGT 19009 |||| || || ||||||||||| | || ||||||||||| | |||||||| || || | Sbjct 1979624 ACTTTTATCCTATTTGGGAAGCGACATCTGTTGATGAATGGTTATACAACGGCGGTCCTT 1979683 Query 19010 TCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTG 19067 |||| | || | |||||| | |||| || || ||| |||||||| || ||||| Sbjct 1979684 ATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGGCGTGAGTG 1979741 Query 19068 GGAACTTAGCTATCG 19082 ||||||||| | ||| Sbjct 1979742 GGAACTTAGTTTTCG 1979756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141093202369860