Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq21796 93.3 3e-14 seq32646 89.7 4e-13 seq3517 89.7 4e-13 seq21071 86.0 5e-12 seq25741 84.2 2e-11 >seq21796 Length=372373 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| |||||||| ||| | || || | Sbjct 99089 ATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 99148 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| || ||| ||||||||||| | || || ||| Sbjct 99149 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCAA 99208 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| |||||||| | |||||| ||| ||| ||||||||| Sbjct 99209 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAAC 99268 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || |||||||||||||| || || || || Sbjct 99269 ATCCAAAAAGAATCTACCCTCCACTTGGT 99297 >seq32646 Length=539585 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || |||| || |||||||||||| |||| ||| | Sbjct 529049 ATGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 528990 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | |||||| || ||| ||||| || || | || ||||| Sbjct 528989 GATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAG 528930 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 |||||||| |||| ||| || | |||||||||||| | || ||| |||||||| Sbjct 528929 CAAAGGCTCATTTTTGCTGGGAGGCAATTAGAAGATGGTCGTACCTTGGCAGATTACAAT 528870 Query 106440 ATACAAAAAGAATCTAC 106456 || || || ||||| || Sbjct 528869 ATTCAGAAGGAATCCAC 528853 >seq3517 Length=1029689 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || ||||| ||||| ||||||||||| ||| | || ||| || | Sbjct 705982 ATGCAGATATTCGTGAAAACTTTGACCGGCAAGACCATCACCCTTGAGGTGGAATCCTCC 706041 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || ||| || ||| ||||| ||||| | || ||| || Sbjct 706042 GACACCATTGACAACGTAAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAG 706101 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || ||||| | |||||| |||||| | || ||| | || | | |||||||||| Sbjct 706102 CAGAGACTTATCTTTGCGGGTAAACAACTTGAGGATGGTCGCACCCTTGCCGATTACAAC 706161 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || ||||| ||||| || || ||| Sbjct 706162 ATCCAAAAGGAATCAACCCTCCAT 706185 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || ||||| ||||| ||||||||||| ||| | || ||| || | Sbjct 701581 ATGCAGATATTCGTAAAAACTTTGACCGGCAAGACCATCACCCTTGAGGTGGAATCCTCC 701640 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || ||| || ||| ||||| ||||| | || ||| || Sbjct 701641 GACACCATTGACAACGTAAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAG 701700 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || ||||| | |||||| |||||| | || ||| | || | | ||||||||| Sbjct 701701 CAGAGACTTATCTTTGCGGGTAAACAACTTGAGGATGGTCGCACCCTTGCTGATTACAAC 701760 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || ||||| ||||| || || ||| Sbjct 701761 ATCCAAAAGGAATCAACCCTCCAT 701784 >seq21071 Length=2748687 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || |||| || |||||||||||| |||| ||| | Sbjct 2708473 ATGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 2708414 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | |||||| || ||| ||||| ||||| | || ||||| Sbjct 2708413 GATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAAGGTATCCCTCCAGATCAG 2708354 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || || ||||| |||||| | || ||| |||||||| Sbjct 2708353 CAGAGGCTCATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGATTACAAT 2708294 Query 106440 ATACAAAAAGAATCTAC 106456 || || || ||||| || Sbjct 2708293 ATTCAGAAGGAATCCAC 2708277 >seq25741 Length=849835 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| |||||||| ||| | || || | Sbjct 274578 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 274637 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| || ||| ||||||||||| | || || ||| Sbjct 274638 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 274697 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || ||||| | |||||| ||| ||| ||||||||| Sbjct 274698 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 274757 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || ||||||||||| || || || || Sbjct 274758 ATCCAGAAAGAATCTACCCTCCACTTGGT 274786 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| |||||||| ||| | || || | Sbjct 296636 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 296577 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| || ||| ||||||||||| | || || ||| Sbjct 296576 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 296517 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || ||||| | |||||| ||| ||| ||||||||| Sbjct 296516 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 296457 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || ||||||||||| || || || || Sbjct 296456 ATCCAGAAAGAATCTACCCTCCACTTGGT 296428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402166954487360