Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_028853.1 Length=50078 Score E Sequences producing significant alignments: (Bits) Value seq8947 475 1e-129 >seq8947 Length=11118 Score = 475 bits (526), Expect = 1e-129 Identities = 745/1055 (71%), Gaps = 11/1055 (1%) Strand=Plus/Plus Query 38592 AATATTATTTGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTC 38651 ||||||| |||||| | ||| || | |||||||||| ||| | ||| || | | Sbjct 251 AATATTAATTGTAGTAATTCAGACTTCATCTGACAGTTACCCATAA-AAAGGACATCGGC 309 Query 38652 TGTCAGATTAA-TTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAG 38710 ||||||||||| |||||||| ||||| |||| |||||| || ||||||||||| Sbjct 310 TGTCAGATTAAATTTGAGCT-AAATTTTTTTGAGCCCAAACTACCTTACCATCAAGTAAC 368 Query 38711 GTTGCCATCGGTGTTCTGCCACAGCACATTTTTCCTTGATGTGTTCGATGGTGATTATAA 38770 ||| |||||| || | ||||| ||||||||||||||||| || || | | ||| || Sbjct 369 GTTTGCATCGGGGTACGCCCACAACACATTTTTCCTTGATGAGTACGCTCATTATTGTAG 428 Query 38771 TACATTAACCACTCATCTAAATCCGCTTGTAATGTCGTTAAATCCG--TATAAATTTTCT 38828 | ||||||| |||| || | || || | | || | |||| | || | Sbjct 429 AAGTTTAACCAAATGTCTAGGTCAGACTGCAACTGC--TCAAGCGAACTATACAGATTTT 486 Query 38829 TCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATAC 38888 | ||||| | |||||||||||| || || || || |||||||| ||||| ||||| |||| Sbjct 487 TTCTAAACGTCACTTGGTAAAACTCCTGCAAAATCGTTTTATGAAACCGCTCGCAAATAC 546 Query 38889 CATTCGTCTGGGGATGCTTCA-CTTTCGTTTTCGTATGCTCTATGTCATTTATCGCTAAA 38947 |||| || ||||| || | ||||||| || ||||| || || ||||| || |||||| Sbjct 547 CATTGGTTTGGGG-TGAGCGAGCTTTCGTCTTGGTATGTTCGATATCATTAATGGCTAAA 605 Query 38948 TAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAAT 39007 || || || ||||| || ||||||||||| |||||||| || | |||| || ||||| Sbjct 606 TACAGTTCGTAATCATGGTTTTCTACCTTACCACAATACTCTGTGCCTCTATCGGTTAAA 665 Query 39008 ATGCGTAACATCGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCATTCAGCATA 39067 || | | ||| || ||| | || || | || | ||||| || |||||||| || ||| Sbjct 666 ATTCTCAGCATTGGCAAATCATGCTCTTGATAGAACGGTAATACCTTATCATTAAGTATA 725 Query 39068 TCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAA-ACGCCACTTTACTGTA 39126 || || | | |||| | ||| || | ||||| || |||||| ||||| || || || Sbjct 726 TCGGCTGAAGTGATTGGGGTTTTGGTGGTATACAG-CTTGCAATGAGCCACCTTGCTATA 784 Query 39127 AGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAA 39186 |||||| | || || || |||||||| || || || ||||| | || ||||||||||| Sbjct 785 AGTATCTACGAAGGTCTGCTGATAAATGCGTCCTACGCCTTTTAAATTACCCACATAGAA 844 Query 39187 AGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCACCACAGGCAATCTC 39246 |||||||| ||||||||||||||||| || | ||||| |||||||||||||| || || Sbjct 845 GGTATCTTGCGAGCCAAGATAGCCAGGATGAGCGGTTTCGATTTCACCACAGGCGATGTC 904 Query 39247 ATCTTCTTTCTTACGCTCTAAGGCTTGTACCTGTGTTTCACTGAGTATAATACCTTGTTC 39306 ||||||||| || ||| | ||| || |||| || |||| ||||| || | Sbjct 905 ATCTTCTTTTTTCTTCTCAAGGGCGACAACTTGTGATTTGGTGAGAATAATGCCATCAGT 964 Query 39307 TGCAACCAGTTTTTCCAGGGCGATTAATCTTTGCTTAAAATTGGCAAGATGATGACGTAA 39366 ||| || | ||| ||||| | | | || | || || | || | || |||| Sbjct 965 TGCTACTTTGTCTTCTAGGGCTTTGAGACGTTTTCTGAAGTTCTCTAGGTCATTGCGTAG 1024 Query 39367 CCAAATCGAACGTACACCTCCTGCTGAAACAAAGATGCCTTGTTTACGGAGTTCCTTACT 39426 ||| || ||||| || || | | ||| || || | || |||| || ||||| || Sbjct 1025 CCAGATTGAACGAACGCCACTGGGTGAGACGAATACACCAAGTTTGCGTAGTTCATTGGA 1084 Query 39427 CACTCTTACCTGTCCAAATGCCGGGTTATCAAGAGCAAACTTCACAACAGCTTGCTCTAT 39486 |||| || |||||| | || |||| |||| ||| |||| | ||||| | || | Sbjct 1085 TGCTCTGACTTGTCCATACGCTGGGTAGTCAATGGCATACTTGATGACAGCGTCTTCGGT 1144 Query 39487 TGCCTCATCAACACGATTTTTTAAGTTGGGAACGCGTCTATTTTGATTCAGCAATGCTTC 39546 |||||||| || || ||||| | ||||| || ||||| | || | | || || Sbjct 1145 GGCCTCATCCACTCGGTTTTTAAGATTGGGTACTCGTCTTGAACGGTTGATTAGGGCATC 1204 Query 39547 AACACCACCTTGCTCAACCGCTTGTTGATAACGATAGAATGTATCTCGGCTCATTCCCAT 39606 ||||| |||||||| || || ||| ||||| ||||| |||||||| | ||||| Sbjct 1205 GACACCGCCTTGCTCCGCCATTTCTTGGTAACGGTAGAAGGTATCTCGTGATACACCCAT 1264 Query 39607 TACTTTGCAGGCTTGAGAAATATTACCCAGTTCTT 39641 ||||||||||||| || | ||| |||||||| Sbjct 1265 GACTTTGCAGGCTTTGGATACATTTTGCAGTTCTT 1299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160064926581600