Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq10304 93.3 3e-14 seq6922 89.7 4e-13 seq19384 84.2 2e-11 >seq10304 Length=1623844 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | || || | |||||| ||||| ||||| ||| Sbjct 849897 TGAGCAATCATGCATGTCAAAAGGGCATAAGATGCAATATTAAATGGAACGCCCAGGCCC 849838 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || |||| ||| |||| ||| || || | |||||||| ||| ||||||||||| Sbjct 849837 ATGTCAGCAGATCGCTGATACATTTGACATGATAACTCCCCGTGTGCTACATAAAACTG 849779 >seq6922 Length=1215094 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| |||||| | || || | |||||| || |||||||| ||| Sbjct 296657 TGAGCAATCATGCATGTCAGGAGCGCATAAGATGCAATATTAAATGGGACACCCAGGCCC 296716 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || |||| ||| |||| ||| || || |||||||| ||||| ||||| ||||| Sbjct 296717 ATGTCGGCAGATCGCTGATACATTTGACATGATAGCTCCCCATTTGCTACATAGAACTG 296775 >seq19384 Length=1547856 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | || || | |||||| |||| ||||| ||| Sbjct 820147 TGAGCAATCATGCATGTCAAAAGGGCATAAGATGCAATATTAAATGGAATGCCCAGGCCC 820088 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 || || || |||| ||| |||| ||| || || | |||||||| ||| ||||||||||| Sbjct 820087 ATATCAGCAGATCGCTGATACATTTGACATGATAACTCCCCGTGTGCTACATAAAACTG 820029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414309243867880