Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq25741 93.3 3e-14 seq21796 86.0 5e-12 >seq25741 Length=849835 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || ||||| || || ||||||||||| |||| ||| || |||||| Sbjct 274103 CACCAAGTGGAGGGTAGATTCCTTCTGGATATTGTAATCAGCCAAGGTTCTGCCATCTTC 274044 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | || || || ||| | |||||||||||||||||| || | || |||||||| Sbjct 274043 TAGCTGCTTTCCTGCAAAGATAAGCCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTG 273984 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 ||| || || |||| | | | || || | | | || | ||| || || || Sbjct 273983 AATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATTGTCTT 273924 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || |||||||| |||| ||| ||||||||| Sbjct 273923 TCCGGTCAATGTCTTAACAAAGATTTGCATT 273893 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || ||||| || || ||||||||||| |||| ||| || |||||| Sbjct 296883 CACCAAGTGGAGGGTAGATTCCTTCTGGATATTGTAATCAGCCAAGGTTCTGCCATCTTC 296942 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | || || || ||| | |||||||||||||||||| || | || |||||||| Sbjct 296943 TAGCTGCTTTCCTGCAAAGATAAGCCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTG 297002 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 ||| || || |||| | | | || || | | | || | ||| || || || Sbjct 297003 AATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATTGTCTT 297062 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || ||||| || |||| ||| ||||||||| Sbjct 297063 TCCGGTCAAGGTCTTAACAAAGATTTGCATT 297093 >seq21796 Length=372373 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || ||||||||||| || |||||||| |||| ||| | |||||| Sbjct 99298 CACCAAGTGGAGGGTAGATTCTTTTTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTC 99239 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 | |||||||| ||| | || ||||| ||||||||| || | ||||||||||| Sbjct 99238 AAGCTGTTTGCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGGATACCTTCTTTGTC 99182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409495190781030