Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq2977 244 7e-60 >seq2977 Length=32283 Score = 244 bits (270), Expect = 7e-60 Identities = 770/1186 (65%), Gaps = 14/1186 (1%) Strand=Plus/Plus Query 58576 CCAGACGTAATCGCCGGTTAGGTTGATGTGCTCCCAGCCCAGCGGCGACAGGAATTGCAG 58635 ||||| |||||||| || | || || |||||||| ||||| || |||||| | || || Sbjct 2561 CCAGAGATAATCGCCAGTCAAATTAATATGCTCCCAACCCAGTGGTGACAGGTACTGAAG 2620 Query 58636 CAGCTCGCCGTC--CACCGGCTTGCCGGCCTCGAC-CAACCCCTGGGTGGCGCGTTCCAG 58692 | ||| || || | |||| | | | |||| | | || || || | Sbjct 2621 ATG---GCCATCATCAATTACCTGCCCTTGTTGTCGCAACGCATTCACCGCTCGCTCAAT 2677 Query 58693 GTACACCGTGTTCCACAGCACGATAGCCGCCGTCACCAGGTTGAGGCCGCTGGCCCGGTA 58752 |||||||| ||||||||||| || || ||||| | || || | || || || || || Sbjct 2678 ATACACCGTATTCCACAGCACAATCGCTGCCGTAATCAAATTTAAACCACTAGCTCGATA 2737 Query 58753 GCGCTGCTGCTCGAAGCTCCGATCCCTGATTTCCCCAAGGCGGTTGAAGAACACCGCCCT 58812 ||||| |||||||| | |||| | ||||| || | || || |||||||| || | Sbjct 2738 ACGCTGGTGCTCGAAAGTATGATCACGCATTTCACCCAACCGATTAAAGAACACTGCACG 2797 Query 58813 GGCCAGCGAGTTGCGCGCCTCACCTTTGTTCAGGCCGGCATGCACGCGGCGGCGCAGTTC 58872 |||| | ||||| || ||||| || || | || || ||||| || || || ||||| Sbjct 2798 AGCCAAAGCATTGCGAGCTTCACCCTTATTTAACCCTGCTTGCACCCGTCGACGTAGTTC 2857 Query 58873 AACACTTTGCAGCCAGTCCAGGATGAACAGCGTGCGCTCGATCCGGCCCAGCTCGCGCAG 58932 |||||| ||||| | | ||||| | |||| ||||| || || | ||| || | Sbjct 2858 TTTACTTTGTAGCCATTGTAAAATGAATAAACTGCGTTCGATACGACCAATCTCTCGTAA 2917 Query 58933 GGCCACGGCCAGTCCGTTCTGGCGCGGGTAGCTGCCGAGCTTGCGCAGCATCAGCGAGGC 58992 || | || || | || || | || ||||| || || || | || ||| || || Sbjct 2918 TGCTAGTGCTAGGCTATTTTGCCTTGGATAGCTACCAAGTTTCTTAACCAGCAGGGAAGC 2977 Query 58993 GGTGACGGTGCCCTGCTTGATCGAGCTGGCCAGGCGCAGGATGTCGTCCCAGTGGGC--- 59049 || | |||| || || || || | |||| || |||| | ||| | | Sbjct 2978 CGTTGCTATGCCTTGTTTAATTGAAGTAGCCAATCGTAGGACAGCTGACCAATTTTCCTC 3037 Query 59050 ACGCACGTGCTTGATGTTCAGGGTGCCGCCGATCAGCGGGCGCAACGTCGGGTAGGCTTG 59109 | ||| |||| | || | ||||| || || | || | | | ||||| | | Sbjct 3038 AATCAC---CTTGGTATTGATTGTGCCACCAATGATAGGCTTAAGCATGGGGTAAGAATT 3094 Query 59110 CACGCCCTGCGGCACGTACAGCTTGGTTTCGCCGAGGTCGCGGATGCGCGGCGCGAAGCG 59169 |||| | || | | || |||||||| || || || || || || || ||||| Sbjct 3095 ATCGCCTTTTGGGATAAATAGTTTGGTTTCACCCAGATCTCGAATCCGAGGGGCGAATTT 3154 Query 59170 GAAGCCTAGCAGGTGCATCAGGGCAAAGACGTGATCGGTGAAGCCGGCCGTGTCGGTGTA 59229 || | |||| |||||||| |||||| || || ||||| || || || || |||||||| Sbjct 3155 AAACTCCAGCAAGTGCATCAAGGCAAACACATGGTCGGTAAAACCTGCGGTATCGGTGTA 3214 Query 59230 GTGCTCCTCGATCCGCAGGTCGGACTCGTGGTACAGCAGGCCGTCGAGCACATAGGTGGA 59289 || || || | | || || || || || ||||||| || || | |||||||| || Sbjct 3215 ATGTTCTTCCACCTTCAAATCTGATTCATGATACAGCAACCCATCCAATACATAGGTTGA 3274 Query 59290 ATCGCGGACGCCGACATTCACCACGCGGGTGCTGAACGGCGC-GTACTGGTCGGAGATAT 59348 || || | || ||||| | || || |||| | || ||| ||||| || | || Sbjct 3275 CTCTCGAATACCCACATTAATCA-GCTTACTATGAAACGGGCTGTATTGGTCAGAAACAT 3333 Query 59349 GGGTATAGAACAGCCGTCCCGGCTCGCTACCGTACTTCGGGTTGACGTGCCCGGTGCTCT 59408 ||||||||| || | || || || ||| ||||| ||||||| ||||| ||||| | Sbjct 3334 GGGTATAGACAAGTCTGCCAGGTTCTGAACCATACTTTGGGTTGATATGCCCTGTGCTTT 3393 Query 59409 CGCCCCGGCCACCCGCGCGGAAGCGCTGGCCATCGGAGGATGAGGTCGTGCCGTCGCCCC 59468 | | || || || || ||||| || ||||| || |||||||| || || ||||||| Sbjct 3394 GGGCACGACCGCCTGCTTTAAAGCGTTGCCCATCTGAAGATGAGGTTGTACCATCGCCCC 3453 Query 59469 AGTGGGCGGCAAAGGCGTGGCGATACTGGTGGTTGACCAGCTCGGCCAAGGCCGCCGAAT 59528 ||| |||||| | | | | ||| || ||| | | | || | || || Sbjct 3454 AGTTATGTGCAAAGTCATTGGTCAATTGGGCATTCGTAAGCACACCGAGTGCTGACGCAT 3513 Query 59529 AGGTTTCGTCGCGGATGTGCCAGGCTTGCAGCCAGGACAGCTTGGCGTAGGTCAGGCCGG 59588 |||||||||| ||||| | ||| ||||| ||||| | || || | | ||| || | Sbjct 3514 AGGTTTCGTCACGGATATACCACGCTTGTAGCCAAGCAAGTTTAGATTCGGTGGCACCAG 3573 Query 59589 GGCTCGACTCGGCCATCTTGGTCAGCCCGAGGTTGATCGCATCACCGAGGATTGCGGACA 59648 ||| || || ||||| ||| | | || | || || |||||| | || | || | Sbjct 3574 GGCAGGATTCTGCCATTTTGCTATGTCCTAAATTAATGCCATCACTTAAAATGGTGGCAA 3633 Query 59649 GCAGCAACGTCCTGTCTTTGGCCTCGGCCCCGTCCTTCAAGTGGGTGAAGTGGCGGCTGA 59708 | || | | |||||||| | | || |||||||| || || ||| | Sbjct 3634 GAAGTAGGTATTTATCTTTGGCTGTTTCATCTGTTTTTAAGTGGGTAAACTGATTGCTAA 3693 Query 59709 AGCCCGTCCAGTCGTCCACGTCCATCAGCAGTTCGGTGATCTTGAT 59754 | || ||||| || || || |||| |||| ||| |||||||| || Sbjct 3694 ACCCTGTCCACTCATCAACTTCCAAAAGCAATTCAGTGATCTTAAT 3739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330765430896220