Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 >seq7 Length=127721098 Score = 86.0 bits (94), Expect = 5e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || | |||| ||| ||||||||||||||||| || || Sbjct 39037724 ACATGAGCAATCATGCATGTCAGGAGAGCATAAGATGCAATGTTAAATGGCACACCCAAG 39037783 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 ||||||||||| || | ||||||| ||| || || Sbjct 39037784 CCCATATCAGCAGAGCGCTGATACATTTGGCAAGA 39037818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360919149073169