Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq11 125 1e-23 seq10 118 2e-21 seq7 118 2e-21 seq2 105 1e-17 seq12 87.8 3e-12 >seq11 Length=105699404 Score = 125 bits (138), Expect = 1e-23 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | ||||||||||| || || | ||| ||||| Sbjct 76982804 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACAATCACCTTGGAGGTTGAAAGCTCC 76982863 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| |||| || || ||||| ||||| ||||| || ||||||||||| Sbjct 76982864 GATACCATTGACAATGTTAAGGCA-AAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 76982922 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| || ||||| || |||||||| || ||| | | || || | |||||||| Sbjct 76982923 GCAAAGGCTCATCTTTGCCGGCAAACAATTGGAAGATGGGAGGACTTTGGCTGATTATAA 76982982 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| ||||| || || | || | ||| | ||| | || ||||| Sbjct 76982983 CATTCAGAAAGAGTCTACCCTTCACCTTGTTCTTCGTCTCCGTGGTGG 76983030 >seq10 Length=114683840 Score = 118 bits (130), Expect = 2e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 |||||| || ||| | || || | || || |||||||| || | ||| | || ||| Sbjct 38466907 AATGCAGATTTTTGTGAAAACTTTGACTGGAAAAACTATCACATTGGAGGTGGAGAGCTC 38466966 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 | || |||||| |||| | || || || |||||||| || ||||| |||||||| | Sbjct 38466967 A-GACACAATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 38467025 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||| | |||||||| ||||| || | |||||| | | || | | ||||||| Sbjct 38467026 AGCAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGAGGACCCTTGCGGATTATA 38467085 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || ||||| ||||| || ||||||||||||| || | ||||| || || Sbjct 38467086 ACATCCAAAAGGAATCGACCCTGCATTTGGTTTTGCGACTTCGAGGAGGGAT 38467137 Score = 118 bits (130), Expect = 2e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 |||||| || ||| | || || | || || |||||||| || | ||| | || ||| Sbjct 38472619 AATGCAGATTTTTGTGAAAACTTTGACTGGAAAAACTATCACATTGGAGGTGGAGAGCTC 38472678 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 | || |||||| |||| | || || || |||||||| || ||||| |||||||| | Sbjct 38472679 A-GACACAATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 38472737 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||| | |||||||| ||||| || | |||||| | | || | | ||||||| Sbjct 38472738 AGCAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGAGGACCCTTGCGGATTATA 38472797 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || ||||| ||||| || ||||||||||||| || | ||||| || || Sbjct 38472798 ACATCCAAAAGGAATCGACCCTGCATTTGGTTTTGCGACTTCGAGGAGGGAT 38472849 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || || || | ||| | ||| | Sbjct 38465996 ATGCAGATCTTTGTGAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTAGAAAGTTCT 38466055 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || |||| | || ||||| ||||| |||||||| || || ||||| ||| Sbjct 38466056 GATACTATCGATAATGTCAAGGCTAAAATCCAAGACAAAGAAGGGATCCCTCCTGACCAA 38466115 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| ||||| ||||||||| | |||||| | ||||| | | || || ||| Sbjct 38466116 CAAAGGCTTATCTTTGCCGGAAAACAACTCGAGGATGGCCGAACTCTTGCCGACTACAAT 38466175 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || | || | ||| || | ||||| || Sbjct 38466176 ATCCAAAAGGAGTCCACCCTCCACCTAGTGCTTCGTCTAAGGGGTGGCAT 38466225 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || || ||||| ||| | || |||| | Sbjct 38466680 ATGCAAATTTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAAGTTGAGAGTTCT 38466739 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||||| || || || || || ||||| || ||||| ||||| Sbjct 38466740 GACACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCAG 38466799 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | |||||||| || ||||| | || ||| || | ||| | | |||||||||| Sbjct 38466800 CAGAGGTTGATTTTTGCTGGCAAACAGCTCGAAGATGGTAGGACACTTGCAGATTATAAT 38466859 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || || | || ||||| | || | || ||||| || Sbjct 38466860 ATCCAGAAAGAGTCTACCCTTCACTTGGTGCTCCGACTGCGTGGTGGAAT 38466909 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || || || || || | ||| | ||| | Sbjct 38471480 ATGCAGATCTTTGTGAAAACCCTTACTGGTAAGACCATCACCCTTGAGGTAGAAAGTTCT 38471539 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || |||| | || ||||| ||||| |||||||| || || ||||| ||| Sbjct 38471540 GATACTATCGATAATGTCAAGGCTAAAATCCAAGACAAAGAAGGGATTCCTCCTGACCAA 38471599 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| ||||| ||||||||| | |||||| | ||||| | | || || ||| Sbjct 38471600 CAAAGGCTTATCTTTGCCGGAAAACAACTTGAGGATGGCCGAACTCTTGCCGACTACAAT 38471659 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || | || | ||| || | ||||| || Sbjct 38471660 ATCCAAAAGGAGTCCACCCTCCACCTAGTGCTTCGTCTAAGGGGTGGCAT 38471709 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || || ||||| ||| | || |||| | Sbjct 38472392 ATGCAAATTTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAAGTTGAGAGTTCT 38472451 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||||| || || || || || ||||| || ||||| ||||| Sbjct 38472452 GACACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCAG 38472511 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | |||||||| || ||||| | || ||| || | ||| | | |||||||||| Sbjct 38472512 CAGAGGTTGATTTTTGCTGGCAAACAGCTCGAAGATGGTAGGACACTTGCAGATTATAAT 38472571 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || || | || ||||| | || | || ||||| || Sbjct 38472572 ATCCAGAAAGAGTCTACCCTTCACTTGGTGCTCCGACTGCGTGGTGGAAT 38472621 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || ||||| || || | ||| | ||| Sbjct 38459540 ATGCAGATCTTTGTGAAAACCCTTACTGGTAAAACCATCACCCTTGAGGTGGAAAGCTCC 38459599 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | || ||||| ||||| |||||||| || || || || ||| Sbjct 38459600 GATACTATTGATAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCAA 38459659 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||||||||| ||||||||| | |||||| | ||||| | | || || || Sbjct 38459660 CAGAGGCTTATTTTTGCCGGAAAACAACTCGAGGATGGCCGAACTCTTGCCGACTACAAC 38459719 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || | || | ||| || | ||||| || Sbjct 38459720 ATCCAAAAGGAGTCCACCCTCCACCTAGTCCTTCGTCTAAGGGGTGGCAT 38459769 Score = 102 bits (112), Expect = 1e-16 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | ||||| | || || || || || ||| |||| | || ||| Sbjct 64670998 ATGCAGATCTTCGTCAAGACTTTGACCGGTAAGACGATTACTTTAGAAGTGGAGAGCTCG 64670939 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| ||| ||||| || |||||||| || ||||| ||||| Sbjct 64670938 -GATACGATTGATAACGTGAAAGCGAAGATTCAGGACAAAGAAGGAATTCCACCAGATCA 64670880 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||| || |||||| | || || | | || || | ||||| || Sbjct 64670879 GCAAAGGTTGATTTTTGCTGGGAAACAACTGGAAGACGGAAGGACTTTGGCTGATTACAA 64670820 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||||||| || || ||| | || | ||| | ||| | || ||||| Sbjct 64670819 TATTCAAAAGGAGTCCACTCTTCACCTTGTTCTTCGTCTTCGTGGTGG 64670772 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| ||||| | ||||| | || || ||||| || || | ||| | || ||| Sbjct 38472848 ATGCAGATATTCGTGAAGACCTTGACCGGTAAAACCATCACCCTGGAGGTCGAGAGCTCG 38472907 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| ||||||||| || || || || || || || || || Sbjct 38472908 -GACACCATTGACAATGTGAAAGCGAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCA 38472966 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | |||||||| ||||| || | |||||| | | || | | |||||||| Sbjct 38472967 GCAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGAGGACCCTTGCGGATTATAA 38473026 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || ||||||||||||| || | ||||| || || Sbjct 38473027 CATCCAAAAGGAATCGACCCTGCATTTGGTTTTGCGACTTCGAGGAGGGAT 38473077 Score = 89.7 bits (98), Expect = 8e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| ||||| | ||||| || || || ||||| |||| | ||| | || ||| Sbjct 38460452 ATGCAGATATTCGTTAAGACCCTGACTGGTAAAACCGTAACACTGGAGGTCGAGAGCTCG 38460511 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| ||| ||||| || || || || || || || || || Sbjct 38460512 -GACACCATTGACAATGTTAAAGCGAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCA 38460570 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | |||||||| ||||| || | |||||| | | || | | || ||||| Sbjct 38460571 GCAGAGGTTGATTTTTGCCGGAAAGCAGCTTGAGGATGGGAGGACGCTTGCGGACTATAA 38460630 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 || ||||| ||||| || ||||||||||||| || Sbjct 38460631 CATCCAAAAGGAATCCACCCTGCATTTGGTTTTGCG 38460666 >seq7 Length=127721098 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || ||||| ||| ||||| ||||| Sbjct 86220616 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACTATCACTCTAGAGGTTGAAAGTTCA 86220675 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| |||| || || |||||||| || ||||| || ||||| || || Sbjct 86220676 GACACCATTGACAATGTTAAGGCA-AAGATTCAAGACAAGGAAGGGATCCCACCAGACCA 86220734 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| || ||||| || || ||| | || ||| | | ||||| | |||||||| Sbjct 86220735 GCAAAGGCTCATATTTGCTGGCAAGCAACTTGAAGATGGCAGGACATTGGCTGATTATAA 86220794 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||| ||||| || || ||| ||||| | || | || | || |||||| Sbjct 86220795 TATCCAAAAGGAGTCTACTCTGCATCTTGTCCTTCGCCTTCGCGGTGGT 86220843 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||| | ||| | ||||| || ||||| || ||||| || | || |||| | Sbjct 44509726 ATGCAAGTTTTTGTGAAGACCCTCACAGGAAAGACTATTACCTTGGAAGTTGAGAGTTCT 44509667 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| || || || || || |||||||| ||||| |||||| Sbjct 44509666 GATACGATTGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGTATTCCACCGGATCAA 44509607 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| |||||||| || || || | |||||| | | || | | ||||||||| Sbjct 44509606 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAGGATGGGAGGACCCTTGCTGATTATAAT 44509547 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| ||||| | || ||||| | || | || ||||| || Sbjct 44509546 ATTCAGAAAGAGTCAACCCTCCACTTGGTGCTTCGCCTGCGTGGTGGAAT 44509497 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || || || || || | ||| | || Sbjct 86220160 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACAATTACCTTGGAGGTGGAGAGTTCG 86220219 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | ||| || ||||| || |||||||| || ||||| || ||| Sbjct 86220220 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAAGAAGGAATCCCACCAGACCAA 86220279 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | |||||||| ||||||||| | || ||| | | || | | ||||||||| Sbjct 86220280 CAAAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGGACTCTTGCCGATTATAAT 86220339 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || ||| | ||||||||| | || | || |||||||| Sbjct 86220340 ATCCAGAAGGAGTCTACTCTCCATTTGGTTCTCCGCCTTCGTGGTGGTAT 86220389 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || ||||| || || || | || | ||| Sbjct 44510182 ATGCAAATATTTGTCAAAACTCTTACTGGCAAGACAATCACCCTTGAAGTGGAAAGCTCC 44510123 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| |||| | || || || ||||| ||||||||||| || ||||| ||| Sbjct 44510122 GACACAATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCTGACCAA 44510063 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| ||||||||||| |||||| | || || | | || || || Sbjct 44510062 CAGAGGCTTATCTTTGCTGGAAAACAATTGGAGGATGGCCGCACCCTTGCTGACTACAAC 44510003 Query 124719 ATTCAAAAAGAATCAAC 124735 || || ||||| || || Sbjct 44510002 ATCCAGAAAGAGTCTAC 44509986 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||| ||||| || | ||| | ||| Sbjct 44543737 ATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACTATCACCCTTGAGGTGGAAAGCTCC 44543678 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || |||| | || || || |||||||||||||| || ||||| ||||| Sbjct 44543677 GACACCATCGATAATGTCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCACCAAATCAA 44543618 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| | || || |||| || |||| ||| | | || || || Sbjct 44543617 CAGAGGCTTATCTTTGCTAGTAAGCAGCTAGAATATGGTCGTACACTTGCTGACTACAAC 44543558 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || |||| ||||| | ||||| | ||||||| Sbjct 44543557 ATTCAGAAGGAGTCCACCCTGCACTTGGTCCTTCGTTTGAGGAGTGGTAT 44543508 Score = 96.9 bits (106), Expect = 5e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 |||||| |||||| | || || | || || ||||| || || | ||| | || ||| Sbjct 44509499 AATGCAGATATTTGTGAAAACTTTGACCGGTAAAACCATTACGTTGGAGGTGGAGAGCTC 44509440 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || || || |||| | || || || |||||||| || ||||| |||||||| | Sbjct 44509439 C-GACACGGTTGATAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 44509381 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 |||| ||| | |||||||| ||||| || | ||||| | | || | | || |||| Sbjct 44509380 AACAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAGGACGGGAGGACCCTTGCGGACTATA 44509321 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 | |||||||| || || || ||||||||||||| || Sbjct 44509320 ACATTCAAAAGGAGTCGACCCTGCATTTGGTTTTGCG 44509284 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || || || ||||| || || || | ||| ||||| Sbjct 44510410 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACAATCACCCTTGAGGTTGAAAGCTCC 44510351 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| |||| | || || || || ||||| ||||| || || ||||| ||| Sbjct 44510350 GACACAATTGATAATGTCAAGGCTAAGATCCAGGATAAGGAAGGGATCCCTCCTGACCAA 44510291 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| || || ||| | || ||| |||| || | | || || || Sbjct 44510290 CAGAGGCTTATCTTTGCCGGTAAGCAACTGGAAGATGGTCGCACCCTTGCTGACTACAAC 44510231 Query 124719 ATTCAAAAAGAATCAAC 124735 ||||||||||| || || Sbjct 44510230 ATTCAAAAAGAGTCTAC 44510214 Score = 89.7 bits (98), Expect = 8e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || || || || || ||| | ||| |||| || | Sbjct 44543037 ATGCAAATATTTGTTAAGACTCTTACCGGAAAGACCATTACTTTGGAGGTTGAGAGTTCA 44542978 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | || || || || || ||||| ||||| || || || || Sbjct 44542977 -GATACCATTGACAATGTCAAGGCTAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCA 44542919 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| ||| | || ||||| || || ||| | || ||| | || || | | ||||| || Sbjct 44542918 ACAGAGGTTGATCTTTGCCGGTAAGCAACTTGAAGATGGCCGCACTCTCGCTGATTACAA 44542859 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || | || ||||| | ||| | |||||||| Sbjct 44542858 CATCCAAAAGGAATCCACCCTCCACTTGGTGCTTCGTCTTTTTGGTGGTAT 44542808 >seq2 Length=101023042 Score = 105 bits (116), Expect = 1e-17 Identities = 159/223 (71%), Gaps = 16/223 (7%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AG--CA 124595 |||||||||||| | ||||| || || || ||||| || || | || |||| || || Sbjct 44353769 ATGCAAATATTTGTCAAGACCCTCACTGGAAAAACAATTACATTGGAAGTTGAGAGTTCA 44353828 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 ||| || ||| || | | ||| | |||||||| || ||||| ||||| || || Sbjct 44353829 AAT---ACTATTGATATTGTGAAAGACAAAATTCAGGAAAAAGAGGGTATCCCCCCCCCC 44353885 Query 124656 C------AAC----AAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATT 124705 | ||| |||| | |||||||||||| ||||| | |||||| | | || | Sbjct 44353886 CGGCCCAAACCAGTAAAGATTAATTTTTGCAGGAGAACAACTTGAGGATGGAAGGACTCT 44353945 Query 124706 AGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 | |||||||||||||||||||| |||||| | ||||||||| Sbjct 44353946 TGCTGATTATAATATTCAAAAAGAGTCAACTCTTCATTTGGTT 44353988 >seq12 Length=146008498 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || ||||||||||| || || |||||||| || ||| | |||||||| || || ||| | Sbjct 139210910 CAGGATAAAGAAGGCATCCCTCCTGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAACTG 139210851 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || ||| | ||||| ||| |||||||| || ||||| || || ||| | || | ||| Sbjct 139210850 GAAGATGGCCGAACCCTAGCTGATTATAACATCCAAAAGGAGTCCACTCTTCACCTAGTT 139210791 Query 124749 TTA 124751 ||| Sbjct 139210790 TTA 139210788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754743803299200