Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq10 122 1e-22 seq11 102 9e-17 seq6 102 9e-17 seq7 100 3e-16 seq12 89.7 6e-13 seq1 84.2 2e-11 >seq10 Length=114683840 Score = 122 bits (134), Expect = 1e-22 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | ||||| |||| ||| | || ||||| || ||||||||||| || Sbjct 64671000 CCACCTCGAAGACGCAGGACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 64671059 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||||| |||| || || ||||| || ||||| ||||| || |||||||| | ||| Sbjct 64671060 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 64671119 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || |||||||| |||||| ||| | ||| | | | |||||| |||| || Sbjct 64671120 ATGCCTTCCTTGTCTTGGATTTTGGCTTTCA-CGTTGTCGATCGTGTCAGAGCTC---TC 64671175 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| ||||| || || || || |||||||| || ||||||||||| Sbjct 64671176 GACCTCGAGAGTGATCGTCTTTCCGGTAAGCGTCTTAACGAAGATTTGCAT 64671226 Score = 107 bits (118), Expect = 2e-18 Identities = 151/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| |||| |||||| || |||||||| ||||| ||||| || | || |||| ||| Sbjct 38473279 ATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCCTCTAACTG 38473220 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||||||||| ||||| | | ||||||||| | || | | |||||||||| ||| ||| Sbjct 38473219 CTTACCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC-TGAATTT 38473161 Query 43100 TTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 43155 | | ||| | | | | |||||| |||| ||||| || | ||||| ||||| | Sbjct 38473160 TCGCTTTCACATTGTCGATCGTGTCTGAGCTC---TCCACCTCCAGGGTGATTGTTTTCC 38473104 Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||| || || || ||||| Sbjct 38473103 CGGTCAAGGTCTTCACGAATATCTGCAT 38473076 Score = 107 bits (118), Expect = 2e-18 Identities = 146/200 (73%), Gaps = 8/200 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || |||||||| |||| ||||| |||| || ||||| || || ||||| Sbjct 64671491 CTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCCTCAAGCTGTTTTCCGGCGAA 64671550 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || ||||| || |||||| || | ||| Sbjct 64671551 GATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCA-CGT 64671609 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| |||| || || |||| ||||| || ||||| ||||| |||| Sbjct 64671610 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTCT 64671666 Query 43168 TTACAAAGATTTGCATTTTT 43187 | || ||||| ||||| ||| Sbjct 64671667 TAACGAAGATCTGCATCTTT 64671686 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | ||||| |||||||||| || |||||||| || || ||||| || Sbjct 38473074 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38473015 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | | || || |||||||| ||||| || || | | ||||||||| | || Sbjct 38473014 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 38472955 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTC---GCTCGATTC 43132 | | |||||||||| ||| |||| | || | | | || | |||| |||| || Sbjct 38472954 ATCCCCTCCTTGTCC-TGAATTTTCGCTTTCACATTGTCAATGGTGTCCGAGCTC---TC 38472899 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||||||||| || || | ||||| || || || ||||| Sbjct 38472898 GACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 38472848 Score = 89.7 bits (98), Expect = 6e-13 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| |||| |||||| || |||||||| ||||| ||||| || | || || | ||| Sbjct 38467339 ATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCCTCCAACTG 38467280 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| ||||| ||||| | | ||||||||| | || | | |||||||||| ||| | | Sbjct 38467279 CTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC-TGAATCT 38467221 Query 43100 TTGTTTGAGCGTCGCCACCG-TGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 43155 | | || | | | || | |||| |||| || || || | ||||||||||| | Sbjct 38467220 TGGCTTTCACATTGTCAATGGTGTCCGAGCTC---TCGACCTCCAGGGTGATGGTTTTAC 38467164 Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||| || || || ||||| Sbjct 38467163 CGGTCAAGGTCTTCACGAATATCTGCAT 38467136 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/209 (70%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| ||| ||||| ||||||||||| || || | ||| || | || || | ||| Sbjct 38460883 ATGCAGAGTGGATTCCTTCTGAATATTGTAGTCTGCTAAAGTTCGACCATCCTCCAACTG 38460824 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| ||||| || || | | ||||||||| | || | | |||||||||| ||| | | Sbjct 38460823 CTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCC-TGAATCT 38460765 Query 43100 TTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 43155 | | ||| | | | | |||||| |||| ||||| || | ||||||||||| | Sbjct 38460764 TAGATTTCACATTGTCAATCGTGTCCGAGCTC---TCCACCTCCAGGGTGATGGTTTTCC 38460708 Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | ||||| || || || |||||| Sbjct 38460707 CAGTCAAGGTCTTCACGAATATCTGCATT 38460679 >seq11 Length=105699404 Score = 102 bits (112), Expect = 9e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || || |||||||| || ||||| |||| || ||||| || |||||||| Sbjct 76982538 TCTTTCTGGATGTTATAATCAGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAA 76982479 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||||| || | | |||||||| ||| || |||| ||| Sbjct 76982478 ATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 76982420 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || |||| || ||||| ||||| || || || || || Sbjct 76982419 GTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCAC 76982360 Query 43172 AAAGATTTGCATTTT 43186 |||||| ||||| || Sbjct 76982359 AAAGATCTGCATCTT 76982345 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| ||||| |||||||||| |||| | | || || | || || |||||||| Sbjct 76982766 TCCTTTTGGATATTATAATCAGCCAAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAG 76982707 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||| ||||| | || | | |||||||| ||| | || | | | ||| Sbjct 76982706 ATCAAACGCTGTTGGTCAGGTGGGATTCCTTCCTTGTCT-TGAATCTTGGCCTTAACGTT 76982648 Query 43113 GCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| ||| || || |||| |||||||| ||||| |||| || || Sbjct 76982647 GTCGATGGTGTCGGAACTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTT 76982591 Query 43169 TACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 76982590 GACAAAGATTTGCAT 76982576 >seq6 Length=121339338 Score = 102 bits (112), Expect = 9e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||| | ||| | ||| | ||| ||||| || || ||||| || || Sbjct 51785663 CCTCCCCTAAGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCT 51785722 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || |||| || |||||||| || || || ||||| ||||| ||||||| || Sbjct 51785723 AAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGG 51785782 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || |||||||| ||| || ||||| | | | |||||| || || || Sbjct 51785783 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACC 51785842 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 || | || ||||| || |||||||| || || || ||||||||||| ||| Sbjct 51785843 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTTT 51785893 >seq7 Length=127721098 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||||||||| || | || ||||||||| |||||||| || |||| |||| | Sbjct 86220602 CGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCCAATGTCCTACCA 86220543 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| ||||| || ||||| | |||||||| | || | | ||||||| Sbjct 86220542 TCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATACCCTCCTTG 86220483 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 || ||| ||| || | | | | || ||| ||| || || | |||||| Sbjct 86220482 TCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTGATG 86220423 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || |||||||||||||| ||||| Sbjct 86220422 GTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 86220388 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | ||||| |||||||||| || |||||||||||| || || || || Sbjct 44509272 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCA 44509331 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | |||| || |||||||| || || || || | | ||| ||||| | || Sbjct 44509332 AGGGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGG 44509391 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||| || ||| || || | | | |||||||| |||| ||| Sbjct 44509392 ATACCCTCCTTATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTC---TCC 44509448 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||| |||||||| || || | || || ||||| || |||||| Sbjct 44509449 ACCTCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCATT 44509499 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| ||||| || || || | || |||||||| || |||||||| Sbjct 44510447 CTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCTAGCTGTTTCCCAGCGAA 44510506 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||| ||||| | || | | |||||||| ||| || |||| | Sbjct 44510507 GATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 44510566 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| |||||| |||| |||||||| || || || || || ||||| Sbjct 44510567 ATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTTAC 44510626 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 44510627 AAAGATCTGCAT 44510638 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| ||||| || || || |||| || | |||||| ||||| || Sbjct 44509079 CTCCTTCTGGATATTGTAGTCAGCTAGGGTTCGACCGTCCTCCAACTGCTTCCCAGCAAA 44509138 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | |||||| || | || | | |||||||||| ||| | |||| || | | Sbjct 44509139 GATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCC-TGAATCTTTGCTTTTACAT 44509197 Query 43112 CGCCAC-CGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | || ||| || |||| || || || | ||||||||||| || || | |||| Sbjct 44509198 TGTCAATCGTATCCGAGCTC---TCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCT 44509254 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 44509255 TGACAAATATCTGCAT 44509270 >seq12 Length=146008498 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| |||| || || |||| || ||||| || || ||||| Sbjct 24218950 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCTTCGAGCTGTTTGCCGGCGAAG 24218891 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||| | ||| |||| | || | | Sbjct 24218890 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTTACATT 24218832 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || |||| |||||||| ||||| |||| || || Sbjct 24218831 ATCGATGGTGTCAGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTT 24218775 Query 43169 TACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 24218774 GACGAAGATCTGCAT 24218760 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| |||| || || | || || ||||| || || ||||| Sbjct 24218722 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCGGCGAAG 24218663 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||| |||||| || | | Sbjct 24218662 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTCACATTA 24218603 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| || || |||| |||||||| ||||| |||| || || Sbjct 24218602 TCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTG 24218546 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 24218545 ACGAAGATCTGCAT 24218532 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || ||||| ||||| |||| || || | || || ||||| || || ||||| Sbjct 24219178 TCCTTCTGGATATTATAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAAG 24219119 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||| |||||| |||| | Sbjct 24219118 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTG 24219059 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| || || |||| |||||||| || || |||| || || Sbjct 24219058 TCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTACCGGTTAAGGTTTTG 24219002 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 24219001 ACGAAGATCTGCAT 24218988 >seq1 Length=147124936 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 60057 AAAAATTTT-CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||||| | || | || ||| ||||||||| |||| |||||||||||||||| ||| Sbjct 99215337 AAAAATTTAACGCCGCTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATA 99215278 Query 60116 CTCACCACTATACTAC 60131 |||||||||||||||| Sbjct 99215277 CTCACCACTATACTAC 99215262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571278526105320