Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq9 168 6e-37 seq1 149 6e-31 seq11 118 9e-22 seq10 116 3e-21 seq12 111 1e-19 seq6 96.9 3e-15 seq7 86.0 6e-12 seq13 82.4 7e-11 >seq9 Length=96604005 Score = 168 bits (186), Expect = 6e-37 Identities = 406/603 (67%), Gaps = 25/603 (4%) Strand=Plus/Plus Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605 ||||| ||||| |||| ||||| | ||| | |||||||| || || ||||| |||||| Sbjct 49335816 ATGTTCCCGATCCAATACCCAGAAGTATGGGAAATGTACAAGAAAGCCGAAGCGTCGTTT 49335875 Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAA 57665 ||||||| || ||||| || |||||| | ||| | | ||||| | |||| | Sbjct 49335876 TGGACCGCAGAGGAAGTCGATCTGTCTTCCGTTCTTCGTCACTGGGAAGCTCTCACCG-- 49335933 Query 57666 TCTGA-GAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATT 57722 |||| ||| | | || |||| ||||| | || ||||| ||||| |||||||| || Sbjct 49335934 -CTGACGAGCACCACTTCATTAGTCACGTTCTCGCCTTTTTTGCCGCCTCCGATGGCATA 49335992 Query 57723 GTTAACGAGAA--TT--TGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAG 57778 || ||||| || || ||| | | | | |||| || ||| | | |||||| | Sbjct 49335993 GTCCTTGAGAACCTTGCTGTTCG---GTTCATGA-AAGAGGTCCAAATCTCCGAGGCGCG 49336048 Query 57779 ATGC-TTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTAC 57837 ||| ||||| || || ||| | || || ||||| | || || || ||||| || | Sbjct 49336049 -TGCTTTTTATGGTTTCCAAATCGCTATCGAAAATATCCACTCCGAGATGTACAGTCTCC 49336107 Query 57838 TCATCGATACGTACGTGAAGGA---CAACGACGAGAAACGTAGACTGTTCAACGCGATCG 57894 | |||| || ||| | || || | |||| |||| ||| || ||| ||| |||| Sbjct 49336108 TTCTCGAGACTTACATAAAAGATTCCGACGAAAAGAACCGT---CTTTTCCGCGCCATCG 49336164 Query 57895 AAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCA 57954 | || |||| | || || || || |||||| | || |||||||| | || | Sbjct 49336165 AGACGGTGCCGTGTGTGGCTAAAAAAGCCGAGTGGGCTATGAAATGGATCGA---CGGCG 49336221 Query 57955 CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGG 58014 | || |||||||| || ||||||| || || ||| || || || || || || | Sbjct 49336222 GAGAAACTTTCGCCGAACGGTTAATCGCTTTTGCTTGCGTAGAGGGGATCTTTTTCTCCG 49336281 Query 58015 GCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTA 58074 | || || || ||||||||| | || || | || | |||||||| | || || Sbjct 49336282 GAAGTTTCTGTGCCATATTTTGGTTAAAAAAGAGGGGGTTAATGCCCGGATTAACTTTCT 49336341 Query 58075 GCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACT 58134 |||||||| || || || || || |||||||| |||||| || ||| | |||||| Sbjct 49336342 CAAACGAGTTAATCTCACGAGATGAAGGTCTCCACTGTGATTTCGCTTGCTTGCTGTACT 49336401 Query 58135 CTC 58137 ||| Sbjct 49336402 CTC 49336404 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || || ||||| || ||| | || || || | Sbjct 73174369 AAGATGCAGATCTTCGTCAAAACCCTAACGGGGAAAACCATAACCCTTGAGGTCGAGTCT 73174428 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | |||||| | || |||||||||||| | || ||||| Sbjct 73174429 TCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGAT 73174488 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || || || || ||||| || || ||| | |||||| || | ||| || Sbjct 73174489 CAACAACGCCTTATCTTCGCCGGGAAGCAGCTTGAAGACGGCCGCACCTTAGCCGACTAC 73174548 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || || ||||| |||||||| || || || | || | |||||| Sbjct 73174549 AATATCCAGAAGGAATCCACTCTTCACCTCGTCCTCCGCCTCCGCGGCGGT 73174599 >seq1 Length=147124936 Score = 149 bits (164), Expect = 6e-31 Identities = 313/457 (68%), Gaps = 11/457 (2%) Strand=Plus/Minus Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 || || ||||||||||||||||| || || ||| ||| | | || | || || Sbjct 98687699 GCCTTCTTCGCCGCATCCGATGGCATCGTCCTCGAAAATCTCGCCGTTCGCTTCATGAAA 98687640 Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGC-TTTTACGGATTTCAAGTGGCCATTGAAAACGT 57814 || || ||| | | |||||| | ||| ||||| ||||| ||| | ||||| || || | Sbjct 98687639 GAGGTCCAAATCGCAGAGGCGCG-TGCGTTTTATGGATTCCAAATCGCCATCGAGAATAT 98687581 Query 57815 GCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACG 57874 || || || |||||| || ||| |||| || || | || || | ||| ||| Sbjct 98687580 CCACTCTGAGATGTATAGTCTCCTCCTCGAAACTTATATCAAAGATGCCACCGAAAAAAA 98687521 Query 57875 TAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAA 57933 | || ||| |||| | ||||| |||| ||| | || || || || || ||| | Sbjct 98687520 CCGCCTCTTCCACGCTACTGAAACGGTGCCGTGCG-TGGCTAAAAAAGCCGATTGGGCTT 98687462 Query 57934 TCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCG 57993 |||||||||| | ||| | || || ||||| || ||||||| ||||| || Sbjct 98687461 TCAAATGGATCGACGGCGGCGAAGCT---TTTGCCGAACGGTTAATCGCTTTCGCTTGCG 98687405 Query 57994 TCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGC 58052 | ||||| ||||| || || ||||| || |||| | ||||||||| | || || ||||| Sbjct 98687404 TAGAAGGCATATTTTTCTCCGGCAGTTTCTGCG-CGATATTTTGGTTAAAAAAGCGCGGG 98687346 Query 58053 CTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACT 58112 | ||||| || | || || ||||||||||| || || || || ||||||||| Sbjct 98687345 TTAATGCCTGGATTAACTTTCTCAAACGAGTTGATCTCTCGAGATGAAGGTCTCCATTGC 98687286 Query 58113 GATTTTGCGTGCCTAATGTACTCTCACATT--GTCAA 58147 || ||||| ||| | ||||||||| | || ||||| Sbjct 98687285 GACTTTGCTTGCTTGCTGTACTCTCTCCTTCAGTCAA 98687249 >seq11 Length=105699404 Score = 118 bits (130), Expect = 9e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| ||||||||||||| |||||| | || |||||| ||| Sbjct 76982804 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACAATCACCTTGGAGGTTGAAAGCTCC 76982863 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || || ||| | ||| |||||||| | || || || || Sbjct 76982864 GATACCATTGACAATGTTAAGGCAAAGATTCA-GGATAAGGAAGGAATCCCACCTGATCA 76982922 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || || || |||||||| |||||||| | |||| || |||||||| Sbjct 76982923 GCAAAGGCTCATCTTTGCCGGCAAACAATTGGAAGATGGGAGGACTTTGGCTGATTATAA 76982982 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||| ||||| || || ||||| || || ||| Sbjct 76982983 CATTCAGAAAGAGTCTACCCTTCACCTTGTTCTT 76983016 Score = 113 bits (124), Expect = 4e-20 Identities = 156/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || || || || || ||||| || || || |||| || ||| Sbjct 76982345 AAGATGCAGATCTTTGTGAAAACCCTTACCGGCAAGACCATAACACTCGAGGTCGAAAGC 76982404 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||||| | || |||||| Sbjct 76982405 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCCGAC 76982464 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||||||||||||| | |||||| | ||| | |||||| Sbjct 76982465 CAGCAGCGTCTCATTTTCGCTGGCAAACAGCTCGAAGACGGTCGGACCCTTGCTGATTAT 76982524 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 ||||| || |||||||| || || || || || |||| Sbjct 76982525 AACATCCAGAAAGAATCCACCCTCCACCTCGT-CTTA 76982560 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || || || | || ||||| || |||||| |||| || || || Sbjct 76982575 CATGCAAATCTTTGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGTTC 76982634 Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| |||| | | | ||| | | |||||||||| | || || |||| Sbjct 76982635 CGACACCATCGACAACGTTAAGGCCAAGATTCAAG-ACAAGGAAGGAATCCCACCTGACC 76982693 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | |||||| | || |||||||||||||| |||||||| | ||| || ||||||| Sbjct 76982694 AACAGCGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGGAGGACCTTGGCTGATTATA 76982753 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 | || ||||| ||||| || ||||| || || Sbjct 76982754 ATATCCAAAAGGAATCCACCCTTCACCTTGT 76982784 >seq10 Length=114683840 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || |||||||| |||| || || || Sbjct 64671226 ATGCAAATCTTCGTTAAGACGCTTACCGGAAAGACGATCACTCTCGAGGTCGAGAGCTCT 64671167 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | ||| |||||||||||| | ||||| |||||| Sbjct 64671166 GACACGATCGACAACGTGAAAGCCAAAATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 64671107 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || || || | || ||| |||| | |||||| || Sbjct 64671106 CAACGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGGCGGACTTTAGCCGATTACAAT 64671047 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || |||||||||||||||||||| || Sbjct 64671046 ATCCAGAAGGAATCGACTCTTCATCTGGTCCT 64671015 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| |||||||| || ||||| |||||||| |||| || || Sbjct 64671686 AAAGATGCAGATCTTCGTTAAGACTCTAACCGGCAAGACGATCACTCTCGAGGTCGAGAG 64671627 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | || || | ||| || ||||||||| | || || || Sbjct 64671626 CTCCGACACGATCGACAACGTGAAGGCCAAAATCCAAGATAAGGAAGGCATCCCTCCAGA 64671567 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| || |||||| | || ||| ||| || |||||| Sbjct 64671566 CCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTTGAGGACGGCCGGACCTTGGCCGATTA 64671507 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || || ||||| || || || || Sbjct 64671506 CAACATCCAAAAGGAGTCAACTCTCCACCTCGTCCT 64671471 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || |||||||| || || || || || || | || ||||| || Sbjct 38466679 CATGCAAATTTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAAGTTGAGAGTTC 38466738 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || ||| | || |||||||||||| | || || || || Sbjct 38466739 TGACACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCA 38466798 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||||||| | ||||| || ||| | |||||||| Sbjct 38466799 GCAGAGGTTGATTTTTGCTGGCAAACAGCTCGAAGATGGTAGGACACTTGCAGATTATAA 38466858 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || || ||||| |||| || ||||| | || || Sbjct 38466859 TATCCAGAAAGAGTCTACCCTTCACTTGGTGCTCCGACTGCGTGGTGG 38466906 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || |||||||| || || || || || || | || ||||| || Sbjct 38472391 CATGCAAATTTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAAGTTGAGAGTTC 38472450 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || ||| | || |||||||||||| | || || || || Sbjct 38472451 TGACACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCA 38472510 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||||||| | ||||| || ||| | |||||||| Sbjct 38472511 GCAGAGGTTGATTTTTGCTGGCAAACAGCTCGAAGATGGTAGGACACTTGCAGATTATAA 38472570 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || || ||||| |||| || ||||| | || || Sbjct 38472571 TATCCAGAAAGAGTCTACCCTTCACTTGGTGCTCCGACTGCGTGGTGG 38472618 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || ||||| |||||| | || || || || Sbjct 38472848 ATGCAGATATTCGTGAAGACCTTGACCGGTAAAACCATCACCCTGGAGGTCGAGAGCTCG 38472907 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| || ||| ||||||||| || | || || |||||| Sbjct 38472908 GACACCATTGACAATGTGAAAGCGAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCAG 38472967 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || ||| | || || | ||| | ||||||||| Sbjct 38472968 CAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGAGGACCCTTGCGGATTATAAC 38473027 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || ||||| |||||||| || ||| |||| Sbjct 38473028 ATCCAAAAGGAATCGACCCTGCATTTGGT 38473056 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || || |||| ||||| || ||||| |||| || || ||| Sbjct 64671454 ATGCAAATCTTCGTGAAAACCTTGACCGGCAAGACAATCACTCTCGAGGTCGAGAGCTCC 64671395 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || |||||||||||| | || || |||||| Sbjct 64671394 GACACGATCGACAACGTTAAGGCGAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 64671335 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || ||||| | |||||| || || ||| || ||| Sbjct 64671334 CAACGTCTCATCTTCGCCGGAAAACAACTCGAAGACGGCCGTACCTTGGCCGACTACAAC 64671275 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || || || || ||| | || | ||||| Sbjct 64671274 ATCCAGAAGGAGTCAACGCTCCACCTTGTCCTTCGTTTGCGTGGCGG 64671228 >seq12 Length=146008498 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || ||||| || |||||| |||| ||||| Sbjct 24218300 AAAGATGCAGATCTTCGTCAAAACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGAG 24218359 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | || || | ||| |||||||||||| | || || || Sbjct 24218360 TTCTGACACCATCGATAATGTAAAGTCTAAAATTCAAGACAAGGAAGGCATCCCACCAGA 24218419 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| ||||||||| | || ||| || || |||||| Sbjct 24218420 CCAGCAGCGTCTCATCTTCGCCGGCAAACAGCTCGAGGACGGCCGTACCTTGGCCGATTA 24218479 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| || ||||| || || || || || || Sbjct 24218480 CAACATTCAGAAGGAATCCACCCTCCACCTTGTCCT 24218515 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || Sbjct 12767144 AAGATGCAGATCTTCGTTAAGACCCTGACCGGCAAGACCATCACCCTCGAAGTCGAGAGT 12767085 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | || || || ||| ||||||||||| | || || ||| Sbjct 12767084 TCCGACACGATCGACAACGTTAAGGCGAAAATCCAAGACAAGGAAGGGATCCCACCAGAC 12767025 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || ||||| || ||||| || |||||| | ||||| ||| || |||||| Sbjct 12767024 CAACAACGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGGACCTTGGCCGATTAC 12766965 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || ||||| || || Sbjct 12766964 AACATCCAGAAGGAGTCCACCCTACATCTCGTCCT 12766930 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || | || ||||| || |||||| |||| || || || Sbjct 24218760 ATGCAGATCTTCGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCT 24218819 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| |||||||||||| | || || |||||| Sbjct 24218820 GACACCATCGATAATGTAAAGTCTAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAG 24218879 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||||||| | |||||| || || |||||| ||| Sbjct 24218880 CAGCGTCTCATCTTCGCCGGCAAACAGCTCGAAGACGGCCGTACCTTGGCCGATTACAAC 24218939 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || || || || || || Sbjct 24218940 ATCCAGAAGGAATCCACCCTCCACCTTGTCCT 24218971 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || | || || || || |||||| |||| || || ||| Sbjct 24218988 ATGCAGATCTTCGTCAAAACCTTAACCGGTAAGACCATCACCCTCGAAGTCGAGAGCTCC 24219047 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | ||| |||||||||||| | || || |||||| Sbjct 24219048 GACACCATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGCATCCCACCAGACCAG 24219107 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||||||| | ||||| || || ||||||||| Sbjct 24219108 CAGCGTCTCATCTTCGCCGGCAAACAGCTCGAAGATGGCCGTACCTTGGCCGATTATAAT 24219167 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || || || || || || Sbjct 24219168 ATCCAGAAGGAATCCACCCTCCACCTCGTCCT 24219199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || | || ||||| || |||||| |||| || || ||| Sbjct 24218532 ATGCAGATCTTCGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCC 24218591 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| |||||||||||| | || || |||||| Sbjct 24218592 GACACCATCGATAATGTGAAGTCTAAAATCCAAGACAAGGAAGGCATCCCACCAGACCAG 24218651 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || |||||| | ||||| || || |||||| ||| Sbjct 24218652 CAGCGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGTACCTTGGCCGATTACAAC 24218711 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || || || || || || Sbjct 24218712 ATCCAGAAGGAATCCACCCTCCACCTTGTCCT 24218743 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| |||| || ||||| ||||| | || || ||| || Sbjct 24219443 CATGCAGATTTTCGTTAAGACATTGACTGGGAAAACAATCACATTGGAGGTGGAAAGTTC 24219502 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || || || |||||||||||| | || || || || Sbjct 24219503 GGATACAATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAAGGTATCCCTCCAGATCA 24219562 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 ||| | || || || ||||| || || ||||| || | |||| | ||| ||||||| Sbjct 24219563 GCAAAGGCTCATCTTTGCTGGAAAGCAATTGGAGGATGGGAGGACT-TTAGCTGATTATA 24219621 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||||| ||||| || || ||||| || || ||| Sbjct 24219622 ACATTCAGAAAGAGTCCACCCTTCACCTTGTTCTT 24219656 >seq6 Length=121339338 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| |||||||| ||||| || || || || || || || || ||| | || ||||| Sbjct 51785894 CAAAGATGCAAATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAGT 51785835 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | |||||| | || |||||||||||| | || |||| Sbjct 51785834 CTTCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCACCCG 51785775 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||| ||||| || || || || || || ||| | || ||| || | ||| | Sbjct 51785774 ACCAACAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCTTAGCCGACT 51785715 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 | ||||| || || ||||| || || ||||| || || | || ||||| ||| Sbjct 51785714 ACAACATCCAGAAGGAATCCACCCTCCATCTCGTGCTCCGTCTTAGGGGAGGT 51785662 >seq7 Length=127721098 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || || || || ||||| | || |||||| || Sbjct 86220616 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACTATCACTCTAGAGGTTGAAAGTTCA 86220675 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || ||| | | |||||||||| | || || ||||| Sbjct 86220676 GACACCATTGACAATGTTAAGGCAAAGATTCAAG-ACAAGGAAGGGATCCCACCAGACCA 86220734 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || ||||| |||||||| || | ||||| | ||| || |||||||| Sbjct 86220735 GCAAAGGCTCATATTTGCTGGCAAGCAACTTGAAGATGGCAGGACATTGGCTGATTATAA 86220794 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||| || || ||||| ||||| || ||| Sbjct 86220795 TATCCAAAAGGAGTCTACTCTGCATCTTGTCCTT 86220828 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || ||||| || |||||| | || |||||| || Sbjct 44510411 CATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACAATCACCCTTGAGGTTGAAAGCTC 44510352 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||| |||||||| | || || ||||| Sbjct 44510351 CGACACAATTGATAATGTCAAGGCTAAGATCCAGGATAAGGAAGGGATCCCTCCTGACCA 44510292 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || || || || || || ||||||| | || | || || || Sbjct 44510291 ACAGAGGCTTATCTTTGCCGGTAAGCAACTGGAAGATGGTCGCACCCTTGCTGACTACAA 44510232 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||||||| || || || || || || ||| | || ||||| || Sbjct 44510231 CATTCAAAAAGAGTCTACCCTCCACCTTGTGCTTCGTCTCAGGGGTGG 44510184 >seq13 Length=144148110 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| ||||| || || || |||||| | || ||||| || Sbjct 116705937 ATGCAAATTTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAAGTTGAGAGCTCA 116705996 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||| |||||||| | || || |||||| Sbjct 116705997 GACACGATTGATAATGTTAAGGCCAAGATCCAGGATAAGGAAGGAATCCCACCAGACCAG 116706056 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| || || | ||||| | ||| | ||||| ||| Sbjct 116706057 CAGAGGCTGATTTTTGCTGGGAAGCAACTTGAAGATGGGAGGACCCTTGCAGATTACAAC 116706116 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || ||||| ||| | || ||||| ||| Sbjct 116706117 ATCCAGAAGGAATCCACTTTGCACCTGGTCCTT 116706149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445346159298480