Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq10 123 2e-23 seq12 116 3e-21 seq7 109 4e-19 seq11 96.9 3e-15 seq6 84.2 2e-11 seq1 84.2 2e-11 seq3 82.4 6e-11 >seq10 Length=114683840 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| |||||||||||||| | ||| | | ||||| | |||| Sbjct 38459742 TGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCCTCGAGTTGT 38459683 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| ||||||||| ||||||||| ||| | ||| |||||||| |||| Sbjct 38459682 TTTCCGGCAAAAATAAGCCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGGATTTTG 38459623 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||| ||| | ||| || | |||||||||||| || || Sbjct 38459622 GCCTTGACATTATCAATAGTATCGGAGCTTTCCACCTCAAGGGTGATGGTTTTACCAGTA 38459563 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| |||||||| Sbjct 38459562 AGGGTTTTCACAAAGATCTGCAT 38459540 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||||||||| || | || |||| |||||| || || |||||||| ||||| || || || Sbjct 38473075 CCCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGC 38473016 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||| | || || || ||| |||| | || ||| ||||| ||| Sbjct 38473015 AAGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGG 38472956 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG 16886 | ||||| ||||| ||||| | ||||| | | | | ||||| || |||| || Sbjct 38472955 AATCCCCTCCTTGTCCTGAATTTTCGCTTTCACATTGTCAATGGTGTC--CGAGCTCTCG 38472898 Query 16887 TT-TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||| ||||||| || || || || |||||||| Sbjct 38472897 ACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 38472848 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||||||||| || | ||| |||| ||||| || ||||||||||| ||||| || || || Sbjct 38460451 CCCTCCTCGAAGGCGCAGAACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGC 38460392 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | ||||| | ||| || || ||| |||| | || ||| ||||| || Sbjct 38460391 AAGAGTCCTCCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 38460332 Query 16828 CACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| | | ||| | |||||| | | | ||||| | |||| Sbjct 38460331 GATACCCTCCTTGTCTTGGATCTTGGT-CTTCACGTTATCAATTGTGTCTGAGCTCTCCA 38460273 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || || |||||||| |||| ||||| ||||||||||||||| Sbjct 38460272 CCTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 38460223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||||||||| || | || |||| |||||| || || |||||||| ||||| || || || Sbjct 38467135 CCCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGC 38467076 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||| | || || || ||| |||| | || ||| ||||| || Sbjct 38467075 AAGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 38467016 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| || || || || || |||||| | | | ||||| | |||| Sbjct 38467015 GATACCCTCCTTATCTTGGATCTTGGC--CTTCACATTATCAATTGTGTCTGAGCTCTCC 38466958 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||| |||||||| |||| ||||| ||||||||||||||| Sbjct 38466957 ACCTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 38466907 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||||||||| || | || |||| |||||| || || |||||||| ||||| || || || Sbjct 38472847 CCCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGC 38472788 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||| | || || || ||| |||| | || ||| ||||| || Sbjct 38472787 AAGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 38472728 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| || || || || || |||||| | | | ||||| | |||| Sbjct 38472727 GATACCCTCCTTATCTTGGATCTTGGC--CTTCACATTATCAATTGTGTCTGAGCTCTCC 38472670 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||| |||||||| |||| ||||| ||||||||||||||| Sbjct 38472669 ACCTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 38472619 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||| ||||| || || |||||||| || | ||| | ||| Sbjct 38460891 AGGACAAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCTGCTAAAGTTCGACCATCC 38460832 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| | || | || ||| |||||| ||| | ||||| ||||| Sbjct 38460831 TCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCC 38460772 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | ||||| | | | | ||||| | |||| |||| |||||||||| Sbjct 38460771 TGAATCTTAGATTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTT 38460712 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || |||| || || || || ||||||||| Sbjct 38460711 TTCCCAGTCAAGGTCTTCACGAATATCTGCATT 38460679 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||||||||| || || |||||||| || | ||| | ||| Sbjct 38467347 AGGACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCC 38467288 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| | || | || ||| ||||| || | ||||| ||||| Sbjct 38467287 TCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 38467228 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGAT 16899 || || ||| ||||| | | | | |||| ||| |||| || |||| |||||| Sbjct 38467227 TGAATCTTGGCT--TTCACATTGTCAATGGTGT--CCGAGCTCTCGACCTCCAGGGTGAT 38467172 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||| ||||||| || || || || |||||||| Sbjct 38467171 GGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 38467136 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||||||||| || || |||||||| || | ||| | ||| Sbjct 38473287 AGGACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCC 38473228 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || || || || || ||| | || | || ||| ||||| || | ||||| ||||| Sbjct 38473227 TCTAACTGCTTACCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 38473168 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| | ||||| | | | | ||||| | |||| |||| |||||| ||| Sbjct 38473167 TGAATTTTCGCTTTCACATTGTCGATCGTGTCTGAGCTCTCCACCTCCAGGGTGATTGTT 38473108 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||||| || || || || |||||||| Sbjct 38473107 TTCCCGGTCAAGGTCTTCACGAATATCTGCAT 38473076 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| || ||||||||||| | ||| | | ||||| | |||| Sbjct 38471682 TGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGCAAGAGTTCGGCCATCCTCAAGTTGT 38471623 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | ||||||| |||||||| ||| | || |||||||| |||| Sbjct 38471622 TTTCCGGCAAAGATAAGCCTTTGTTGGTCAGGAGGAATCCCTTCTTTGTCTTGGATTTTA 38471563 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||| || || || | ||||||||| || || || Sbjct 38471562 GCCTTGACATTATCGATAGTATCAGAACTTTCTACCTCAAGGGTGATGGTCTTACCAGTA 38471503 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| |||||||| Sbjct 38471502 AGGGTTTTCACAAAGATCTGCAT 38471480 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| |||||||| ||||||| ||| | ||||||| | ||| Sbjct 64671480 TGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCCTCAAGCTGT 64671539 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| ||| | ||| || || || |||| Sbjct 64671540 TTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTG 64671599 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | |||||| | ||| || | ||||| || || ||||| Sbjct 64671600 GCCTTCACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATCGTCTTGCCGGTT 64671659 Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938 || || || || || |||||||| || Sbjct 64671660 AGAGTCTTAACGAAGATCTGCATCTT 64671685 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| || ||||||||||| | ||| | | ||||| | |||| Sbjct 38466198 TGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGCAAGAGTTCGGCCATCCTCGAGTTGT 38466139 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | ||||||| |||||||| ||| | || |||||||| |||| Sbjct 38466138 TTTCCGGCAAAGATAAGCCTTTGTTGGTCAGGAGGGATCCCTTCTTTGTCTTGGATTTTA 38466079 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||| || || || | ||||||||| || || || Sbjct 38466078 GCCTTGACATTATCGATAGTATCAGAACTTTCTACCTCAAGGGTGATGGTCTTACCAGTA 38466019 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| |||||||| Sbjct 38466018 AGGGTCTTCACAAAGATCTGCAT 38465996 >seq12 Length=146008498 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || ||||||| ||||| ||| || ||||||||||| || |||||||| ||||| Sbjct 12766686 CCCACCACGAAGCCTCAATACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 12766745 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| ||||||| | |||||| || ||| | || |||| || ||||| || Sbjct 12766746 CAAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAATATGAGCCTTTGCTGGTCTGGTGG 12766805 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || ||||| ||| || | | | | ||||| | || Sbjct 12766806 GATGCCTTCCTTGTCTTGGATCTTTGC--CTTGACGTTGTCAATGGTGTCAGAGCTTTCG 12766863 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || ||||| || |||||||| |||||||| || |||||||| Sbjct 12766864 ACTTCCAAAGTTATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 12766913 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || || | ||| || ||||||||||| || |||||||| |||||| Sbjct 12766915 CCACCACGTAGACGGAGGACGAGATGTAGGGTGGACTCCTTCTGGATGTTGTAATCGGCC 12766974 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | ||||| || || | || || || |||||||| || Sbjct 12766975 AAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGG 12767034 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| |||| | ||| || | | | | |||||| ||| | Sbjct 12767035 ATCCCTTCCTTGTCTTGGATTTTCGCCTTAACGTTGTCGATCGTGTCGGAACTCTCGACT 12767094 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||||||||| || |||||||| || || || || |||||||| || Sbjct 12767095 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCATCTT 12767144 >seq7 Length=127721098 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||||| || | || |||| |||||| || ||||||||||| ||||| ||||| || Sbjct 44509271 CCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGC 44509330 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | ||||||| | || || || ||| |||| | || ||||||||| || Sbjct 44509331 AAGGGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGG 44509390 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| || || || || || ||| || | | || |||||| | |||| Sbjct 44509391 GATACCCTCCTTATCTTGGATCTTGGC--CTTAACATTATCAACCGTGTCGGAGCTCTCC 44509448 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || |||||||| ||||||| ||||| ||||| ||||||||| Sbjct 44509449 ACCTCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCATT 44509499 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||| || || ||||||||||| || | ||| | | |||||||||||| Sbjct 44509980 TGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAATTGT 44510039 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || ||| | ||||||| ||||||||| ||| | || |||||||| || || Sbjct 44510040 TTTCCAGCAAAGATAAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGGATCTTG 44510099 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | |||||| | ||| ||| | |||||| || || || | Sbjct 44510100 GC--CTTGACATTATCAATTGTGTCGGAGCTTTCCACTTCAAGGGTGATTGTCTTGCCAG 44510157 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||||||| || ||||| Sbjct 44510158 TAAGAGTTTTGACAAATATTTGCAT 44510182 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| || |||||||| || || |||||||| || | |||| ||||| Sbjct 44509059 AGGACAAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCTAGGGTTCGACCGTCC 44509118 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| | || | || ||| || ||| || | ||||| ||||| Sbjct 44509119 TCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCC 44509178 Query 16844 GCAAT--TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 ||| ||||| || || | | | | || || | ||| |||| |||||||| Sbjct 44509179 TGAATCTTTGCT--TTTACATTGTCAATCGTATCCGAGCTCTCAACCTCCAGGGTGATGG 44509236 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||| || |||||||| |||||||| Sbjct 44509237 TTTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 44509270 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || |||||||||||||| ||||||||||| || | ||| | | ||| Sbjct 44510427 AGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGGCCATCC 44510486 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || || | ||||||| ||||||||| || | || || ||||| Sbjct 44510487 TCTAGCTGTTTCCCAGCGAAGATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCT 44510546 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | |||||| | ||| || | |||||||| Sbjct 44510547 TGGATCTTGGC--CTTGACATTATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGG 44510604 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || ||||| ||||| |||||||| Sbjct 44510605 TCTTACCAGTAAGAGTTTTTACAAAGATCTGCAT 44510638 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || |||| || |||| || || || ||||||||||| || ||||||||||| Sbjct 86220615 CCCACCACGCAGCCGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGC 86220556 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | | || || | || ||||| ||| | || |||| || ||||| || Sbjct 86220555 CAATGTCCTACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGG 86220496 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| ||||| || ||||| |||||| | | | | || ||| || Sbjct 86220495 GATACCCTCCTTGTCTTGGATCTTTGC--CTTCACATTGTCAATGGTATCGGAACTTTCA 86220438 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| |||||||| || || || ||||| |||||||| Sbjct 86220437 ACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 86220388 >seq11 Length=105699404 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| || ||||||| || | || || ||||| |||||||| || || || || || Sbjct 76982803 CCCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGC 76982744 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | || |||||||||||||| || | || | ||||||||||| || Sbjct 76982743 CAAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGG 76982684 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || ||||| ||| | ||| || | | | | |||||| ||| Sbjct 76982683 GATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGAC 76982624 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||| || ||||| | ||||||||||| || ||||| Sbjct 76982623 TTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 76982576 >seq6 Length=121339338 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| ||||| || |||||||||||||| | ||| | ||||| Sbjct 51785678 AGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCC 51785737 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || ||| | || || ||||||||||| || | ||| || ||||| Sbjct 51785738 TCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCT 51785797 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | | |||||| | ||| || | ||| |||| Sbjct 51785798 TGGATCTTGGCT--TTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGG 51785855 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || |||||||| || || ||||| || Sbjct 51785856 TCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 51785892 >seq1 Length=147124936 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/209 (69%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| ||||| || |||||||||||||| | ||| | |||| || | || Sbjct 22444445 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGC 22444504 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | ||||| ||||||||||| || | |||||| ||||| || || Sbjct 22444505 TTCCCGGCGAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTG 22444564 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | || ||| || || || | ||| ||||| || || | Sbjct 22444565 GC--CTTGACGTTGTCGATTGTATCGGAGGATTCAACCTCTAAGGTTATGGTCTTCCCCG 22444622 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || |||||||| || |||||||| ||| Sbjct 22444623 TTAGGGTTTTGACGAAGATCTGCATCTTG 22444651 >seq3 Length=102937913 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| |||||||| |||||||||||||| | ||| | | || || | ||| Sbjct 37625844 TGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGCTAGGGTGCGGCCATCTTCGAGTTGC 37625903 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || || ||||||||| || | ||| |||||||| || || Sbjct 37625904 TTACCGGCGAAGATGAGGCGTTGTTGGTCCGGGGGGATGCCTTCTTTGTCTTGGATCTTG 37625963 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | |||||| | ||| || | ||| ||||| || || | Sbjct 37625964 GCT--TTGACATTGTCGATGGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCCG 37626021 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 | || ||||| || || ||||||||| Sbjct 37626022 TTAGGGTTTTCACGAAGATCTGCATT 37626047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404715655642810