Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq10 118 1e-21 seq11 107 2e-18 seq6 105 7e-18 seq7 102 9e-17 seq12 95.1 1e-14 >seq10 Length=114683840 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || |||| | ||||| |||| ||| | || ||||| || ||||||||||| || Sbjct 64671000 CCACCTCGAAGACGCAGGACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 64671059 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | ||||||| |||| || || ||||| || ||||| ||||| || |||||||| | || Sbjct 64671060 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 64671119 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | || |||||||| |||||| ||| | ||| | | | |||||| |||| || Sbjct 64671120 ATGCCTTCCTTGTCTTGGATTTTGGCTTTCA-CGTTGTCGATCGTGTCAGAGCTC---TC 64671175 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| ||||| || || || || |||||||| || ||||||||||| Sbjct 64671176 GACCTCGAGAGTGATCGTCTTTCCGGTAAGCGTCTTAACGAAGATTTGCAT 64671226 Score = 113 bits (124), Expect = 5e-20 Identities = 152/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 ||||| |||| |||||| || |||||||| ||||| ||||| || | || |||| ||| Sbjct 38473279 ATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCCTCTAACTG 38473220 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||||||||| ||||| | | ||||||||| | ||| | | |||||||||| ||| ||| Sbjct 38473219 CTTACCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC-TGAATTT 38473161 Query 42125 TTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 | | ||| | | | | |||||| |||| ||||| || | ||||| ||||| | Sbjct 38473160 TCGCTTTCACATTGTCGATCGTGTCTGAGCTC---TCCACCTCCAGGGTGATTGTTTTCC 38473104 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| || || || ||||| Sbjct 38473103 CGGTCAAGGTCTTCACGAATATCTGCAT 38473076 Score = 105 bits (116), Expect = 7e-18 Identities = 145/199 (73%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || |||||||| |||| ||||| |||| || ||||| || || ||||| Sbjct 64671491 CTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCCTCAAGCTGTTTTCCGGCGAA 64671550 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || ||||| || |||||| || | ||| Sbjct 64671551 GATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCA-CGT 64671609 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || |||| ||||| || ||||| ||||| |||| Sbjct 64671610 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTCT 64671666 Query 42193 TTACAAAGATTTGCATTTT 42211 | || ||||| ||||| || Sbjct 64671667 TAACGAAGATCTGCATCTT 64671685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 ||||| |||| |||||| || |||||||| ||||| ||||| || | || || | ||| Sbjct 38467339 ATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCCTCCAACTG 38467280 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| ||||| ||||| | | ||||||||| | ||| | | |||||||||| ||| | | Sbjct 38467279 CTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC-TGAATCT 38467221 Query 42125 TTGTTTGAGCGTCGCCACCG-TGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 | | || | | | || | |||| |||| || || || | ||||||||||| | Sbjct 38467220 TGGCTTTCACATTGTCAATGGTGTCCGAGCTC---TCGACCTCCAGGGTGATGGTTTTAC 38467164 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| || || || ||||| Sbjct 38467163 CGGTCAAGGTCTTCACGAATATCTGCAT 38467136 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | ||||| |||||||||| || |||||||| || || ||||| || Sbjct 38473074 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38473015 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | | || || |||||||| ||||| || || | | ||||||||| | || Sbjct 38473014 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 38472955 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTC---GCTCGATTC 42157 | | |||||||||| ||| |||| | || | | | || | |||| |||| || Sbjct 38472954 ATCCCCTCCTTGTCC-TGAATTTTCGCTTTCACATTGTCAATGGTGTCCGAGCTC---TC 38472899 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||||||||| || || | ||||| || || || ||||| Sbjct 38472898 GACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 38472848 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/209 (70%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 ||||| ||| ||||| ||||||||||| || || | ||| || | || || | ||| Sbjct 38460883 ATGCAGAGTGGATTCCTTCTGAATATTGTAGTCTGCTAAAGTTCGACCATCCTCCAACTG 38460824 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| ||||| || || | | ||||||||| | || | | |||||||||| ||| | | Sbjct 38460823 CTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCC-TGAATCT 38460765 Query 42125 TTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 | | ||| | | | | |||||| |||| ||||| || | ||||||||||| | Sbjct 38460764 TAGATTTCACATTGTCAATCGTGTCCGAGCTC---TCCACCTCCAGGGTGATGGTTTTCC 38460708 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || | ||||| || || || |||||| Sbjct 38460707 CAGTCAAGGTCTTCACGAATATCTGCATT 38460679 >seq11 Length=105699404 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || || || || |||||||| || ||||| |||| || ||||| || |||||||| Sbjct 76982538 TCTTTCTGGATGTTATAATCAGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAA 76982479 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||||| ||| | | |||||||| ||| || |||| ||| Sbjct 76982478 ATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 76982420 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || |||| || ||||| ||||| || || || || || Sbjct 76982419 GTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCAC 76982360 Query 42197 AAAGATTTGCATTTTC 42212 |||||| ||||| ||| Sbjct 76982359 AAAGATCTGCATCTTC 76982344 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| ||||| |||||||||| |||| | | || || | || || |||||||| Sbjct 76982766 TCCTTTTGGATATTATAATCAGCCAAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAG 76982707 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||| ||||| | ||| | | |||||||| ||| | || | | | ||| Sbjct 76982706 ATCAAACGCTGTTGGTCAGGTGGGATTCCTTCCTTGTCT-TGAATCTTGGCCTTAACGTT 76982648 Query 42138 GCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| ||| || || |||| |||||||| ||||| |||| || || Sbjct 76982647 GTCGATGGTGTCGGAACTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTT 76982591 Query 42194 TACAAAGATTTGCAT 42208 |||||||||||||| Sbjct 76982590 GACAAAGATTTGCAT 76982576 >seq6 Length=121339338 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | ||| | ||| | ||| ||||| || || ||||| || || Sbjct 51785662 ACCTCCCCTAAGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 51785721 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || || |||| || |||||||| || || || ||||| ||||| ||||||| ||| Sbjct 51785722 TAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGG 51785781 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || |||||||| ||| || ||||| | | | |||||| || || || Sbjct 51785782 GATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAAC 51785841 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || ||||| || |||||||| || || || ||||||||||| || Sbjct 51785842 CTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 51785892 >seq7 Length=127721098 Score = 102 bits (112), Expect = 9e-17 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||||| |||||||||| || |||||||||||| || || || || Sbjct 44509272 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCA 44509331 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | |||| || |||||||| || || || || | | ||| ||||| | ||| Sbjct 44509332 AGGGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGG 44509391 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | |||||| || ||| || || | | | |||||||| |||| ||| Sbjct 44509392 ATACCCTCCTTATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTC---TCC 44509448 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | ||| |||||||| || || | || || ||||| || |||||| Sbjct 44509449 ACCTCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCATT 44509499 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||||||||| || | || ||||||||| |||||||| || |||| |||| | Sbjct 86220602 CGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCCAATGTCCTACCA 86220543 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| ||||| || ||||| | |||||||| | || | | ||||||| Sbjct 86220542 TCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATACCCTCCTTG 86220483 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 || ||| ||| || | | | | || ||| ||| || || | |||||| Sbjct 86220482 TCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTGATG 86220423 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || |||||||||||||| ||||| Sbjct 86220422 GTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 86220388 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| ||||| || || || | || |||||||| || |||||||| Sbjct 44510447 CTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCTAGCTGTTTCCCAGCGAA 44510506 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||| ||||| | || | | |||||||| ||| || |||| | Sbjct 44510507 GATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 44510566 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| |||||| |||| |||||||| || || || || || ||||| Sbjct 44510567 ATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTTAC 44510626 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 44510627 AAAGATCTGCAT 44510638 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 41983 CTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCA 42042 |||||| ||||| | ||||| |||| ||| |||||| ||||| ||||| ||||| | Sbjct 44543514 CTCCTC--AAACGAAGGACCAAGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAA 44543571 Query 42043 GAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCA 42102 | || || | | ||||||||||||| ||| || || || | ||| || | | ||| | Sbjct 44543572 GTGTACGACCATATTCTAGCTGCTTACTAGCAAAGATAAGCCTCTGTTGATTTGGTGGGA 44543631 Query 42103 CGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACAT 42162 | || || || ||| ||| |||| | | | |||||| |||||| | Sbjct 44543632 TTCCTTCTTTATCTTGGATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCT 44543691 Query 42163 CGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | | ||||| || ||||| || || ||||| ||||| |||||||| Sbjct 44543692 CAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 44543737 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||| ||||| || || || |||| || | |||||| ||||| || Sbjct 44509079 CTCCTTCTGGATATTGTAGTCAGCTAGGGTTCGACCGTCCTCCAACTGCTTCCCAGCAAA 44509138 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | |||||| || | || | | |||||||||| ||| | |||| || | | Sbjct 44509139 GATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCC-TGAATCTTTGCTTTTACAT 44509197 Query 42137 CGCCAC-CGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | || ||| || |||| || || || | ||||||||||| || || | |||| Sbjct 44509198 TGTCAATCGTATCCGAGCTC---TCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCT 44509254 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| || ||||| Sbjct 44509255 TGACAAATATCTGCAT 44509270 >seq12 Length=146008498 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| |||||||| |||| || || |||| || ||||| || || ||||| Sbjct 24218494 TCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 24218435 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| ||||||||||| | ||| | || ||||||| | ||| |||| | || | | Sbjct 24218434 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTTACATT 24218376 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| ||| || || |||| |||||||| ||||| || || || || Sbjct 24218375 ATCGATGGTGTCAGAACTC---TCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTT 24218319 Query 42194 TACAAAGATTTGCATTTT 42211 || ||||| ||||| || Sbjct 24218318 GACGAAGATCTGCATCTT 24218301 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || |||||||| |||| || || |||| || ||||| || || ||||| Sbjct 24218950 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCTTCGAGCTGTTTGCCGGCGAAG 24218891 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| ||||||||||| | ||| | || ||||||| | ||| |||| | || | | Sbjct 24218890 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTTACATT 24218832 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| || || |||| |||||||| ||||| |||| || || Sbjct 24218831 ATCGATGGTGTCAGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTT 24218775 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 24218774 GACGAAGATCTGCAT 24218760 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || |||||||| |||| || || | || || ||||| || || ||||| Sbjct 24218722 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCGGCGAAG 24218663 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | ||| | || |||||||| |||||| || | | Sbjct 24218662 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTCACATTA 24218603 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| |||| || || |||| |||||||| ||||| |||| || || Sbjct 24218602 TCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTG 24218546 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 24218545 ACGAAGATCTGCAT 24218532 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || ||||| ||||| |||| || || | || || ||||| || || ||||| Sbjct 24219178 TCCTTCTGGATATTATAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAAG 24219119 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | ||| | || |||||||| |||||| |||| | Sbjct 24219118 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTG 24219059 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| |||| || || |||| |||||||| || || |||| || || Sbjct 24219058 TCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTACCGGTTAAGGTTTTG 24219002 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 24219001 ACGAAGATCTGCAT 24218988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542700692922960