Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 seq7 125 8e-24 seq6 122 1e-22 seq10 113 5e-20 seq9 113 5e-20 seq3 104 3e-17 seq4 95.1 1e-14 seq11 93.3 5e-14 >seq1 Length=147124936 Score = 131 bits (144), Expect = 2e-25 Identities = 148/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 22444457 TCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAG 22444516 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||| ||||||| || | || ||||||||| |||||| ||||| ||| Sbjct 22444517 ATAAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 22444575 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||| ||||| || || | || ||||| || ||||| || ||||| || Sbjct 22444576 GTCGATTGTATCGGAGGATTCAACCTCTAAGGTTATGGTCTTCCCCGTTAGGGTTTTGAC 22444635 Query 46582 AAAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 22444636 GAAGATCTGCATCTTG 22444651 >seq7 Length=127721098 Score = 125 bits (138), Expect = 8e-24 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| |||| ||||| || ||||||||| || || ||||| | Sbjct 44509272 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCA 44509331 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | |||| ||||||||||| ||||| || ||||| | ||| ||||| | || Sbjct 44509332 AGGGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGG 44509391 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | |||||| || |||||| ||| | | | |||||||| |||| ||| Sbjct 44509392 ATACCCTCCTTATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTC---TCC 44509448 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| ||| |||||||| || |||| ||||| ||||| || |||||| Sbjct 44509449 ACCTCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCATT 44509499 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||| |||||||||||||| | ||| || || |||| || Sbjct 44509062 ACAAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCTAGGGTTCGACCGTCCTCC 44509121 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || || ||||| | |||||| || | || | | |||||||||| Sbjct 44509122 AACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTGA 44509181 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| | ||| | | | | | ||| || |||| || || |||| |||||||| Sbjct 44509182 ATCTT-TGCTTTTACATTGTCAATCGTATCCGAGCTC---TCAACCTCCAGGGTGATGGT 44509237 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || |||| || || ||||| || ||||| Sbjct 44509238 TTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 44509270 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||||||||| || | ||| ||||||||||||||||||||||| | || | | Sbjct 86220602 CGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCCAATGTCCTACCA 86220543 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||| || || || | | |||||||| | || | | ||||||| Sbjct 86220542 TCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATACCCTCCTTG 86220483 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 || |||||| ||| | | | | || ||| ||| || |||| |||||| Sbjct 86220482 TCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTGATG 86220423 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || |||||||| ||||| Sbjct 86220422 GTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 86220388 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||| | || ||||| | || |||||||||||| |||||||| | Sbjct 44510410 TGCCACCCCTGAGACGAAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAG 44510469 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || || | || || ||||| || || ||||| || | | ||| ||||| | | Sbjct 44510470 CAAGGGTACGGCCATCCTCTAGCTGTTTCCCAGCGAAGATAAGCCTCTGTTGGTCAGGGG 44510529 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | |||||||| |||||| ||||| | | | |||||| ||||| Sbjct 44510530 GGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCCA 44510589 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| || || || || ||||| |||||||| ||||| Sbjct 44510590 CCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTTACAAAGATCTGCAT 44510638 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| || | |||||||| | || || || ||||| ||||| || Sbjct 44542847 TCCTTTTGGATGTTGTAATCAGCGAGAGTGCGGCCATCTTCAAGTTGCTTACCGGCAAAG 44542906 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||| ||||| | || | | ||| |||||| |||||| ||||| | | Sbjct 44542907 ATCAACCTCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTAGCCTTGA-CATT 44542965 Query 46523 GCCACCGTGTCGCTCGA--TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | || | || || | || || |||| || ||||| || || || || || |||| Sbjct 44542966 GTCAATG-GTATCTGAACTCTCAACCTCCAAAGTAATGGTCTTTCCGGTAAGAGTCTTAA 44543024 Query 46581 CAAAGATTTGCAT 46593 |||| |||||||| Sbjct 44543025 CAAATATTTGCAT 44543037 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||| | || ||||| | || || || ||||| || || || Sbjct 44543091 TCCTTTTGGATGATGTAGTCAGCCAGGGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAG 44543150 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||||||||| | | | | | |||||| ||| |||||| ||||| | | Sbjct 44543151 ATCAACCTCTGCTGGTCTGGCCGAATACCCTCCTTATCCTGGATCTTAGCCTTGA-CATT 44543209 Query 46523 GCCACCGTGTCGCTCGA--TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | || | || || | || || |||| || || || || || |||| || |||| Sbjct 44543210 GTCAATG-GTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTTCCTGTCAAGGTCTTAA 44543268 Query 46581 CAAAGATTTGCATT 46594 |||||||||||||| Sbjct 44543269 CAAAGATTTGCATT 44543282 >seq6 Length=121339338 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||| ||||| | || ||||| ||||| |||||||||| | Sbjct 51785663 CCTCCCCTAAGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCT 51785722 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| |||| ||||||||||| ||||| || || | |||||| ||||||| || Sbjct 51785723 AAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGG 51785782 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| |||||| |||| | | | |||||| || || || Sbjct 51785783 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACC 51785842 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | || ||||| || ||||| || ||||| || ||||||||||| || Sbjct 51785843 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 51785892 >seq10 Length=114683840 Score = 113 bits (124), Expect = 5e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||||| |||||||| | || ||||| ||||||||||| |||| | Sbjct 64671000 CCACCTCGAAGACGCAGGACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 64671059 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| ||| |||| ||||| ||||| |||||||| || | || |||||||| | ||| Sbjct 64671060 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 64671119 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | || |||||||| ||| || ||| ||| | | | |||||| |||| || Sbjct 64671120 ATGCCTTCCTTGTCTTGGAT-TTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTC---TC 64671175 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||| || || || || ||||| ||||| ||||||||||| Sbjct 64671176 GACCTCGAGAGTGATCGTCTTTCCGGTAAGCGTCTTAACGAAGATTTGCAT 64671226 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| |||| ||||| || ||||||||||| || ||||| | Sbjct 38460678 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCCGCA 38460619 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || || |||||||| ||||| || ||||| | ||||||||| | || Sbjct 38460618 AGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 38460559 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | |||||||||| |||||| ||| | | | | | | ||||| |||| || Sbjct 38460558 ATTCCCTCCTTGTCCTGAATCTTC-GCTTTAACATTGTCAATGGTGTCCGAGCTC---TC 38460503 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || | |||||| || ||||| || ||||| || || ||||| Sbjct 38460502 GACCTCCAGTGTTACGGTTTTACCAGTCAGGGTCTTAACGAATATCTGCAT 38460452 Score = 104 bits (114), Expect = 3e-17 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||| |||||||||||||| | |||||| || | || || Sbjct 38473284 ACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCCTCT 38473225 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || |||||||| | ||||||||| | || | | |||||||||| Sbjct 38473224 AACTGCTTACCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGA 38473165 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 || ||| || | | | | |||||| |||| ||||| |||| ||||| ||| Sbjct 38473164 ATTTTCGCTTTCACATTGTCGATCGTGTCTGAGCTC---TCCACCTCCAGGGTGATTGTT 38473108 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || || || ||||| Sbjct 38473107 TTCCCGGTCAAGGTCTTCACGAATATCTGCAT 38473076 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||| |||||||||||||| | |||||| || | || || Sbjct 38467344 ACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCCTCC 38467285 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || |||||||| | ||||||||| | || | | |||||||||| Sbjct 38467284 AACTGCTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGA 38467225 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| || | | | | ||||| |||| || || |||| ||||||||| Sbjct 38467224 ATCTTGGCTTTCACATTGTCAATGGTGTCCGAGCTC---TCGACCTCCAGGGTGATGGTT 38467168 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || || || ||||| Sbjct 38467167 TTACCGGTCAAGGTCTTCACGAATATCTGCAT 38467136 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| | || || |||| ||||| || || |||||||| Sbjct 64671263 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCGGCGAA 64671322 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | || | || |||||||| ||||||| ||| | ||| Sbjct 64671323 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTCGCCTTAA-CGT 64671381 Query 46522 CGCC-ACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||||| ||| || || || | ||||| || ||||| |||| |||| Sbjct 64671382 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGAGTGATTGTCTTGCCGGTCAAGGTTT 64671438 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||||||||| Sbjct 64671439 TCACGAAGATTTGCAT 64671454 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | |||| |||| |||| || |||||||||||| || || || | Sbjct 38460450 CCTCCTCGAAGGCGCAGAACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCA 38460391 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | | || ||||| ||||| || || || ||||| | ||||||||| | || Sbjct 38460390 AGAGTCCTCCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 38460331 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||||||||| |||||| |||| | | | | ||||| |||| ||| Sbjct 38460330 ATACCCTCCTTGTCTTGGATCTTGGTCTTCACGTTATCAATTGTGTCTGAGCTC---TCC 38460274 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| || || ||||| || |||| ||||| ||||| || |||||| Sbjct 38460273 ACCTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 38460223 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||||| |||| ||||| || ||||||||||| || || || | Sbjct 38467134 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38467075 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || ||||||||||| || || || ||||| | ||||||||| | || Sbjct 38467074 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 38467015 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | |||||| || |||||| ||| | | | | ||||| |||| ||| Sbjct 38467014 ATACCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATTGTGTCTGAGCTC---TCC 38466958 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| ||||| ||||| || |||| ||||| ||||| || |||||| Sbjct 38466957 ACCTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 38466907 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||||| |||| ||||| || ||||||||||| || || || | Sbjct 38472846 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38472787 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || ||||||||||| || || || ||||| | ||||||||| | || Sbjct 38472786 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 38472727 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | |||||| || |||||| ||| | | | | ||||| |||| ||| Sbjct 38472726 ATACCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATTGTGTCTGAGCTC---TCC 38472670 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| ||||| ||||| || |||| ||||| ||||| || |||||| Sbjct 38472669 ACCTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 38472619 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||| |||| || |||||||||||| || || || | || || | | | Sbjct 38460210 CGCAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCAAGCGTCCTCCCA 38460151 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||| ||||| || ||||| | |||||| || | || | | ||||||| Sbjct 38460150 TCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGTGGAATACCCTCCTTG 38460091 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTG 46555 ||| |||||| ||| | | | | || || ||| ||||| |||| ||| Sbjct 38460090 TCCTGAATCTTCGCCTTAACATTATCAATGGTATCAGAACTC---TCCACCTCCAAAGTG 38460034 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| || || || ||||| ||||| || ||||| Sbjct 38460033 ATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 38459996 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || |||| ||| | || || || | || |||||||||||| |||||||||| Sbjct 38459768 TGCCACCCCTTAGACGAAGGACTAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGG 38459709 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||||| || | || ||||| || || ||||| || || | | ||| ||||| | | Sbjct 38459708 CAAGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCAAAAATAAGCCTCTGTTGGTCTGGAG 38459649 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || || ||||| ||| || ||||| | | | || ||| ||||| Sbjct 38459648 GAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTATCAATAGTATCGGAGCTTTCCA 38459589 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||||||||| || || || ||||| |||||||| ||||| Sbjct 38459588 CCTCAAGGGTGATGGTTTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 38459540 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/199 (71%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| |||| | || || |||| || ||||| || |||||||| Sbjct 64671491 CTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCCTCAAGCTGTTTTCCGGCGAA 64671550 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||||| || ||| || ||| | ||| Sbjct 64671551 GATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCA-CGT 64671609 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | |||||| |||| || || || | ||||| || ||||| || || || | Sbjct 64671610 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTCT 64671666 Query 46578 TAACAAAGATTTGCATTTT 46596 |||| ||||| ||||| || Sbjct 64671667 TAACGAAGATCTGCATCTT 64671685 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| || ||||| || ||||||||||| | || ||| || | || || Sbjct 38460888 ACAAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCTGCTAAAGTTCGACCATCCTCC 38460829 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || || ||||| | ||||||||| | || | | |||||||||| Sbjct 38460828 AACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGA 38460769 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| || | | | | |||||| |||| ||||| |||| ||||||||| Sbjct 38460768 ATCTTAGATTTCACATTGTCAATCGTGTCCGAGCTC---TCCACCTCCAGGGTGATGGTT 38460712 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || || |||| || || || || || |||||| Sbjct 38460711 TTCCCAGTCAAGGTCTTCACGAATATCTGCATT 38460679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||||| |||| ||||| || ||||||||||| || || || | Sbjct 38473074 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38473015 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || ||||||||||| || || || ||||| | ||||||||| | || Sbjct 38473014 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 38472955 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | |||||||||| || ||| || | | | | ||||| |||| || Sbjct 38472954 ATCCCCTCCTTGTCCTGAATTTTCGCTTTCACATTGTCAATGGTGTCCGAGCTC---TCG 38472898 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| ||||||||||| || |||| || || || || || ||||| Sbjct 38472897 ACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 38472848 >seq9 Length=96604005 Score = 113 bits (124), Expect = 5e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| |||||||||||||||| || ||||| |||| || |||||||| |||||||| Sbjct 73174562 TCCTTCTGGATATTGTAGTCGGCTAAGGTGCGGCCGTCTTCAAGCTGCTTCCCGGCGAAG 73174503 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||| || || |||| || | || |||||||| |||||| |||| | Sbjct 73174502 ATAAGGCGTTGTTGATCGGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTG 73174443 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || || | || |||||||| ||||| || ||||| || Sbjct 73174442 TCGATGGTGTCGGAAGACTCGACCTCAAGGGTTATGGTTTTCCCCGTTAGGGTTTTGACG 73174383 Query 46583 AAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 73174382 AAGATCTGCATCTTG 73174368 >seq3 Length=102937913 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||||| ||| ||||| | || ||||| ||||| |||||||| Sbjct 37625856 TCCTTTTGGATGTTGTAGTCGGCTAGGGTGCGGCCATCTTCGAGTTGCTTACCGGCGAAG 37625915 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||| || ||||| | || | || || ||||| |||||| |||| | Sbjct 37625916 ATGAGGCGTTGTTGGTCCGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCTTTGACATTG 37625975 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || || | || ||||| || ||||| || ||||| || Sbjct 37625976 TCGATGGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACG 37626035 Query 46583 AAGATTTGCATT 46594 ||||| |||||| Sbjct 37626036 AAGATCTGCATT 37626047 >seq4 Length=137675496 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| || ||||| | || ||||| |||||||||||||| Sbjct 135762797 TCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 135762856 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | || |||||||| |||||| |||| | Sbjct 135762857 ATAAGACGTTGTTGGTCAGGTGGAATGCCTTCCTTGTCTTGGATCTTAGCTTTGACATTG 135762916 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || || || || | || || || || |||||||| ||||| || Sbjct 135762917 TCAATGGTGTCCGAAGACTCGACCTCTAGGGTTATAGTCTTCCCCGTCAGGGTTTTGACG 135762976 Query 46583 AAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 135762977 AAGATCTGCATCTTG 135762991 >seq11 Length=105699404 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| || || || | || || || |||| |||||||| ||||| ||||| Sbjct 76982538 TCTTTCTGGATGTTATAATCAGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAA 76982479 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||||| || | | |||||||| |||||| ||||| ||| Sbjct 76982478 ATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 76982420 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| ||| || || | || ||||| ||||| || || ||||| || Sbjct 76982419 GTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCAC 76982360 Query 46582 AAAGATTTGCATTTT 46596 |||||| ||||| || Sbjct 76982359 AAAGATCTGCATCTT 76982345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564705528563880