Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq10 107 1e-18 seq7 105 4e-18 seq11 96.9 2e-15 seq13 93.3 3e-14 seq12 89.7 3e-13 seq6 82.4 5e-11 seq1 82.4 5e-11 >seq10 Length=114683840 Score = 107 bits (118), Expect = 1e-18 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| || | | ||||||||| || | ||| ||| || || ||||||||||||| Sbjct 38460680 TTCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCCG 38460621 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| | | |||| || ||||| ||||||||||| || | | ||||||||| | | Sbjct 38460620 CAAGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAG 38460561 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-C 34928 | | ||||||||||| ||||||| ||| || || | || || | ||| || | Sbjct 38460560 GAATTCCCTCCTTGTCCTGAATCTTCGCTTTAAC--AT--TGTCAATGGTGTCCGAGCTC 38460505 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | |||| |||||| || || || ||||| || || |||||||| Sbjct 38460504 TCGACCTCCAGTGTTACGGTTTTACCAGTCAGGGTCTTAACGAATATCTGCAT 38460452 Score = 96.9 bits (106), Expect = 2e-15 Identities = 155/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||||||||| || | || ||| || || |||||||| |||| |||| | | |||| Sbjct 38473060 CAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCAAGGGTCCTCCCATC 38473001 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || | | ||||||||| | || | |||||||||||| Sbjct 38473000 CTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 38472941 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTA 34944 ||| ||| ||| || || | || || | ||| || ||| || || | ||| | Sbjct 38472940 CTGAATTTTCGCTTTCAC--AT--TGTCAATGGTGTCCGAGCTCTCGACCTCCAGGGTGA 38472885 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||| || || | |||||||| || |||||||| Sbjct 38472884 TGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 38472848 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||||||||||| ||| |||| |||| || ||||| ||||| ||||| Sbjct 38472355 TTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 38472296 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | | |||||||| | || | ||| ||||| || |||||| || || Sbjct 38472295 AATCAACCTCTGCTGGTCCAGTGGGATCCCTTCCTTATCCTGAATCTTGGCCTTAACATT 38472236 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| ||| ||| || || | || || |||||||| ||||| || || || Sbjct 38472235 ATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGTTTTTCCGGTGAGGGTTTTTAC 38472176 Query 34970 AAAGATCTGCAT 34981 ||| |||||||| Sbjct 38472175 AAAAATCTGCAT 38472164 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCA 34847 ||| |||||||| || ||||| | |||| |||| |||| |||| ||| ||||| ||| Sbjct 38460871 TTCCTTCTGAATATTGTAGTCTGCTAAAG--TTCGACCATCCTCCAACTGCTTTCCAGCA 38460814 Query 34848 AATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG 34907 || || | | |||||||| | || | |||||||||||| |||||| ||| || Sbjct 38460813 AAGATCAACCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGAATCTTAGATTTCACA 38460754 Query 34908 GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | |||| || | ||| || || | ||| |||||||| || || | |||||| Sbjct 38460753 TTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTC 38460694 Query 34968 ACAAAGATCTGCAT 34981 || || |||||||| Sbjct 38460693 ACGAATATCTGCAT 38460680 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || |||||||| |||| ||| | | |||| || Sbjct 38460204 ACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCAAGCGTCCTCCCATCCTCG 38460145 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || | | ||||| ||| | || | ||||||||||| | Sbjct 38460144 AGCTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGTGGAATACCCTCCTTGTCCTGA 38460085 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || || |||| || ||| ||| || || | || ||||| Sbjct 38460084 ATCTTCGCCTTAAC--AT--TATCAATGGTATCAGAACTCTCCACCTCCAAAGTGATGGT 38460029 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||| ||||| || || ||||| |||||||| Sbjct 38460028 TTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 38459996 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||||||||| || | ||| |||| |||| || ||||| ||||| ||||| Sbjct 38466643 TTCCTTCTGAATGTTATAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 38466584 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | | |||||||| | || | ||| ||||| || |||||| || || Sbjct 38466583 AATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGAATCTTGGCCTTAACATT 38466524 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| ||| ||| || || | || || |||||||| ||||| || || || Sbjct 38466523 ATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGTTTTTCCAGTGAGGGTTTTTAC 38466464 Query 34970 AAAGATCTGCAT 34981 ||| |||||||| Sbjct 38466463 AAAAATCTGCAT 38466452 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||| || ||||| || | ||| | | |||| || Sbjct 38466888 ACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCTGCAAGTGTCCTACCATCTTCG 38466829 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || | | ||||| ||| | || | ||| |||||||| Sbjct 38466828 AGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGG 38466769 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| || | || | ||| |||||| || | || || || ||| Sbjct 38466768 ATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACTTCCAAAGTAATAGTCTTT 38466709 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||||||||| || ||||| Sbjct 38466708 CCGGTGAGAGTCTTCACAAAAATTTGCAT 38466680 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | || |||| |||| |||| ||| || || |||||| Sbjct 38467326 TCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCATCCTCCAACTGCTTCCCAGCAAAT 38467267 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||||||| | || | |||||||||||| |||||| ||| || || Sbjct 38467266 ATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCAC--AT 38467209 Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | || || | ||| || ||| || || | ||| |||||||| || || | ||||| Sbjct 38467208 --TGTCAATGGTGTCCGAGCTCTCGACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTT 38467151 Query 34967 CACAAAGATCTGCAT 34981 ||| || |||||||| Sbjct 38467150 CACGAATATCTGCAT 38467136 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||| || ||||| || | ||| | | |||| || Sbjct 38472600 ACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCTGCAAGTGTCCTACCATCTTCG 38472541 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || | | ||||| ||| | || | ||| |||||||| Sbjct 38472540 AGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGG 38472481 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| || | || | ||| |||||| || | || || || ||| Sbjct 38472480 ATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACTTCCAAAGTAATAGTCTTT 38472421 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||||||||| || ||||| Sbjct 38472420 CCGGTGAGAGTCTTCACAAAAATTTGCAT 38472392 >seq7 Length=127721098 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| ||||| || | || ||| || |||||||||||||| | |||| ||| |||| Sbjct 44509742 CAACACCAAATGGAGGGTAGATTCCTTTTGAATGTTATAGTCTGCAAGGGTTCTGCCATC 44509801 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || ||||| || ||||| |||| | ||||||||| | || | ||||||||||| Sbjct 44509802 TTCAAGTTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTC 44509861 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || ||| | || | ||| ||| || || | || ||||| Sbjct 44509862 CTGAATCTTGGACTTAACGTTATCAATTGTATCAGAACTCTCCACCTCTAAAGTGATGGT 44509921 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||| ||||| || || |||||||||||||| Sbjct 44509922 TTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 44509954 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||||||||||| ||||| || | |||| | | |||| ||| Sbjct 44509518 ACCAAGTGGAGGGTTGACTCTTTCTGAATATTATAATCAGCAAGGGTCCTCCCATCCTCC 44509577 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | || || || | || | || |||||||| Sbjct 44509578 AGCTGCTTGCCAGCAAAAATCAGCCTCTGTTGATCCGGTGGAATACCTTCCTTGTCCTGG 44509637 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| || | |||| ||| |||||| || | ||| || || ||| Sbjct 44509638 ATCTTAGCTTTCACATTGTCAATCGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTT 44509697 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||||||||| | |||||| Sbjct 44509698 CCTGTGAGGGTCTTCACAAAAACTTGCATA 44509727 >seq11 Length=105699404 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| |||||||| || | |||| | || | || || |||||||| || || || Sbjct 76982539 TTCTTTCTGGATGTTATAATCAGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAA 76982480 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||| |||||||| ||||| |||||| Sbjct 76982479 AATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 76982420 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | || || |||| |||||||| || || || || || ||||| Sbjct 76982419 GTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCAC 76982360 Query 34970 AAAGATCTGCATATTC 34985 |||||||||||| ||| Sbjct 76982359 AAAGATCTGCATCTTC 76982344 >seq13 Length=144148110 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| || ||||| ||||| || || | |||| | | |||| || Sbjct 116705690 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTCCCATCCTC 116705631 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| |||||||| || | ||||||||| | || | || ||||| || Sbjct 116705630 TAGCTGCTTTCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTATCTTG 116705571 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATT----CACCGGCCTCAACATCGACGGTTATGG 34947 || || || || || |||||||| || | |||||| || | ||| |||| Sbjct 116705570 AACTTTGGCCTTAAC--AT--TATCGATTGTGTCAGAGCTCTCAACTTCCAGGGTGATGG 116705515 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || || ||||||||||| ||||||||| Sbjct 116705514 TCTTCCCAGTAAGTGTCTTCACAAAAATCTGCATA 116705480 >seq12 Length=146008498 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | | | | || |||| || |||||||||||||| || Sbjct 12766951 TCCTTCTGGATGTTGTAATCGGCCAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAG 12767010 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||| |||||| | || | ||| |||||||| || ||| || ||| Sbjct 12767011 ATGAGACGTTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATTTTCGCCTTAACGTTG 12767070 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || ||| || |||| ||| ||||| || || || || ||||| || Sbjct 12767071 TCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACG 12767130 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 12767131 AAGATCTGCATCTT 12767144 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | | ||||||||| | ||||| || ||| ||||| |||||||| || | Sbjct 24219442 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAGCC 24219383 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | | |||| || ||||| || || ||||| || | ||||| |||||| | || Sbjct 24219382 AAGGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGTGGG 24219323 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCGGCCTCAA 34932 | ||| |||||||| ||||||| || || || | ||||| | ||| ||| Sbjct 24219322 ATCCCTTCCTTGTCTTGAATCTTCGCCTTTAC--AT--TGTCGATGGTGTCCGAACTCTC 24219267 Query 34933 CA--TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| ||||| || || || | || ||||| ||||||||||| Sbjct 24219266 CACCTCTAAGGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 24219216 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 |||||| ||||| || | ||| || ||||| ||||| || || | | | | || | Sbjct 12766698 CCTCAATACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACC 12766757 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 || || || ||||| ||||||||||| || | |||||||||| | || | || ||||| Sbjct 12766758 GTCCTCGAGTTGTTTCCCGGCAAATATGAGCCTTTGCTGGTCTGGTGGGATGCCTTCCTT 12766817 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| ||||| |||||| | || | ||| | || || || | ||||| Sbjct 12766818 GTCTTGGATCTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACTTCCAAAGTTAT 12766877 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || || || || || || ||||||||||| Sbjct 12766878 GGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 12766913 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| || || | | | | || | || || |||||||| ||||| || Sbjct 24218495 TTCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAA 24218436 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||||||| | || | || |||||||| ||| || || || | Sbjct 24218435 GATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTAC--A 24218378 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| ||| |||||| |||| ||| ||||| || || || || || | Sbjct 24218377 T--TATCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTT 24218320 Query 34966 TCACAAAGATCTGCATATT 34984 | || ||||||||||| || Sbjct 24218319 TGACGAAGATCTGCATCTT 24218301 >seq6 Length=121339338 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| | | | | || | || || ||||| ||||||||||| Sbjct 51785698 TTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAA 51785757 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || ||||| | || | || |||||||| ||||| |||||| | Sbjct 51785758 GATGAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGAC--A 51785815 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| || | |||||| || | ||||||||| || ||||| || || | Sbjct 51785816 T--TGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTT 51785873 Query 34966 TCACAAAGATCTGCATATT 34984 | || ||||| ||||| || Sbjct 51785874 TGACGAAGATTTGCATCTT 51785892 >seq1 Length=147124936 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| | | | | || | || || ||||| || ||||| || Sbjct 22444456 TTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAA 22444515 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || ||||| | || | ||||||||||| ||||| |||||| Sbjct 22444516 GATAAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 22444575 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || || ||||| || | ||||||||| || ||||| || || || || Sbjct 22444576 GTCGATTGTATCGGAGGATTCAACCTCTAAGGTTATGGTCTTCCCCGTTAGGGTTTTGAC 22444635 Query 34970 AAAGATCTGCATATT 34984 ||||||||||| || Sbjct 22444636 GAAGATCTGCATCTT 22444650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324335206838232