Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq10 131 3e-25 seq7 127 4e-24 seq6 113 8e-20 seq9 104 4e-17 seq3 100 5e-16 seq2 100 5e-16 seq12 96.9 6e-15 >seq10 Length=114683840 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | ||||| || || || | || | ||| || || || |||||| Sbjct 38459769 ATGCCACCCCTTAGACGAAGGACTAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCG 38459710 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | |||| ||| || | |||||||||||||||||| | |||||||| || ||| Sbjct 38459709 GCAAGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCAAAAATAAGCCTCTGTTGGTCTGGA 38459650 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||||| || | ||| |||||||||||| || Sbjct 38459649 GGAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTATCAATAGTATCGGAGCTTTCC 38459590 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || |||||||| || || ||||| ||||| || ||||| Sbjct 38459589 ACCTCAAGGGTGATGGTTTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 38459540 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | ||||| || || || | |||| |||||| || || || || Sbjct 38472165 ATCCCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAATCT 38472106 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || ||| ||| || | |||||||||||||||||| || ||||| ||||| || Sbjct 38472105 GCAAGTGTCCTACCATCTTCGAGTTGTTTTCCGGCAAAAATCAACCTCTGCTGATCTGGT 38472046 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| ||||||||||| ||| Sbjct 38472045 GGAATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATAGTATCGGAGCTCTCC 38471986 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || ||||| || || ||||||||||| || ||||| Sbjct 38471985 ACCTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTTACAAAGATCTGCAT 38471936 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | ||||| || || || | || | ||| || ||||| |||||| Sbjct 38471709 ATGCCACCCCTTAGACGAAGCACTAGGTGGAGGGTGGACTCCTTTTGGATATTGTAGTCG 38471650 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | |||| ||| || | ||||||||||||||| || | || ||||| |||||| Sbjct 38471649 GCAAGAGTTCGGCCATCCTCAAGTTGTTTTCCGGCAAAGATAAGCCTTTGTTGGTCAGGA 38471590 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||| | || | ||| |||||||| ||| || Sbjct 38471589 GGAATCCCTTCTTTGTCTTGGATTTTAGCCTTGACATTATCGATAGTATCAGAACTTTCT 38471530 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || ||||| || || ||||| ||||| || ||||| Sbjct 38471529 ACCTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 38471480 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | ||||| || || || | || | ||| || ||||| |||||| Sbjct 38466225 ATGCCACCCCTTAGACGAAGCACTAGGTGGAGGGTGGACTCCTTTTGGATATTGTAGTCG 38466166 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | |||| ||| || | ||||||||||||||| || | || ||||| |||||| Sbjct 38466165 GCAAGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCAAAGATAAGCCTTTGTTGGTCAGGA 38466106 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||| | || | ||| |||||||| ||| || Sbjct 38466105 GGGATCCCTTCTTTGTCTTGGATTTTAGCCTTGACATTATCGATAGTATCAGAACTTTCT 38466046 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || ||||| || || || || ||||| || ||||| Sbjct 38466045 ACCTCAAGGGTGATGGTCTTACCAGTAAGGGTCTTCACAAAGATCTGCAT 38465996 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | || ||| || |||| |||| || | ||| || || ||||| || Sbjct 38460225 ATTCCACCACGCAGTCGCAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCC 38460166 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||| || ||| || | || |||||||||||||| || ||||| ||||| || Sbjct 38460165 GCAAGCGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGT 38460106 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || || || || || | || | ||| ||| ||||| ||| ||| Sbjct 38460105 GGAATACCCTCCTTGTCCTGAATCTTCGCCTTAACATTATCAATGGTATCAGAACTCTCC 38460046 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || ||||| || || || |||||||||||||| ||||| Sbjct 38460045 ACCTCCAAAGTGATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 38459996 Score = 98.7 bits (108), Expect = 2e-15 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| | | ||| | |||| ||| | || | || || ||| || Sbjct 38466688 AATTTGCATGCCACCACGGAGTCGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTT 38466629 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || | | |||| ||| || | || ||||| |||||||| || ||||| || Sbjct 38466628 ATAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTG 38466569 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || ||||| ||||| || || |||| || | ||| ||| ||||| || Sbjct 38466568 GTCCGGTGGGATCCCTTCCTTATCCTGAATCTTGGCCTTAACATTATCAATCGTATCAGA 38466509 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || | || |||||||| || || || ||||||||||| || ||||| Sbjct 38466508 ACTCTCCACCTCCAACGTAATAGTTTTTCCAGTGAGGGTTTTTACAAAAATCTGCAT 38466452 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| |||||||| | | |||| ||| || | || ||||| |||||||| || || Sbjct 38472346 AATGTTATAGTCCGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCT 38472287 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| || || | || || ||||| ||||| || || |||| || | ||| ||| || Sbjct 38472286 CTGCTGGTCCAGTGGGATCCCTTCCTTATCCTGAATCTTGGCCTTAACATTATCAATCGT 38472227 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| ||| ||| || || | || |||||||| || || || ||||||||||| || || Sbjct 38472226 ATCAGAACTCTCCACCTCCAACGTAATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTG 38472167 Query 193358 CAT 193360 ||| Sbjct 38472166 CAT 38472164 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||| | || | |||| ||||| || | || || || |||||||| Sbjct 38460681 ATTCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCC 38460622 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||| || ||| || | || |||||||||||||| || ||||| || || ||| Sbjct 38460621 GCAAGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGA 38460562 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| || || || || || || | ||| | ||| ||| || || || ||| Sbjct 38460561 GGAATTCCCTCCTTGTCCTGAATCTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCG 38460502 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || |||| |||||||| || || || || || ||||| ||||| Sbjct 38460501 ACCTCCAGTGTTACGGTTTTACCAGTCAGGGTCTTAACGAATATCTGCAT 38460452 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || || || | || | ||| || |||||| || || | || || || Sbjct 64670784 CGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCG 64670843 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || |||||||| || || || ||||| || || ||||||||||| Sbjct 64670844 TCTTCCAGTTGTTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTG 64670903 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | ||| | || ||| ||||| || ||| ||||||| ||| || Sbjct 64670904 TCCTGAATCTTCGCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATC 64670963 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || | || || || || || ||||| Sbjct 64670964 GTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 64670998 >seq7 Length=127721098 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || |||| ||| | |||| ||| || |||||||| ||| Sbjct 86220389 ATACCACCACGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCG 86220330 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || || ||| || | ||||||||| |||||||| ||||| ||||| || || Sbjct 86220329 GCAAGAGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGT 86220270 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| || || || |||| ||| | ||| ||| ||||| ||| ||| Sbjct 86220269 GGGATTCCTTCTTTGTCCTGAATCTTGGCTTTCACATTATCAATGGTATCCGAACTCTCC 86220210 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | || || || || || || || ||||| ||||| |||||||| Sbjct 86220209 ACCTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 86220160 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | ||||| || || || | |||| |||||| || || ||||| Sbjct 44509953 ATGCCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCA 44510012 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || ||||||||||| ||||| || | |||||||| |||||| Sbjct 44510013 GCAAGGGTGCGGCCATCCTCCAATTGTTTTCCAGCAAAGATAAGCCTCTGTTGGTCAGGA 44510072 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| || |||| || | ||| ||| || ||||| || Sbjct 44510073 GGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCC 44510132 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || || ||||| |||||||||||||| Sbjct 44510133 ACTTCAAGGGTGATTGTCTTGCCAGTAAGAGTTTTGACAAATATTTGCAT 44510182 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | |||| ||| | |||| || || ||| |||||||| Sbjct 44509725 ATACCACCACGAAGACGCAACACCAAATGGAGGGTAGATTCCTTTTGAATGTTATAGTCT 44509784 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || | |||||| || ||||||||||| ||||| || || || Sbjct 44509785 GCAAGGGTTCTGCCATCTTCAAGTTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGT 44509844 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || || || || |||| || | || ||| ||||| ||| ||| Sbjct 44509845 GGGATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTATCAATTGTATCAGAACTCTCC 44509904 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||| ||| || ||||| || || |||||||||||||| || ||||| Sbjct 44509905 ACCTCTAAAGTGATGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 44509954 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | || ||||| |||| || | || | |||||| ||||||||| || Sbjct 44509497 ATTCCACCACGCAGGCGAAGCACCAAGTGGAGGGTTGACTCTTTCTGAATATTATAATCA 44509556 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || || ||| || | || || || |||||||| | ||||||||||| || Sbjct 44509557 GCAAGGGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGCCTCTGTTGATCCGGT 44509616 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || || | ||| | ||| ||| ||||| ||| |||| Sbjct 44509617 GGAATACCTTCCTTGTCCTGGATCTTAGCTTTCACATTGTCAATCGTATCAGAACTCTCA 44509676 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || ||||| || ||||| || || || ||||| | |||||| Sbjct 44509677 ACTTCCAAGGTAATAGTCTTTCCTGTGAGGGTCTTCACAAAAACTTGCAT 44509726 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||| | || | |||| ||||| || | ||| || ||| |||||||| Sbjct 44509269 ATCCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCC 44509328 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || || || || | || |||||||||||||| || |||||||| ||||| Sbjct 44509329 GCAAGGGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGT 44509388 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || |||||||| || |||| || | ||| || || ||||| ||| Sbjct 44509389 GGGATACCCTCCTTATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTCTCC 44509448 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || | || || |||||||| || | ||||| |||||||| |||||| Sbjct 44509449 ACCTCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCATT 44509499 Score = 96.9 bits (106), Expect = 6e-15 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||||| ||||| ||||| |||| |||| || | ||| || ||| || Sbjct 44543502 ATTTGCATACCACTCCTCAAACGAAGGACCAAGTGCAGGGTGGACTCCTTCTGAATGTTG 44543561 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| | | || | | || |||| || || | ||||| || | ||||||||| Sbjct 44543562 TAGTCAGCAAGTGTACGACCATATTCTAGCTGCTTACTAGCAAAGATAAGCCTCTGTTGA 44543621 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 | || || ||||||||||||||||| || || | || | ||| || || ||||| Sbjct 44543622 TTTGGTGGGATTCCTTCTTTATCTTGGATCTTTGCCTTGACATTATCGATGGTGTCGGAG 44543681 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || || || || || ||||| |||||||| Sbjct 44543682 CTTTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 44543737 Score = 93.3 bits (102), Expect = 8e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| || |||||||| || || |||||||| || || || || || ||||| Sbjct 44542882 ATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCTTT 44542941 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 || || || || | || | ||| ||| ||||| ||| |||||| || | ||| || Sbjct 44542942 GTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAAT 44543001 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || |||||||||||||| Sbjct 44543002 GGTCTTTCCGGTAAGAGTCTTAACAAATATTTGCAT 44543037 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | ||||| || ||||| | || | ||| || || || ||||| Sbjct 44510409 ATGCCACCCCTGAGACGAAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCA 44510468 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| |||| ||||| || || || || | |||||||| ||||| Sbjct 44510469 GCAAGGGTACGGCCATCCTCTAGCTGTTTCCCAGCGAAGATAAGCCTCTGTTGGTCAGGG 44510528 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| ||| || ||||| || Sbjct 44510529 GGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCC 44510588 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || ||||| || || ||||||||||| || ||||| Sbjct 44510589 ACCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTTACAAAGATCTGCAT 44510638 >seq6 Length=121339338 Score = 113 bits (124), Expect = 8e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || ||||||| ||| || | || || | || ||||||||||| || | | | Sbjct 51785708 ATGTTGTAGTCGGCTAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGGCGC 51785767 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || || ||||| || ||||| || |||| ||| | ||| || || Sbjct 51785768 TGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTG 51785827 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 |||||||||||||| ||||| ||||| || || || ||||| ||||| || || |||||| Sbjct 51785828 TCGGAAGACTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGC 51785887 Query 193359 ATTTT 193363 || || Sbjct 51785888 ATCTT 51785892 >seq9 Length=96604005 Score = 104 bits (114), Expect = 4e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| ||||||| ||| || | || || | || || ||||| || || | | Sbjct 73174553 ATATTGTAGTCGGCTAAGGTGCGGCCGTCTTCAAGCTGCTTCCCGGCGAAGATAAGGCGT 73174494 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| ||||| || ||||| || ||||| || |||| ||| | ||| || || Sbjct 73174493 TGTTGATCGGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTG 73174434 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||||||||| || || || ||||| ||||| || ||||| ||||| || || || ||| Sbjct 73174433 TCGGAAGACTCGACCTCAAGGGTTATGGTTTTCCCCGTTAGGGTTTTGACGAAGATCTGC 73174374 Query 193359 ATTTT 193363 || || Sbjct 73174373 ATCTT 73174369 >seq3 Length=102937913 Score = 100 bits (110), Expect = 5e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || ||||||| || || | ||| || | ||| || ||||| || || | | Sbjct 37625865 ATGTTGTAGTCGGCTAGGGTGCGGCCATCTTCGAGTTGCTTACCGGCGAAGATGAGGCGT 37625924 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || || |||||||| ||||| || |||| ||| | ||| || || Sbjct 37625925 TGTTGGTCCGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTG 37625984 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||||||||| || ||||| ||||| || || || ||||| ||||| || || || ||| Sbjct 37625985 TCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGC 37626044 Query 193359 ATT 193361 ||| Sbjct 37626045 ATT 37626047 >seq2 Length=101023042 Score = 100 bits (110), Expect = 5e-16 Identities = 165/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 || ||| | |||||| | | || || || ||||| | |||||||| || |||| | Sbjct 44354465 AACTTAAACACCACCACGAAGGCGTAGGACAAGATGAAGAGTAGCCTCCTTCTAAATGTG 44354406 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || | | |||||| ||| || | ||| || || ||||||||||| |||| ||| Sbjct 44354405 ATAATCTGCAAGAGTTCTACCATCCTCCAGTTGCTTCCCAGCAAAAATTAACCTCTATTG 44354346 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || ||||| |||| || || || || | || ||| ||||| || Sbjct 44354345 GTCTGG-GGCATCCCTTCCTTATACTGGATCTTTTCCTTCACGTTATCAATGGTATCTGA 44354287 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||||| |||| || || || ||||||| || || ||||| || ||||| Sbjct 44354286 ACTTTCAACTTCCGGAGTGATTGTCTTTCCTGTTAAGGTCTTCACAAAGATCTGCAT 44354230 Score = 96.9 bits (106), Expect = 6e-15 Identities = 158/226 (70%), Gaps = 10/226 (4%) Strand=Plus/Minus Query 193145 TCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGA 193204 |||||| |||| ||| | || | |||||| ||||||||| || | | || || Sbjct 44353994 TCGAAGAACCAAATGAAGAGTTGACTCTTTTTGAATATTATAATCAGCAAGAGTCCTTCC 44353935 Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCT---CTG--TTGATCAGGAGGT-----A 193254 ||| || | ||||| ||| |||||||||||||| ||| ||| | || || | Sbjct 44353934 ATCCTCAAGTTGTTCTCCTGCAAAAATTAATCTTTACTGGTTTGGGCCGGGGGGGGGGGA 44353875 Query 193255 TTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTT 193314 | || ||||| || || |||||| ||| | | | |||||||| ||| |||||||| Sbjct 44353874 TACCCTCTTTTTCCTGAATTTTGTCTTTCACAATATCAATAGTATTTGAACTCTCAACTT 44353815 Query 193315 CTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | | || || ||||| || || || || || |||||||||||||| Sbjct 44353814 CCAATGTAATTGTTTTTCCAGTGAGGGTCTTGACAAATATTTGCAT 44353769 >seq12 Length=146008498 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || | || || || ||| || |||||||| || || ||||| || || Sbjct 12766503 AATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCT 12766562 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || ||||| || || ||||||||||| || || || || | || | ||| || || Sbjct 12766563 TTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTCGCCTTAACATTGTCGATCGT 12766622 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||||||| ||| || || | |||||| ||||| || || | ||| || || || || || Sbjct 12766623 ATCGGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGTCAACGTCTTGACGAAAATCTG 12766682 Query 193358 CAT 193360 ||| Sbjct 12766683 CAT 12766685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898806262060080