Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq9 138 2e-27 seq10 120 4e-22 seq7 120 4e-22 seq1 107 3e-18 seq12 105 1e-17 seq2 96.9 5e-15 >seq9 Length=96604005 Score = 138 bits (152), Expect = 2e-27 Identities = 363/553 (66%), Gaps = 9/553 (2%) Strand=Plus/Minus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 || || || |||||| ||| | ||||||||||| || ||||| ||||| || ||| Sbjct 49336393 AAGCAAGCGAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTT 49336334 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || |||||||||| || || ||||||| ||||||||| | |||||| | || || Sbjct 49336333 AATCCGGGCATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAA 49336274 Query 18275 AATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTC 18334 || || ||||| ||||| || || || ||||| | ||| || || | || | | | Sbjct 49336273 AAGATCCCCTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAA-----AGTTTCTCCGC 49336219 Query 18335 AGT--ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAG 18392 || |||||||| ||||| || ||| | |||||| | |||| || | Sbjct 49336218 CGTCGATCCATTTCATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGG 49336159 Query 18393 CATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAAT 18452 | || | | | ||||| | |||||||||||| ||||| |||| | | | | Sbjct 49336158 CGCGGAAAAGACGGTTCTTTTCGTCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGT 49336099 Query 18453 ACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGG 18512 |||| || || || || |||| ||||| || || |||| |||||| | | ||||||| Sbjct 49336098 ACATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGG 49336039 Query 18513 -GATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCA 18571 ||| ||| | ||| | || | | | | |||||| ||||| || || | Sbjct 49336038 AGAT-TTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAG 49335980 Query 18572 GATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTC 18631 | || ||||| || | ||| | ||||||| || | || | | | ||||| | | Sbjct 49335979 GCGGCAAAAAAGGCGAGAACGTGACTAATGAAGTGGTGCTCGTCAGCGGTGAGAGCTTCC 49335920 Query 18632 CATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCC 18691 || | | | | | || ||||| ||||| || | |||||||| || | |||||| Sbjct 49335919 CAGTGACGAAGAACGGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCT 49335860 Query 18692 TGTTTGTACATTT 18704 | |||||||||| Sbjct 49335859 TTCTTGTACATTT 49335847 >seq10 Length=114683840 Score = 120 bits (132), Expect = 4e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | ||||||||||||||||| || || || || |||| Sbjct 38466452 ATGCAGATTTTTGTAAAAACCCTCACTGGAAAAACTATTACGTTGGAGGTGGAGAGTTCT 38466511 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || || ||||| ||||| || || || || || Sbjct 38466512 GATACGATTGATAATGTTAAGGCCAAGATTCAGGATAAGGAAGGGATCCCACCGGACCAG 38466571 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| ||| || |||||||| |||||| | ||||| | | |||||||| Sbjct 38466572 CAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACTCTTGCTGATTATAAC 38466631 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGA 156038 || || || |||| || ||||| |||||| || Sbjct 38466632 ATTCAGAAGGAATCGACCCTCCATTTGGTGTTACGA 38466667 Score = 118 bits (130), Expect = 2e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || | || ||||| |||||||| || ||||| || |||| Sbjct 38466680 ATGCAAATTTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAAGTTGAGAGTTCT 38466739 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| ||| || || || || ||||| || || ||||| || Sbjct 38466740 GACACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCAG 38466799 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| ||| || || |||||||||||| || || | ||||||||||| Sbjct 38466800 CAGAGGTTGATTTTTGCTGGCAAACAGCTCGAAGATGGTAGGACACTTGCAGATTATAAT 38466859 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || |||||| | || ||||| || ||| Sbjct 38466860 ATCCAGAAAGAGTCTACCCTTCACTTGGTG 38466889 Score = 118 bits (130), Expect = 2e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || | || ||||| |||||||| || ||||| || |||| Sbjct 38472392 ATGCAAATTTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAAGTTGAGAGTTCT 38472451 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| ||| || || || || ||||| || || ||||| || Sbjct 38472452 GACACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCAG 38472511 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| ||| || || |||||||||||| || || | ||||||||||| Sbjct 38472512 CAGAGGTTGATTTTTGCTGGCAAACAGCTCGAAGATGGTAGGACACTTGCAGATTATAAT 38472571 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || |||||| | || ||||| || ||| Sbjct 38472572 ATCCAGAAAGAGTCTACCCTTCACTTGGTG 38472601 Score = 111 bits (122), Expect = 2e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | ||||| ||||||||||||||||||||||| || || || || Sbjct 38460223 AATGCAGATTTTTGTGAAAACTTTGACTGGAAAAACTATTACATTGGAGGTGGAGAGCTC 38460282 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| |||||||| | || || ||||| || || || || || || || || Sbjct 38460283 AGACACAATTGATAACGTGAAGACCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCA 38460342 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||||| ||| || ||||| ||||| ||| || ||| | | ||||||| Sbjct 38460343 GCAGAGGTTGATTTTTGCTGGAAAGCAACTCGAGGATGGGAGGACTCTTGCGGATTATA- 38460401 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGT 156031 | ||||||| ||| | || || || || || Sbjct 38460402 -ACATCCAAAAGGAGTCAACCCTGCACTTGGT 38460432 Score = 107 bits (118), Expect = 3e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | ||||| ||||||||||||||||| ||||| || || || || Sbjct 38466907 AATGCAGATTTTTGTGAAAACTTTGACTGGAAAAACTATCACATTGGAGGTGGAGAGCTC 38466966 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||||| || || |||||||| || || || || || || || Sbjct 38466967 AGACACAATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACCA 38467026 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||||| ||| || ||||||||||| ||| || || | | ||||||| Sbjct 38467027 GCAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGAGGACCCTTGCGGATTATA- 38467085 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 | ||||||| || |||| || ||||| || || Sbjct 38467086 -ACATCCAAAAGGAATCGACCCTGCATTTGGTTTT 38467119 Score = 107 bits (118), Expect = 3e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | ||||| ||||||||||||||||| ||||| || || || || Sbjct 38472619 AATGCAGATTTTTGTGAAAACTTTGACTGGAAAAACTATCACATTGGAGGTGGAGAGCTC 38472678 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||||| || || |||||||| || || || || || || || Sbjct 38472679 AGACACAATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACCA 38472738 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||||| ||| || ||||||||||| ||| || || | | ||||||| Sbjct 38472739 GCAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGAGGACCCTTGCGGATTATA- 38472797 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 | ||||||| || |||| || ||||| || || Sbjct 38472798 -ACATCCAAAAGGAATCGACCCTGCATTTGGTTTT 38472831 Score = 105 bits (116), Expect = 1e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | || |||||||||||||| || || || || |||| Sbjct 38472164 ATGCAGATTTTTGTAAAAACCCTCACCGGAAAAACTATTACGTTGGAGGTGGAGAGTTCT 38472223 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || || ||||| ||||| || || | || || Sbjct 38472224 GATACGATTGATAATGTTAAGGCCAAGATTCAGGATAAGGAAGGGATCCCACTGGACCAG 38472283 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| ||| || |||||||| |||||| | ||||| | | || ||||| Sbjct 38472284 CAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACTCTTGCGGACTATAAC 38472343 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTA 156035 || || || |||| || ||||| |||||| Sbjct 38472344 ATTCAGAAGGAATCGACCCTCCATTTGGTGTTA 38472376 Score = 96.9 bits (106), Expect = 5e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | ||||| ||||| || || | || || ||| || Sbjct 38459540 ATGCAGATCTTTGTGAAAACCCTTACTGGTAAAACCATCACCCTTGAGGTGGAAAGCTCC 38459599 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || || ||||| ||||| ||||||||||| |||||||| ||| Sbjct 38459600 GATACTATTGATAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCAA 38459659 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | |||| |||||| || || ||||| ||| | ||||| | | || || | Sbjct 38459660 CAGAGGCTTATTTTTGCCGGAAAACAACTCGAGGATGGCCGAACTCTTGCCGACTACA-- 38459717 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGT 156031 | ||||||| ||| | || || || |||| Sbjct 38459718 ACATCCAAAAGGAGTCCACCCTCCACCTAGT 38459748 Score = 93.3 bits (102), Expect = 6e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | ||||| | || |||||||| || || || || || || |||| Sbjct 38459996 ATGCAGATATTTGTAAAAACCCTCACCGGAAAAACCATCACTTTGGAGGTGGAGAGTTCT 38460055 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || || || || || || || || ||||| || Sbjct 38460056 GATACCATTGATAATGTTAAGGCGAAGATTCAGGACAAGGAGGGTATTCCACCAGATCAG 38460115 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| |||||| ||||||||||| ||| || || | | ||||||| Sbjct 38460116 CAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACGCTTGCGGATTATA-- 38460173 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032 | ||||||| ||| | || || || || ||| Sbjct 38460174 ACATCCAAAAGGAGTCAACCCTGCACTTGGTG 38460205 Score = 93.3 bits (102), Expect = 6e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| ||||| | || || ||||| || ||||| || || | || ||||| || Sbjct 38472848 ATGCAGATATTCGTGAAGACCTTGACCGGTAAAACCATCACCCTGGAGGTCGAGAGCTCG 38472907 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || |||||| ||||| || || || || || || |||||||| || Sbjct 38472908 GACACCATTGACAATGTGAAAGCGAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCAG 38472967 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| ||| || ||||||||||| ||| || || | | ||||||| Sbjct 38472968 CAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGAGGACCCTTGCGGATTATA-- 38473025 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 | ||||||| || |||| || ||||| || || Sbjct 38473026 ACATCCAAAAGGAATCGACCCTGCATTTGGTTTT 38473059 >seq7 Length=127721098 Score = 120 bits (132), Expect = 4e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| | |||||||| || ||||| || || || || ||| Sbjct 86220160 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACAATTACCTTGGAGGTGGAGAGTTCG 86220219 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || |||||| || || || || |||||||| || || ||||| ||| Sbjct 86220220 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAAGAAGGAATCCCACCAGACCAA 86220279 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||| || || || || |||||| || ||| | | ||||||||| Sbjct 86220280 CAAAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGGACTCTTGCCGATTATAAT 86220339 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || ||| | || || ||||| || Sbjct 86220340 ATCCAGAAGGAGTCTACTCTCCATTTGGT 86220368 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||| | ||| | || || | || ||||| |||||||| || ||||| || |||| Sbjct 44509726 ATGCAAGTTTTTGTGAAGACCCTCACAGGAAAGACTATTACCTTGGAAGTTGAGAGTTCT 44509667 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || |||||| ||| || || || || ||||| || || || || ||| Sbjct 44509666 GATACGATTGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGTATTCCACCGGATCAA 44509607 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||||| ||| || |||||||| || ||| || || | | ||||||||| Sbjct 44509606 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAGGATGGGAGGACCCTTGCTGATTATAAT 44509547 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || |||||| | || || || || ||| Sbjct 44509546 ATTCAGAAAGAGTCAACCCTCCACTTGGTG 44509517 Score = 102 bits (112), Expect = 1e-16 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | ||||||||||| || || ||||| || || |||| Sbjct 44509954 ATGCAGATCTTTGTAAAAACGCTCACTGGAAAAACCATCACTTTAGAGGTGGAGAGTTCT 44509895 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||| || || || || || || || ||||| || ||||| || Sbjct 44509894 GATACAATTGATAACGTTAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCAGACCAG 44509835 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || || |||| ||| || || || || |||||| |||||| | |||| ||||| Sbjct 44509834 CAGAGGTTAATTTTTGCTGGGAAACAACTTGAAGATGGCAGAACCCTTGCAGACTATAAC 44509775 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034 || || ||| || | || || ||||| ||||| Sbjct 44509774 AT-TCAAAAGGAATCTACCCTCCATTTGGTGTT 44509743 Score = 100 bits (110), Expect = 4e-16 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| |||| || | || ||||| || ||||| || || || || ||| Sbjct 44543037 ATGCAAATATTTGTTAAGACTCTTACCGGAAAGACCATTACTTTGGAGGTTGAGAGTTCA 44542978 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || ||| || || || ||||| || || || ||||| ||| Sbjct 44542977 GATACCATTGACAATGTCAAGGCTAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAA 44542918 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | |||||||||||| || |||||| | | ||| | | ||||| | Sbjct 44542917 CAGAGGTTGATCTTTGCCGGTAAGCAACTTGAAGATGGCCGCACTCTCGCTGATTACA-- 44542860 Query 156003 ATATCCAAA 156011 | ||||||| Sbjct 44542859 ACATCCAAA 44542851 Score = 95.1 bits (104), Expect = 2e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| |||||| | ||||| ||||| || ||||| ||||| || || || || || Sbjct 44509499 AATGCAGATATTTGTGAAAACTTTGACCGGTAAAACCATTACGTTGGAGGTGGAGAGCTC 44509440 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || || || || || || |||||||| || || || || || || || Sbjct 44509439 CGACACGGTTGATAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACCA 44509380 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| || ||||||| |||||| ||||||||||| || || || | | || ||||| Sbjct 44509379 ACAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAGGACGGGAGGACCCTTGCGGACTATAA 44509320 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034 || || ||| ||| |||| || ||||| || || Sbjct 44509319 CAT-TCAAAAGGAGTCGACCCTGCATTTGGTTTT 44509287 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | |||||||| ||||| || |||| || ||| ||| Sbjct 86220616 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACTATCACTCTAGAGGTTGAAAGTTCA 86220675 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || || ||||| || ||||| || || ||||| || Sbjct 86220676 GACACCATTGACAATGTTAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAG 86220735 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | || | ||| || ||||| || |||||| ||| || || | ||||||| Sbjct 86220736 CAAAGGCTCATATTTGCTGGCAAGCAACTTGAAGATGGCAGGACATTGGCTGATTATA-- 86220793 Query 156003 ATATCCAAA--GAGGCGACGCTTCAT 156026 ||||||||| ||| | || || ||| Sbjct 86220794 ATATCCAAAAGGAGTCTACTCTGCAT 86220819 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || ||||| || || || || || || ||| ||| Sbjct 86220388 ATGCAGATCTTTGTAAAGACTCTTACCGGAAAGACCATCACTTTGGAGGTTGAAAGTTCC 86220447 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| || || ||||| || || || || || ||||| || Sbjct 86220448 GATACCATTGACAATGTGAAGGCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCAG 86220507 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | || | ||| || ||||||||||||||| || || || | || || | Sbjct 86220508 CAAAGGCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGTAGGACATTGGCCGACTACA-- 86220565 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 ||||||||| ||| | || ||||| || ||||| Sbjct 86220566 ATATCCAAAAGGAGTCTACCCTTCACTTGGTGTT 86220599 >seq1 Length=147124936 Score = 107 bits (118), Expect = 3e-18 Identities = 410/638 (64%), Gaps = 20/638 (3%) Strand=Plus/Plus Query 17870 TATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATA 17929 || ||||| ||| | |||||||||||||| || || |||| |||||| |||| | ||| Sbjct 98686990 TACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGTTCCATC 98687049 Query 17930 AAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTATAATAATCTA 17989 ||||||| || |||| | || || ||| | | ||| | ||| || | | Sbjct 98687050 CAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAACAACCGA 98687109 Query 17990 TCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAA 18049 || || || || || | ||||| |||||| || | |||||| || | || | || Sbjct 98687110 TCCGCAACGAACTCAATGTATTGACTCATCAACTCACCATTCATCCCAACTAACGCGCAA 98687169 Query 18050 GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTATT 18109 || ||||| || | ||| || ||||||| | || | || | | ||| | Sbjct 98687170 GGAAGAGCGTCGCATACAAACTCCCTCTCTATATACACCGCATCACTCACTATTCCCTTC 98687229 Query 18110 ACCCTAGATTTTGGCAATT---TATTAATTATGTGATTATAATATAATAAACACGCAAAA 18166 || | | | || || || | | | | | | || | | || | || || ||||| Sbjct 98687230 ACGC--GCTCTT--CACTTAGCTTTGACTGAAG-GAG-AGAGTACAGCAAGCAAGCAAAG 98687283 Query 18167 TCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATT 18226 || || | ||||||||||| || || || ||||| || ||||| || |||||| Sbjct 98687284 TCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCAGGCATT 98687343 Query 18227 ATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCA 18286 | || | ||||||| ||||||||||| |||||| | || || ||||| || || Sbjct 98687344 AACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCGGAGAAAAATATGCCTTCT 98687403 Query 18287 ACGCACGCGAACGCTATTAATCTTTCAGCAAAA-CTGTATTTATTG-CTCAGT--ATCCA 18342 ||||| ||||| || ||||| | ||| |||||| || | | | | || ||||| Sbjct 98687404 ACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCT-------TCGCCGCCGTCGATCCA 98687456 Query 18343 TTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAA 18402 ||| ||||| || ||| | ||||| | | || |||| | || | Sbjct 98687457 TTTGAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGGAAGAG 98687516 Query 18403 ATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGA 18462 | |||||| ||| |||||| |||||||| |||| | | | |||||| ||||| Sbjct 98687517 GCGGTTTTTTTCGGTGGCATCTTTGATATAAGTTTCGAGGAGGAGACTATACATCTCAGA 98687576 Query 18463 ATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACG 18500 || || | || || || || || || | |||||||| Sbjct 98687577 GTGGATATTCTCGATGGCGATTTGGAATCCATAAAACG 98687614 >seq12 Length=146008498 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| ||||||||||| ||||| || ||||| || || ||| ||| Sbjct 24219444 ATGCAGATTTTCGTTAAGACATTGACTGGGAAAACAATCACATTGGAGGTGGAAAGTTCG 24219503 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| || || || || || ||||| || |||||||| || Sbjct 24219504 GATACAATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAAGGTATCCCTCCAGATCAG 24219563 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | || | ||| || ||||| | || ||| || |||||| | |||||||| Sbjct 24219564 CAAAGGCTCATCTTTGCTGGAAAGCAATTGGAGGATGGGAGGACTTTAGCTGATTATAAC 24219623 Query 156003 ATATCCAAAGAGGCGACGCTTCA 156025 || |||||| | || ||||| Sbjct 24219624 ATTCAGAAAGAGTCCACCCTTCA 24219646 Score = 93.3 bits (102), Expect = 6e-14 Identities = 98/127 (77%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 155913 CAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTC 155972 || |||||||||||||| ||||| || || || || ||||||| ||| |||||||| || Sbjct 139210910 CAGGATAAAGAAGGCATCCCTCCTGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAACTG 139210851 Query 155973 GAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGGCGACGCTTCATTTAG 156030 |||||| | |||| || | ||||||| | ||||||| ||| | || ||||| ||| Sbjct 139210850 GAAGATGGCCGAACCCTAGCTGATTATA--ACATCCAAAAGGAGTCCACTCTTCACCTAG 139210793 Query 156031 TGTTAAG 156037 | ||||| Sbjct 139210792 TTTTAAG 139210786 >seq2 Length=101023042 Score = 96.9 bits (106), Expect = 5e-15 Identities = 151/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 155824 TGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTG 155883 |||| ||||| | || || |||| ||||| || || ||||| || | ||| ||| | Sbjct 44354003 TGCAGGTATTTGTGAATACTCTGACAGGAAAGACAATCACATTGGAGTTTGAAAGTTCAG 44354062 Query 155884 ATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAAC 155943 | | | | |||||||| || || ||||| || ||||| || ||||| || || | Sbjct 44354063 ACACCACTGACAACGTGAAGGTGAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCAGC 44354122 Query 155944 AAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATA 156003 |||| | || | ||| ||||||||||| ||| || || || || | || |||| | Sbjct 44354123 AAAGGCTAATCT-TGCTGGTAAGCAGCTTGAAAATGGGAGGACGTTGACCGACTATA--A 44354179 Query 156004 TATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 |||||||| |||||||| ||||| || ||||| Sbjct 44354180 TATCCAAAAGGAGGCGACCCTTCACTTGGTGTT 44354212 Score = 93.3 bits (102), Expect = 6e-14 Identities = 151/219 (69%), Gaps = 10/219 (5%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | ||||||||||| |||||||| ||||| || ||| Sbjct 44353769 ATGCAAATATTTGTCAAGACCCTCACTGGAAAAACAATTACATTGGAAGTTGAGAGTTCA 44353828 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACC---------- 155932 ||| |||| | |||||| | ||||| || || ||||| || || || Sbjct 44353829 AATACTATTGATATTGTGAAAGACAAAATTCAGGAAAAAGAGGGTATCCCCCCCCCCCGG 44353888 Query 155933 TCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATC 155992 ||| | || ||||||| |||| ||| || | || || || ||| || ||| | | Sbjct 44353889 CCCAAACCAGTAAAGATTAATTTTTGCAGGAGAACAACTTGAGGATGGAAGGACTCTTGC 44353948 Query 155993 AGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGT 156031 ||||||||||| |||||| | || |||||||| || Sbjct 44353949 TGATTATAATATTCAAAAAGAGTCAACTCTTCATTTGGT 44353987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731182036820400