Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 125 7e-24 seq4 123 2e-23 seq10 120 3e-22 seq7 118 1e-21 seq13 114 1e-20 seq12 95.1 1e-14 >seq6 Length=121339338 Score = 127 bits (140), Expect = 2e-24 Identities = 163/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||| ||||| || ||| |||||||| ||||| ||||||| | |||||| Sbjct 51785672 AGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGG 51785731 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| ||||| || || |||||||||||||| | || | || ||| Sbjct 51785732 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCTTCC 51785791 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||| | || | || |||| || | | | |||||| ||||| ||||| | || Sbjct 51785792 TTGT-CTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGT 51785850 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| || || ||||| || || || ||||| || ||||| || Sbjct 51785851 TATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 51785892 >seq1 Length=147124936 Score = 125 bits (138), Expect = 7e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || | ||||| | || || || || ||| |||||||| ||||| ||||||| Sbjct 22444419 CGCCACCCCTGAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGG 22444478 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | |||||| |||| ||||||||||| |||||||| || |||||||||||||| | | Sbjct 22444479 CTAAGGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATAAGGCGCTGTTGGTCGGGTG 22444538 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || |||||||| | || | || || | ||| | | | || ||| || || Sbjct 22444539 GGATGCCCTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATTGTATCGGAGGATTCA 22444597 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | ||||| || || ||||| || || || ||||| |||||||| || Sbjct 22444598 ACCTCTAAGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCATCTT 22444650 >seq4 Length=137675496 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || || || || ||| |||||||| ||||| ||||||| | |||||| Sbjct 135762770 AGACGGAGGACAAGGTGTAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGG 135762829 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || ||||| |||||||||||||| || || || |||||||| | |||| || ||| Sbjct 135762830 CCATCTTCGAGTTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCAGGTGGAATGCCTTCC 135762889 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||| | || | || |||| || | | | ||||| ||||| ||||| | || Sbjct 135762890 TTGT-CTTGGATCTTAGCTTTGACATTGTCAATGGTGTCCGAAGACTCGACCTCTAGGGT 135762948 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATGG 41873 ||| || || |||||||| || || ||||| |||||||| || |||||| Sbjct 135762949 TATAGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCATCTTGGCGATGG 135762998 >seq10 Length=114683840 Score = 120 bits (132), Expect = 3e-22 Identities = 162/222 (73%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || || |||| |||||| ||| ||||| || ||||||||||| | || || | | Sbjct 38460669 AGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCCGCAAGCGTCCTC 38460610 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| ||||| || |||| | ||| ||||| | |||| | |||| Sbjct 38460609 CCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATTCCCTCC 38460550 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 |||||| ||| | || |||| ||| | | | ||||| ||| ||| ||||||| Sbjct 38460549 TTGTCC-TGAATCTTCGCTTTAACATTGTCAATGGTGTCCGAGCT---CTCGACCTCCAG 38460494 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 38460493 TGTTACGGTTTTACCAGTCAGGGTCTTAACGAATATCTGCAT 38460452 Score = 113 bits (124), Expect = 4e-20 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||||||||||| ||| || || |||||||||||||||||||| | Sbjct 38472391 GCCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGC 38472332 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || || || | || || |||||||| || || || |||| | ||| |||||| | || Sbjct 38472331 AAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCAGTGG 38472272 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 || | || ||||| ||| ||| | || || | ||| | | || || |||| Sbjct 38472271 GATCCCT-TCCTTATCC-TGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCC 38472214 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||| || ||||| || || || || ||||| ||||||||||| Sbjct 38472213 ACCTCCAACGTAATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCAT 38472164 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || |||| |||||| || ||||| || |||||||| || | Sbjct 38473074 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38473015 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | | || ||||||||||| || || || |||| | ||| ||||| | ||| Sbjct 38473014 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 38472955 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||||||| ||| |||| |||| || | | | ||||| ||| ||| Sbjct 38472954 ATCCCCTCCTTGTCC-TGAATTTTCGCTTTCACATTGTCAATGGTGTCCGAGCT---CTC 38472899 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || |||||||| |||| ||||| ||||| |||||||| Sbjct 38472898 GACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 38472848 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || |||||||| ||| ||||||||| || || ||||| | Sbjct 38473302 CCACCACGGAGGCGAAGGACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCAGCT 38473243 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || | |||||| || || ||||||| | ||| ||||| | ||| Sbjct 38473242 AGAGTTCGACCATCCTCTAACTGCTTACCAGCAAATATCAACCTCTGCTGGTCTGGTGGA 38473183 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||||||| ||| |||| |||| || | | | ||||| |||| || Sbjct 38473182 ATCCCCTCCTTGTCC-TGAATTTTCGCTTTCACATTGTCGATCGTGTCTGAGCTC---TC 38473127 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || ||||| || |||| ||||| ||||| |||||||| Sbjct 38473126 CACCTCCAGGGTGATTGTTTTCCCGGTCAAGGTCTTCACGAATATCTGCAT 38473076 Score = 104 bits (114), Expect = 2e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || |||||||||| ||| || || ||||||||||||||||| || | Sbjct 38466679 GCCACCACGGAGTCGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAATCAGC 38466620 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || || || | || || |||||||| || || || |||| | ||| |||||| | || Sbjct 38466619 AAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGG 38466560 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 || | || ||||| ||| ||| | || || | ||| | | || || |||| Sbjct 38466559 GATCCCT-TCCTTATCC-TGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCC 38466502 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||| || ||||| || || || || ||||| ||||||||||| Sbjct 38466501 ACCTCCAACGTAATAGTTTTTCCAGTGAGGGTTTTTACAAAAATCTGCAT 38466452 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || |||||||| ||| ||||||||||| || ||||| | Sbjct 38460906 CCACCACGGAGGCGAAGGACAAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCTGCT 38460847 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || | |||||| || || || |||| | ||| ||||||| ||| Sbjct 38460846 AAAGTTCGACCATCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGA 38460787 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||||||| ||| | || | || || | | | ||||| ||| ||| Sbjct 38460786 ATCCCCTCCTTGTCC-TGAATCTTAGATTTCACATTGTCAATCGTGTCCGAGCT---CTC 38460731 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || ||||| || |||| ||||| ||||| |||||||| Sbjct 38460730 CACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTCACGAATATCTGCAT 38460680 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| ||||| || |||||| || |||||||| || | Sbjct 38460222 CCACCACGCAGTCGCAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCA 38460163 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | | || ||||||||||| ||||| || |||| | ||| || || | ||| Sbjct 38460162 AGCGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGTGGA 38460103 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || || | ||| | | || || |||||| Sbjct 38460102 ATACCCTCCTTGTCC-TGAATCTTCGCCTTAACATTATCAATGGTATCAGAACTCTCCAC 38460044 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| || || || || ||||| || |||||||| Sbjct 38460043 CTCCAAAGTGATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 38459996 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || |||| |||||| || ||||| || |||||||| || | Sbjct 38467134 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38467075 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | | || ||||||||||| || || || |||| | ||| ||||| | || Sbjct 38467074 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 38467015 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTC 41811 | | |||||| || ||| || ||||| | | | | ||||| ||| ||| Sbjct 38467014 ATACCCTCCTTATCTTGGATCTTGGCCTTCACATTATCA-ATTGTGTCTGAGCT---CTC 38466959 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || ||||| || |||| || || || ||||||||||| Sbjct 38466958 CACCTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCAT 38466908 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || |||| |||||| || ||||| || |||||||| || | Sbjct 38472846 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 38472787 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | | || ||||||||||| || || || |||| | ||| ||||| | || Sbjct 38472786 AGGGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 38472727 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTC 41811 | | |||||| || ||| || ||||| | | | | ||||| ||| ||| Sbjct 38472726 ATACCCTCCTTATCTTGGATCTTGGCCTTCACATTATCA-ATTGTGTCTGAGCT---CTC 38472671 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || ||||| || |||| || || || ||||||||||| Sbjct 38472670 CACCTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCAT 38472620 >seq7 Length=127721098 Score = 118 bits (130), Expect = 1e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || || |||| |||||| || |||||| |||||||||||||| | ||||| | | Sbjct 44509281 AGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCAAGGGTCCTC 44509340 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| ||||| || |||| | ||||||||| | || | | |||| Sbjct 44509341 CCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCC 44509400 Query 41765 TTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 || || ||| || ||| | | | | || |||||| ||||||||||| ||| Sbjct 44509401 TTATCTTGGATCTTGGCCTTAACATTATCA-ACCGTGTCGGAGCTCTCCACCTCCAACGT 44509459 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||||||| |||| || || || || |||||||| Sbjct 44509460 AATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCAT 44509498 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| ||| || || ||||| |||||||||||||| | Sbjct 44509728 CCACCACGAAGACGCAACACCAAATGGAGGGTAGATTCCTTTTGAATGTTATAGTCTGCA 44509787 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || || || || || || || || | | ||| ||||| | || Sbjct 44509788 AGGGTTCTGCCATCTTCAAGTTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGG 44509847 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA--CTCCA 41813 | || |||||||||| ||| | || | | |||| || | ||| | | ||||| Sbjct 44509848 ATGCCCTCCTTGTCC-TGAATCTTGGACTTAACGTTATCA-ATTGTATCAGAACTCTCCA 44509905 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || ||||| || || ||||| ||||| || ||||||||| Sbjct 44509906 CCTCTAAAGTGATGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCATG 44509955 >seq13 Length=144148110 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| ||||||||| ||||||||||| | Sbjct 116705479 CCACCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCC 116705420 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || || ||||| || || || ||||| | ||||||||| | |||| Sbjct 116705419 AGGGTACGGCCATCCTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGGTCTGGGGGA 116705360 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA--CTCCA 41813 | | |||||||||| ||| ||||||| | ||| | | | || || | ||| | Sbjct 116705359 ATTCCCTCCTTGTCC-TGAATTTTTGCCTTAAC-ATTATCAATGGTATCTGAACTCTCTA 116705302 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || |||| ||||| || ||||| ||||| Sbjct 116705301 CCTCCAATGTAATGGTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCAT 116705253 >seq12 Length=146008498 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || || || || ||| |||||||| || ||||| |||| Sbjct 24219215 GCCCCCGCGAAGACGGAGGACGAGGTGGAGGGTGGATTCCTTCTGGATATTATAATCGGC 24219156 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || | || |||||||| ||||||||||| || || ||||| ||||| | || Sbjct 24219155 CAAGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGG 24219096 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||| |||||| ||| || | || | |||||| ||| Sbjct 24219095 GATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCG--ATGGTGTCGGAGCTCTCG 24219038 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | || || || ||||| || | || || ||||| |||||||| Sbjct 24219037 ACTTCGAGGGTGATGGTCTTACCGGTTAAGGTTTTGACGAAGATCTGCAT 24218988 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| |||||||||||||| || |||| Sbjct 24218530 CCCCCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAATCGGCC 24218471 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || |||| |||||||| ||||||||||| || || ||||| ||||| | || Sbjct 24218470 AAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 24218411 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || ||||||| | ||| |||| | ||| || || | ||||| ||| Sbjct 24218410 ATGCCTTCCTTGT-CTTGAATTTTAGACTTTACATTATCG--ATGGTGTCAGAACTCTCA 24218354 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || || || || || || || || || ||||| |||||||| || Sbjct 24218353 ACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAGATCTGCATCTT 24218301 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| |||||||| ||||| || |||| Sbjct 24218986 CCCCCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 24218927 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || |||| |||||||| ||||||||||| || || ||||| ||||| | || Sbjct 24218926 AAGGTACGGCCGTCTTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 24218867 Query 41756 ACGCTCTCCTTGTCCATGATTTTT 41779 | || ||||||| | ||| |||| Sbjct 24218866 ATGCCTTCCTTGT-CTTGAATTTT 24218844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461868168682800