Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq16075 116 5e-21
seq25104 113 7e-20
seq29489 104 3e-17
seq2911 100 4e-16
seq12924 98.7 1e-15
seq10219 98.7 1e-15
seq9953 95.1 2e-14
seq481 93.3 6e-14
seq8609 87.8 3e-12
seq2343 87.8 3e-12
seq14353 84.2 3e-11
seq14049 84.2 3e-11
>seq16075
Length=278268
Score = 116 bits (128), Expect = 5e-21
Identities = 108/137 (79%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | | |||||||| | |||||| || || ||||||||||| | |
Sbjct 276212 CCACCCCGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCA 276271
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | ||| || | ||||||||||||||||||||||||||| || || || ||
Sbjct 276272 AGAGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGG 276331
Query 146171 ATTCCTTCTTTATCTTG 146187
||||||||||| || ||
Sbjct 276332 ATTCCTTCTTTGTCCTG 276348
>seq25104
Length=148940
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | | |||||||| | |||||| || || ||||||||||| | |
Sbjct 36302 CCACCACGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCA 36243
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| || | ||| || | ||||||||||||||||||||||||||| || || || ||
Sbjct 36242 AGAGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGG 36183
Query 146171 ATTCCTTCTTTATCTTG 146187
||||||||||| || ||
Sbjct 36182 ATTCCTTCTTTGTCCTG 36166
>seq29489
Length=97735
Score = 104 bits (114), Expect = 3e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| |||||||| ||||| || | || | ||| || || || || ||||||||
Sbjct 37316 GTTCCTCCTCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 37375
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| || |||| || ||| |||| ||| || |||||||||||||| || |||||||| |||
Sbjct 37376 GCTAGGGTTCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 37435
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || || |||||||| ||
Sbjct 37436 GGGATGCCCTCTTTATCCTG 37455
Score = 104 bits (114), Expect = 3e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| || ||||| ||||| || | || | ||| || || || || ||||||||
Sbjct 42578 GTTCCTCCCCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 42637
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| || |||| || ||| |||| ||| || |||||||||||||| || |||||||| |||
Sbjct 42638 GCTAGGGTTCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 42697
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || ||||||||||| ||
Sbjct 42698 GGGATGCCTTCTTTATCCTG 42717
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| |||||||| ||||| || | || | ||| || || || || ||||||||
Sbjct 31828 GTTCCTCCTCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 31887
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| || |||| || ||| || | ||| || |||||||||||||| || |||||||| |||
Sbjct 31888 GCTAGGGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 31947
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || || |||||||| ||
Sbjct 31948 GGGATGCCCTCTTTATCCTG 31967
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| || ||||| ||||| || | || | ||| || || || || ||||||||
Sbjct 46195 GTTCCTCCCCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 46254
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| || |||| || ||| || | ||| || |||||||||||||| || |||||||| |||
Sbjct 46255 GCTAGGGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 46314
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || ||||||||||| ||
Sbjct 46315 GGGATGCCTTCTTTATCCTG 46334
>seq2911
Length=225525
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| |||||||| ||||| || | || | ||| || || || || ||||||||
Sbjct 22908 GTTCCTCCTCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 22967
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| || |||| || ||| || | ||| || |||||||||||||| || |||||||| |||
Sbjct 22968 GCTAGGGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 23027
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || || |||||||| ||
Sbjct 23028 GGGATGCCCTCTTTATCCTG 23047
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| |||||||| ||||| || | || | ||| || || || || ||||||||
Sbjct 29022 GTTCCTCCTCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 29081
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| || |||| || ||| || | ||| || |||||||||||||| || |||||||| |||
Sbjct 29082 GCTAGGGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 29141
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || || |||||||| ||
Sbjct 29142 GGGATGCCCTCTTTATCCTG 29161
>seq12924
Length=310248
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | |||| | ||||| || | ||||| ||||| |||||||||||||
Sbjct 74081 TTCCACCACGCAGTCGGAGCACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCTG 74022
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||| || || | ||| || | ||||| |||||||||||||| || |||||||| || |
Sbjct 74021 CAAGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTG 73962
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||| ||||| || || ||
Sbjct 73961 GAATCCCTTCCTTGTCCTG 73943
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | || | ||| |||||||| | || ||||| || || ||||| || | |
Sbjct 73851 CCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCA 73792
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||||| || ||| || | || ||||||||||||||||| || ||||| ||||| ||
Sbjct 73791 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGG 73732
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| ||||| ||
Sbjct 73731 ATCCCTTCCTTATCCTG 73715
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||||||||| || |||||||| | || ||||| || || |||||||| | |
Sbjct 74307 CCCCCTCTAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 74248
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||||||||||||||| || ||||| || || ||
Sbjct 74247 AGTGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 74188
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || ||||||||
Sbjct 74187 ATACCCTCCTTATCTTG 74171
Score = 89.7 bits (98), Expect = 8e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||||||| | || |||||||| | || ||||| || || ||||| || |
Sbjct 60722 TTCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCCG 60663
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||
Sbjct 60662 CAAGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAG 60603
Query 146169 GAATTCCTTCTTTATCTTG 146187
||||||| || || || ||
Sbjct 60602 GAATTCCCTCCTTGTCCTG 60584
>seq10219
Length=308859
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| | ||||| || | ||||| ||||| ||||||||||||| |
Sbjct 29838 CCTCCTCGAAGTCGGAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATCTGCA 29779
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | ||||| |||||||||||||| || |||||||| || |||
Sbjct 29778 AGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 29719
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || || ||
Sbjct 29718 ATCCCTTCCTTGTCCTG 29702
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | || | ||| |||||||| | || ||||| || || ||||| || | |
Sbjct 29610 CCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCA 29551
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||||| || ||| || | || ||||||||||||||||| || ||||| ||||| ||
Sbjct 29550 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGG 29491
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| ||||| ||
Sbjct 29490 ATCCCTTCCTTATCCTG 29474
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 30066 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 30007
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 30006 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 29947
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 29946 ATCCCCTCCTTGTCCTG 29930
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 30294 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 30235
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 30234 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 30175
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 30174 ATCCCCTCCTTGTCCTG 30158
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 30522 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 30463
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 30462 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 30403
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 30402 ATCCCCTCCTTGTCCTG 30386
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 30750 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 30691
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 30690 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 30631
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 30630 ATCCCCTCCTTGTCCTG 30614
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 30978 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 30919
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 30918 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 30859
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 30858 ATCCCCTCCTTGTCCTG 30842
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 31206 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 31147
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 31146 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 31087
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 31086 ATCCCCTCCTTGTCCTG 31070
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 31434 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 31375
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 31374 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 31315
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 31314 ATCCCCTCCTTGTCCTG 31298
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 31662 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 31603
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 31602 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 31543
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 31542 ATCCCCTCCTTGTCCTG 31526
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 31890 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 31831
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 31830 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 31771
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 31770 ATCCCCTCCTTGTCCTG 31754
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 32118 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 32059
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 32058 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 31999
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 31998 ATCCCCTCCTTGTCCTG 31982
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 32346 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 32287
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 32286 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 32227
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 32226 ATCCCCTCCTTGTCCTG 32210
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 32574 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 32515
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 32514 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 32455
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 32454 ATCCCCTCCTTGTCCTG 32438
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| ||| |||||||| | || ||||| || || ||||| |||| |
Sbjct 32802 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 32743
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||||
Sbjct 32742 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 32683
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 32682 ATCCCCTCCTTGTCCTG 32666
Score = 84.2 bits (92), Expect = 3e-11
Identities = 103/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|| |||||||| | || |||||||| | || ||||| ||| || || ||||| || |
Sbjct 23463 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGA-ATGTTATAGTCCGC 23405
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
||| || || | ||| || | || ||||| ||||||||||| || ||||| || |||||
Sbjct 23404 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 23345
Query 146170 AATTCCTTCTTTATCTTG 146187
||| || || || || ||
Sbjct 23344 AATCCCCTCCTTGTCCTG 23327
>seq9953
Length=604776
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | || || | || | ||| ||||| || ||||| ||||| |
Sbjct 354626 CCACCCCGAAGACGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCC 354685
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| || | ||| || |||||||| ||||| |||||||| ||||||||||| || |||
Sbjct 354686 AAAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGA 354745
Query 146171 ATTCCTTCTTTATCTTG 146187
||||||||||| || ||
Sbjct 354746 ATTCCTTCTTTGTCCTG 354762
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | || || | || | ||| ||||| || ||||| ||||| |
Sbjct 353500 CCACCCCGAAGACGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCC 353559
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| || | ||| || |||||||| ||||| |||||||| ||||||||||| || |||
Sbjct 353560 AAAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGA 353619
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| || ||
Sbjct 353620 ATCCCTTCTTTGTCCTG 353636
>seq481
Length=542854
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | ||| | || |||||||| | |||||||| ||| || || ||||| ||||
Sbjct 258388 CCACCACGAAGACGCAACACCAAATGGAGGGTAGATTCCTTTTGA-ATGTTATAGTCTGC 258330
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
||| ||||||| ||| || | |||||| ||||||||||| || || ||||| || || ||
Sbjct 258329 AAGGGTTCTGCCATCTTCAAGTTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGG 258270
Query 146170 AATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 258269 GATGCCCTCCTTGTCCTG 258252
>seq8609
Length=114046
Score = 87.8 bits (96), Expect = 3e-12
Identities = 80/100 (80%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 146088 CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAA 146147
|||| || ||||| ||||| | | ||| || | ||| || | ||||| ||||||||||
Sbjct 21349 CTTTTGA-ATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGTTTCCCAGCAAAAA 21291
Query 146148 TCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||| ||||||||||| || |||||||||||||| || ||
Sbjct 21290 TCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTG 21251
Score = 87.8 bits (96), Expect = 3e-12
Identities = 80/100 (80%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 146088 CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAA 146147
|||| || ||||| ||||| | | ||| || | ||| || | ||||| ||||||||||
Sbjct 32444 CTTTTGA-ATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGTTTCCCAGCAAAAA 32386
Query 146148 TCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||| ||||||||||| || |||||||||||||| || ||
Sbjct 32385 TCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTG 32346
>seq2343
Length=47720
Score = 87.8 bits (96), Expect = 3e-12
Identities = 80/100 (80%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 146088 CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAA 146147
|||| || ||||| ||||| | | ||| || | || || | |||||| ||||||||||
Sbjct 23772 CTTTTGA-ATATTGTAATCAGCCAAAGTCCTTCCGTCTTCCAGTTGTTTCCCAGCAAAAA 23714
Query 146148 TCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||| ||||||||||| || |||||||||||||| || ||
Sbjct 23713 TCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTG 23674
>seq14353
Length=57137
Score = 84.2 bits (92), Expect = 3e-11
Identities = 103/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | ||| | || |||||||| | ||||| || ||| || || ||||| ||||
Sbjct 55105 CCACCACGAAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGA-ATGTTATAGTCTGC 55047
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
||| ||||||| ||| || | ||||| ||||||||||| || || ||||| || || ||
Sbjct 55046 AAGGGTTCTGCCATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCAGGTGG 54987
Query 146170 AATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 54986 GATGCCCTCCTTGTCCTG 54969
>seq14049
Length=220174
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128
|||| || ||||| ||||| || || || ||||||| ||| || || | ||| |||
Sbjct 40164 ACCAGGTGCAAAGTGGATTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTCCCATCCTCT 40223
Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
| || ||||||||||| |||| || ||||| || ||||| || ||||| ||||||||
Sbjct 40224 AGCTGCTTTCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTATCTTG 40282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743249891825920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |