Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq23340 95.1 2e-14
seq12755 95.1 2e-14
>seq23340
Length=555426
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 94182 TGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTC 94241
||| ||||| |||| ||||||||| || |||||| | | |||||| | || ||
Sbjct 730 TGCAATAGATGCCAGATTGCACACAGCTGTTTCCATTGGACTTGTGTACTCAATTATCTC 671
Query 94242 AGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGAT 94301
||| |||||||||||||| || ||| |||| | ||||| |||||| |||||||||
Sbjct 670 AGTACACAAATTTGAAGATTTAATGGTGCCAAGATTTTGCTGGTTACTTTTTCTATTGCA 611
Query 94302 GGTATCCTTAAA 94313
|||||||| |||
Sbjct 610 GGTATCCTGAAA 599
>seq12755
Length=243795
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 94182 TGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTC 94241
||| ||||| |||| ||||||||| || |||||| | | |||||| | || ||
Sbjct 41109 TGCAATAGATGCCAGATTGCACACAGCTGTTTCCATTGGACTTGTGTACTCAATTATCTC 41050
Query 94242 AGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGAT 94301
||| |||||||||||||| || ||| |||| | ||||| |||||| |||||||||
Sbjct 41049 AGTACACAAATTTGAAGATTTAATGGTGCCAAGATTTTGCTGGTTACTTTTTCTATTGCA 40990
Query 94302 GGTATCCTTAAA 94313
|||||||| |||
Sbjct 40989 GGTATCCTGAAA 40978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989206785732205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |