Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq12924 104 2e-17 seq10219 104 2e-17 seq16075 102 6e-17 seq14353 98.7 8e-16 seq25104 96.9 3e-15 seq15267 96.9 3e-15 seq5610 95.1 9e-15 seq2874 95.1 9e-15 seq2343 95.1 9e-15 seq481 89.7 4e-13 seq8609 86.0 5e-12 seq9953 82.4 6e-11 >seq12924 Length=310248 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||||| | |||||| || | || ||| || || | ||| ||||| | Sbjct 74079 CCACCACGCAGTCGGAGCACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCTGCA 74020 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||| | | || || | |||||||| ||||||||||| | ||| ||||| | || Sbjct 74019 AGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 73960 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| |||| || || ||| ||||| | ||| || Sbjct 73959 ATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACT 73900 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| |||||||| ||||| ||||||||||||||||| Sbjct 73899 TCCAAAGTAATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 73853 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||||| | |||||| || | || ||||||||| | || ||||| | Sbjct 60264 CCACCACGCAGTCGCAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCA 60205 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | || || | ||| || || ||||||||||| | ||| || || | || Sbjct 60204 AGAGTCCTCCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 60145 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | ||| || || || |||| || || | ||| |||||| ||| ||| || Sbjct 60144 ATACCCTCCTTGTCTTGGATCTTGGTCTTCACGTTATCAATTGTGTCTG-AGCTCTCCAC 60086 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || ||||||||||| || | ||||||||||||||| |||||| Sbjct 60085 CTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 60037 >seq10219 Length=308859 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| || |||| | |||||| |||| || ||| || || | ||| ||||| | Sbjct 29838 CCTCCTCGAAGTCGGAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATCTGCA 29779 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||| | | || || | |||||||| ||||||||||| | ||| ||||| | || Sbjct 29778 AGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 29719 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| |||| || || ||| ||||| | ||| || Sbjct 29718 ATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACT 29659 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| |||||||| ||||| ||||||||||||||||| Sbjct 29658 TCCAAAGTAATAGTCTTTCCGGTGAGAGTCTTCACAAAAATTTGCAT 29612 >seq16075 Length=278268 Score = 102 bits (112), Expect = 6e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||||||||| ||| |||||| || | ||| ||||||| | || | | | || || Sbjct 276230 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCATCTTCA 276289 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | |||||| || ||||||||||||| ||||| || | || | |||||||| || ||| Sbjct 276290 AGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTC-CTG 276348 Query 43021 -ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 ||| |||| || || ||| || || | |||||| || | || || || || Sbjct 276349 AATCTTGGCTTTCACATTGTCAATGGTATCCGAACTCTCGACCTCCAAGGTAATTGTCTT 276408 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||| || |||||||| ||||| |||||||| Sbjct 276409 TCCAGTGAGAGTTTTGACAAAGATTTGCAT 276438 >seq14353 Length=57137 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | | ||||||||||| ||| ||||||||| | |||||||| | | Sbjct 32151 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 32092 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || | ||| || |||||||| || | || ||| || || | || Sbjct 32091 AGGGTACGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGG 32032 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | |||||||| || |||| | ||||| | ||| ||||| | ||| || || Sbjct 32031 ATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTC-CGAGCTTTCCAC 31973 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| || ||||| || || || ||||| |||||||| Sbjct 31972 CTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 31925 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||||||| || ||||||||| | ||||| || | Sbjct 32835 CCACCACGAAGACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCA 32776 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||| | | || || | || || || || |||||||| | |||||| || | || Sbjct 32775 AGTGTCCTGCCATCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGG 32716 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | |||||| || || ||| | ||||| || ||| |||||| ||| ||| || Sbjct 32715 ATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGG-AGCTCTCAAC 32657 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || ||||| ||||| ||||| ||||||||||| ||||| Sbjct 32656 TTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 32609 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | ||||||||||| ||| |||||||| | ||||| || | | Sbjct 32379 CCACCACGAAGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCC 32320 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || || ||||| || || ||||| ||||| | ||| || || | ||| Sbjct 32319 AGGGTGCGACCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGA 32260 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| || || || |||| | ||||| || ||| || || | ||| || Sbjct 32259 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACC 32200 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || || |||||||| | || || ||||| ||||||||| Sbjct 32199 TCCAAAGTAATTGTCTTTCCGGTCAAGGTCTTAACAAAGATTTGCATT 32152 >seq25104 Length=148940 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||||||| ||| |||||| || | ||| ||||||| Sbjct 36302 CCACCACGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCA 36243 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || || | |||||| || ||||||||||||| ||||| || | || Sbjct 36242 AGAGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGG 36183 Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | |||||||| || ||| ||| |||| || | ||| || || | ||| ||| | Sbjct 36182 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTCACATTATCAATGGTATC-CGAGCTCTCCA 36125 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || || ||||| || |||||||| ||||| |||||||| Sbjct 36124 CCTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 36076 >seq15267 Length=425869 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 42900 CACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 ||| | ||||| ||| ||||| || | ||||| |||| || || || |||| || Sbjct 125038 CACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCCTC 124979 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 | || ||||||||||| || | |||||||| |||| || | ||||| || || Sbjct 124978 GAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTG 124919 Query 43020 GATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 |||| ||||||| || | | |||||| || ||| || |||| ||||| || || Sbjct 124918 GATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTCTT 124859 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || ||||| ||||| || || |||||||| || Sbjct 124858 CCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 124826 >seq5610 Length=141783 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || || || || | || | ||| |||||||| | ||| ||||| | | Sbjct 62431 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 62372 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||||||||| || || ||||| |||||||| || | || Sbjct 62371 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 62312 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| | || || || | | |||||| | |||||| Sbjct 62311 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 62252 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||||| ||||| ||||| |||||||| Sbjct 62251 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 62205 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | ||| || | |||| ||| || || || | || ||||||| Sbjct 62204 GCCCCCACGAAGGCGTAAGACGAGGTGGAGGGTGGATTCTTTCTGGATGTTATAATCGGC 62145 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | || || |||| || | |||||||| || ||||| | ||||| || |||| || Sbjct 62144 AAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCGGGTGG 62085 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CGA 43060 | ||||| || || |||| | ||||| || | | |||||| ||| | ||| Sbjct 62084 GATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGG-AGCTTTCGA 62026 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTT 43115 | || | ||||| || || ||||| || ||||||||||| || ||||| ||||| Sbjct 62025 CCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCATCTTCTT 61971 >seq2874 Length=261101 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || || || || | || | ||| |||||||| | ||| ||||| | | Sbjct 216076 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 216017 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||||||||| || || ||||| |||||||| || | || Sbjct 216016 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 215957 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| | || || || | | |||||| | |||||| Sbjct 215956 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 215897 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||||| ||||| ||||| |||||||| Sbjct 215896 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 215850 >seq2343 Length=47720 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||| ||||||||| | ||||||||| | ||| || | | |||| |||| |||||| || Sbjct 23781 AGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCGTCTTCCAGTTGTTTCCC 23722 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTT 43030 ||||||||||| | || ||||| | || | |||||||| || ||| ||| | ||| Sbjct 23721 AGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTC-CTGAATCTTCGCTT 23663 Query 43031 TGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGA 43089 | || | ||| || || | ||| ||| || |||| || || || || ||||| | | Sbjct 23662 TCACGTTATCAATCGTATC-CGAGCTCTCCACTTCTAAAGTAATCGTCTTACCGGTCAAA 23604 Query 43090 GTTTTCACAAAAATTTGCAT 43109 || || || || || ||||| Sbjct 23603 GTCTTGACGAAGATCTGCAT 23584 >seq481 Length=542854 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | | ||||||||||| ||| |||||||| | |||||||| | | Sbjct 210350 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGAATCCTTTTGGATGTTGTAATCAGCC 210291 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || | ||| || |||||||| || | | ||| || || | || Sbjct 210290 AGGGTACGACCATCTTCTAGTTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGAGGG 210231 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | |||| ||| || |||| | ||||| | ||| ||||| | ||| || || Sbjct 210230 ATCCCTTATTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTC-CGAGCTTTCCAC 210172 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| || ||||| || || || |||||||||||||| Sbjct 210171 CTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 210124 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || |||||||| | || ||||||||| | || || || | | || | |||| Sbjct 258829 AAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCAAGAGTCCTCCCGTCC 258770 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 || | || || |||||||||||||| | |||||| || | || | ||| || || || Sbjct 258769 TCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATCT 258710 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGT 43076 |||| | || || | |||| |||||| ||| ||| || || | ||| || || Sbjct 258709 TGGATCTTGGCCTTAACATTATCAACCGTGTCGG-AGCTCTCCACCTCCAACGTAATGGT 258651 Query 43077 TTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 ||| ||||| | |||||||||||| || |||||| Sbjct 258650 TTTACCGGTCAAAGTTTTCACAAATATCTGCATT 258617 >seq8609 Length=114046 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||| ||||||||| | ||||||||| | ||| || | | | || |||| ||||| || Sbjct 21358 AGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGTTTCCC 21299 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTT 43030 ||||||||||| | || ||||| | || | |||||||| || ||| ||| | ||| Sbjct 21298 AGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTC-CTGAATCTTCGCTT 21240 Query 43031 TGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGA 43089 | || | ||| || || | ||| ||| || |||| || || || || ||||| | | Sbjct 21239 TCACGTTATCAATCGTATC-CGAGCTCTCCACTTCTAAAGTAATGGTCTTACCGGTCAAA 21181 Query 43090 GTTTTCACAAAAATTTGCAT 43109 || || || || || ||||| Sbjct 21180 GTCTTGACGAAGATCTGCAT 21161 >seq9953 Length=604776 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966 |||| |||| ||||| || | ||||||||| | ||| || | | | || ||||||||| Sbjct 353524 TGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAATTGT 353583 Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAA 43025 || || || |||||||| | || ||||| | || | |||||||| || ||| ||| Sbjct 353584 TTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGAATCCCTTCTTTGTC-CTGAATCTT 353642 Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085 | | || || || | | || ||| | ||| || || | ||||| ||||| || || Sbjct 353643 CGCCTTAACATTGTCGATCGTATCGGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGT 353702 Query 43086 TAGAGTTTTCACAAAAATTTGCAT 43109 | || || || ||||| ||||| Sbjct 353703 CAACGTCTTGACGAAAATCTGCAT 353726 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966 |||| |||| ||||| || | ||||||||| | ||| || | | | || ||||||||| Sbjct 354650 TGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAATTGT 354709 Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAA 43025 || || || |||||||| | || ||||| | || | |||||||| || ||| ||| Sbjct 354710 TTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTC-CTGAATCTT 354768 Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085 | | || || || | | || ||| | ||| || || | ||||| ||||| || || Sbjct 354769 CGCCTTAACATTGTCGATCGTATCGGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGT 354828 Query 43086 TAGAGTTTTCACAAAAATTTGCAT 43109 | || || || ||||| ||||| Sbjct 354829 CAACGTCTTGACGAAAATCTGCAT 354852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381231319077558