Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq12924 104 2e-17
seq10219 104 2e-17
seq16075 102 6e-17
seq14353 98.7 8e-16
seq25104 96.9 3e-15
seq15267 96.9 3e-15
seq5610 95.1 9e-15
seq2874 95.1 9e-15
seq2343 95.1 9e-15
seq481 89.7 4e-13
seq8609 86.0 5e-12
seq9953 82.4 6e-11
>seq12924
Length=310248
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| |||||||||| | |||||| || | || ||| || || | ||| ||||| |
Sbjct 74079 CCACCACGCAGTCGGAGCACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCTGCA 74020
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||| | | || || | |||||||| ||||||||||| | ||| ||||| | ||
Sbjct 74019 AGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 73960
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || |||| |||| || || ||| ||||| | ||| ||
Sbjct 73959 ATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACT 73900
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || ||||| |||||||| ||||| |||||||||||||||||
Sbjct 73899 TCCAAAGTAATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 73853
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| |||||||||| | |||||| || | || ||||||||| | || ||||| |
Sbjct 60264 CCACCACGCAGTCGCAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCA 60205
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | | || || | ||| || || ||||||||||| | ||| || || | ||
Sbjct 60204 AGAGTCCTCCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 60145
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061
| ||| || || || |||| || || | ||| |||||| ||| ||| ||
Sbjct 60144 ATACCCTCCTTGTCTTGGATCTTGGTCTTCACGTTATCAATTGTGTCTG-AGCTCTCCAC 60086
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || ||||||||||| || | ||||||||||||||| ||||||
Sbjct 60085 CTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 60037
>seq10219
Length=308859
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| || |||| | |||||| |||| || ||| || || | ||| ||||| |
Sbjct 29838 CCTCCTCGAAGTCGGAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATCTGCA 29779
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||| | | || || | |||||||| ||||||||||| | ||| ||||| | ||
Sbjct 29778 AGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 29719
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || |||| |||| || || ||| ||||| | ||| ||
Sbjct 29718 ATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACT 29659
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || ||||| |||||||| ||||| |||||||||||||||||
Sbjct 29658 TCCAAAGTAATAGTCTTTCCGGTGAGAGTCTTCACAAAAATTTGCAT 29612
>seq16075
Length=278268
Score = 102 bits (112), Expect = 6e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960
|||||||||| ||| |||||| || | ||| ||||||| | || | | | || ||
Sbjct 276230 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCATCTTCA 276289
Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020
| |||||| || ||||||||||||| ||||| || | || | |||||||| || |||
Sbjct 276290 AGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTC-CTG 276348
Query 43021 -ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079
||| |||| || || ||| || || | |||||| || | || || || ||
Sbjct 276349 AATCTTGGCTTTCACATTGTCAATGGTATCCGAACTCTCGACCTCCAAGGTAATTGTCTT 276408
Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||| || |||||||| ||||| ||||||||
Sbjct 276409 TCCAGTGAGAGTTTTGACAAAGATTTGCAT 276438
>seq14353
Length=57137
Score = 98.7 bits (108), Expect = 8e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|||||||| || | | ||||||||||| ||| ||||||||| | |||||||| | |
Sbjct 32151 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 32092
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||||| | || || | ||| || |||||||| || | || ||| || || | ||
Sbjct 32091 AGGGTACGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGG 32032
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061
| |||||||| || |||| | ||||| | ||| ||||| | ||| || ||
Sbjct 32031 ATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTC-CGAGCTTTCCAC 31973
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || ||||| || ||||| || || || ||||| ||||||||
Sbjct 31972 CTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 31925
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | |||||||||| || ||||||||| | ||||| || |
Sbjct 32835 CCACCACGAAGACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCA 32776
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||| | | || || | || || || || |||||||| | |||||| || | ||
Sbjct 32775 AGTGTCCTGCCATCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGG 32716
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061
| |||||| || || ||| | ||||| || ||| |||||| ||| ||| ||
Sbjct 32715 ATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGG-AGCTCTCAAC 32657
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || ||||| ||||| ||||| ||||||||||| |||||
Sbjct 32656 TTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 32609
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | ||||||||||| ||| |||||||| | ||||| || | |
Sbjct 32379 CCACCACGAAGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCC 32320
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || | || || ||||| || || ||||| ||||| | ||| || || | |||
Sbjct 32319 AGGGTGCGACCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGA 32260
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||| || || || |||| | ||||| || ||| || || | ||| ||
Sbjct 32259 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACC 32200
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || || || |||||||| | || || ||||| |||||||||
Sbjct 32199 TCCAAAGTAATTGTCTTTCCGGTCAAGGTCTTAACAAAGATTTGCATT 32152
>seq25104
Length=148940
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | |||||||||| ||| |||||| || | ||| |||||||
Sbjct 36302 CCACCACGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCA 36243
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | | | || || | |||||| || ||||||||||||| ||||| || | ||
Sbjct 36242 AGAGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGG 36183
Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060
| |||||||| || ||| ||| |||| || | ||| || || | ||| ||| |
Sbjct 36182 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTCACATTATCAATGGTATC-CGAGCTCTCCA 36125
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || | || || || ||||| || |||||||| ||||| ||||||||
Sbjct 36124 CCTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 36076
>seq15267
Length=425869
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42900 CACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959
||| | ||||| ||| ||||| || | ||||| |||| || || || |||| ||
Sbjct 125038 CACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCCTC 124979
Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019
| || ||||||||||| || | |||||||| |||| || | ||||| || ||
Sbjct 124978 GAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTG 124919
Query 43020 GATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079
|||| ||||||| || | | |||||| || ||| || |||| ||||| || ||
Sbjct 124918 GATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTCTT 124859
Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| ||||| ||||| || || |||||||| ||
Sbjct 124858 CCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 124826
>seq5610
Length=141783
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|||||||| || || || || | || | ||| |||||||| | ||| ||||| | |
Sbjct 62431 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 62372
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||||||||| || || ||||| |||||||| || | ||
Sbjct 62371 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 62312
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || ||| | || || || | | |||||| | ||||||
Sbjct 62311 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 62252
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || ||||||| ||||| ||||| ||||||||
Sbjct 62251 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 62205
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| ||||| || | ||| || | |||| ||| || || || | || |||||||
Sbjct 62204 GCCCCCACGAAGGCGTAAGACGAGGTGGAGGGTGGATTCTTTCTGGATGTTATAATCGGC 62145
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| || || |||| || | |||||||| || ||||| | ||||| || |||| ||
Sbjct 62144 AAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCGGGTGG 62085
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CGA 43060
| ||||| || || |||| | ||||| || | | |||||| ||| | |||
Sbjct 62084 GATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGG-AGCTTTCGA 62026
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTT 43115
| || | ||||| || || ||||| || ||||||||||| || ||||| |||||
Sbjct 62025 CCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCATCTTCTT 61971
>seq2874
Length=261101
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|||||||| || || || || | || | ||| |||||||| | ||| ||||| | |
Sbjct 216076 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 216017
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||||||||| || || ||||| |||||||| || | ||
Sbjct 216016 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 215957
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || ||| | || || || | | |||||| | ||||||
Sbjct 215956 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 215897
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || ||||||| ||||| ||||| ||||||||
Sbjct 215896 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 215850
>seq2343
Length=47720
Score = 95.1 bits (104), Expect = 9e-15
Identities = 144/200 (72%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971
|||| ||||||||| | ||||||||| | ||| || | | |||| |||| |||||| ||
Sbjct 23781 AGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCGTCTTCCAGTTGTTTCCC 23722
Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTT 43030
||||||||||| | || ||||| | || | |||||||| || ||| ||| | |||
Sbjct 23721 AGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTC-CTGAATCTTCGCTT 23663
Query 43031 TGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGA 43089
| || | ||| || || | ||| ||| || |||| || || || || ||||| | |
Sbjct 23662 TCACGTTATCAATCGTATC-CGAGCTCTCCACTTCTAAAGTAATCGTCTTACCGGTCAAA 23604
Query 43090 GTTTTCACAAAAATTTGCAT 43109
|| || || || || |||||
Sbjct 23603 GTCTTGACGAAGATCTGCAT 23584
>seq481
Length=542854
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|||||||| || | | ||||||||||| ||| |||||||| | |||||||| | |
Sbjct 210350 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGAATCCTTTTGGATGTTGTAATCAGCC 210291
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||||| | || || | ||| || |||||||| || | | ||| || || | ||
Sbjct 210290 AGGGTACGACCATCTTCTAGTTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGAGGG 210231
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061
| |||| ||| || |||| | ||||| | ||| ||||| | ||| || ||
Sbjct 210230 ATCCCTTATTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTC-CGAGCTTTCCAC 210172
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || ||||| || ||||| || || || ||||||||||||||
Sbjct 210171 CTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 210124
Score = 82.4 bits (90), Expect = 6e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| |||||||| | || ||||||||| | || || || | | || | ||||
Sbjct 258829 AAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCAAGAGTCCTCCCGTCC 258770
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | || || |||||||||||||| | |||||| || | || | ||| || || ||
Sbjct 258769 TCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATCT 258710
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGT 43076
|||| | || || | |||| |||||| ||| ||| || || | ||| || ||
Sbjct 258709 TGGATCTTGGCCTTAACATTATCAACCGTGTCGG-AGCTCTCCACCTCCAACGTAATGGT 258651
Query 43077 TTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
||| ||||| | |||||||||||| || ||||||
Sbjct 258650 TTTACCGGTCAAAGTTTTCACAAATATCTGCATT 258617
>seq8609
Length=114046
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971
|||| ||||||||| | ||||||||| | ||| || | | | || |||| ||||| ||
Sbjct 21358 AGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGTTTCCC 21299
Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTT 43030
||||||||||| | || ||||| | || | |||||||| || ||| ||| | |||
Sbjct 21298 AGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTC-CTGAATCTTCGCTT 21240
Query 43031 TGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGA 43089
| || | ||| || || | ||| ||| || |||| || || || || ||||| | |
Sbjct 21239 TCACGTTATCAATCGTATC-CGAGCTCTCCACTTCTAAAGTAATGGTCTTACCGGTCAAA 21181
Query 43090 GTTTTCACAAAAATTTGCAT 43109
|| || || || || |||||
Sbjct 21180 GTCTTGACGAAGATCTGCAT 21161
>seq9953
Length=604776
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966
|||| |||| ||||| || | ||||||||| | ||| || | | | || |||||||||
Sbjct 353524 TGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAATTGT 353583
Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAA 43025
|| || || |||||||| | || ||||| | || | |||||||| || ||| |||
Sbjct 353584 TTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGAATCCCTTCTTTGTC-CTGAATCTT 353642
Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085
| | || || || | | || ||| | ||| || || | ||||| ||||| || ||
Sbjct 353643 CGCCTTAACATTGTCGATCGTATCGGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGT 353702
Query 43086 TAGAGTTTTCACAAAAATTTGCAT 43109
| || || || ||||| |||||
Sbjct 353703 CAACGTCTTGACGAAAATCTGCAT 353726
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966
|||| |||| ||||| || | ||||||||| | ||| || | | | || |||||||||
Sbjct 354650 TGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAATTGT 354709
Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAA 43025
|| || || |||||||| | || ||||| | || | |||||||| || ||| |||
Sbjct 354710 TTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTC-CTGAATCTT 354768
Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085
| | || || || | | || ||| | ||| || || | ||||| ||||| || ||
Sbjct 354769 CGCCTTAACATTGTCGATCGTATCGGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGT 354828
Query 43086 TAGAGTTTTCACAAAAATTTGCAT 43109
| || || || ||||| |||||
Sbjct 354829 CAACGTCTTGACGAAAATCTGCAT 354852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381231319077558
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