Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq29212 161 1e-34 seq22586 149 8e-31 seq28581 100 4e-16 seq25332 96.9 5e-15 seq19704 93.3 6e-14 seq12755 91.5 2e-13 seq8664 87.8 2e-12 >seq29212 Length=358297 Score = 161 bits (178), Expect = 1e-34 Identities = 391/586 (67%), Gaps = 6/586 (1%) Strand=Plus/Minus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| ||| || || || ||||| || ||||| ||||||| | || || ||||| || | Sbjct 223231 ACAGCAAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGA 223172 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAG-ACGCAAA-TGATCC 42174 | || | ||| ||||||| || |||||||| | ||||||||| | || ||| || || Sbjct 223171 AAGTTAATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTG--CC 223114 Query 42175 AGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT 42234 || || || || |||||||| || || || || | | || || || | | | Sbjct 223113 GGAGAAAAATATGCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCC 223054 Query 42235 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294 | | | ||||| || |||||||||||| || || || || |||| |||||| | Sbjct 223053 GCCGTCGATCCATTTCAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGT 222994 Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354 || | ||||| ||||||||| | |||||||| ||| || |||| | ||||| Sbjct 222993 AGCGTGGAAGAGGCGGTTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGGAGACT 222934 Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414 |||||| || || || || || || ||||| || || ||||| || || | ||||| Sbjct 222933 ATACATCTCAGAGTGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTC 222874 Query 42415 GGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474 | | || || ||| | || || |||| | |||||| || || || || Sbjct 222873 CGCGATTTGGACCTCTTTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCATCGGA 222814 Query 42475 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA-TTTAT 42533 || || || || || | ||||| | || || | ||||| ||| ||||| || | Sbjct 222813 TGCGGCGAAGAAGGCAAGGACATGACTGATGAAGTGGCGTTCGT-CGGCGTTAAGATTTT 222755 Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593 ||| | | ||| ||| | ||| ||||| || | |||||||| || ||||| | Sbjct 222754 GCCAGTGTGGAAGATCGGAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGG 222695 Query 42594 CCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAAT 42639 | || |||||||| | ||| || | | ||||| |||||||| || Sbjct 222694 CTTTCTTATACATTTCCCATATCTGTGGGTATTGGATTGGGAACAT 222649 >seq22586 Length=877411 Score = 149 bits (164), Expect = 8e-31 Identities = 388/587 (66%), Gaps = 6/587 (1%) Strand=Plus/Plus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| ||| || |||||||| ||||| ||||| ||||||| ||||| ||||| || | Sbjct 443810 ACAGCAAGCAAGCGAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGA 443869 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCA 42175 | || | ||||||||||| || | |||||| | ||||||||| | | || || ||| Sbjct 443870 AAGTTAATCCGGGCATTAACCCCCTCTTTTTTAACCAAAATAT-GGCACAGAAACTTCCG 443928 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 || || ||||| || ||||| ||||| || || | | || | || | | | Sbjct 443929 GAGAAAAAGATCCCCTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCG 443988 Query 42236 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 | | ||||| || |||||| ||||| || || ||||| |||| ||| || ||| Sbjct 443989 CCGTCGATCCATTTCATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATG 444048 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 || || ||| ||| ||||||| |||||| | || || |||| | ||||| Sbjct 444049 GCGCGGAAAAGACGGTTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTG 444108 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 ||||| || || || || ||||| || || || || || || || ||| | |||||| Sbjct 444109 TACATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCG 444168 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 | | ||| || ||| | || || |||| | || || ||||| || || | Sbjct 444169 GAGATCTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAG 444228 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAATTTAT 42533 || || ||||| || | || || | || || | | || || ||||| | || | Sbjct 444229 GCGGCGAAAAAGGCGAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTT--T 444286 Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593 ||| | | | ||| ||| | ||| ||||| ||| | |||||||| || ||||| | Sbjct 444287 CCCAGTGACGAAGATCGGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGG 444346 Query 42594 CCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATA 42640 | || || ||||| | ||| | || | ||||| || || || ||| Sbjct 444347 CTTTCTTGTACATTTCCCATACTTCTGGGTATTGGATCGGAAACATA 444393 Score = 149 bits (164), Expect = 8e-31 Identities = 388/587 (66%), Gaps = 6/587 (1%) Strand=Plus/Plus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| ||| || |||||||| ||||| ||||| ||||||| ||||| ||||| || | Sbjct 446945 ACAGCAAGCAAGCGAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGA 447004 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCA 42175 | || | ||||||||||| || | |||||| | ||||||||| | | || || ||| Sbjct 447005 AAGTTAATCCGGGCATTAACCCCCTCTTTTTTAACCAAAATAT-GGCACAGAAACTTCCG 447063 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 || || ||||| || ||||| ||||| || || | | || | || | | | Sbjct 447064 GAGAAAAAGATCCCCTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCG 447123 Query 42236 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 | | ||||| || |||||| ||||| || || ||||| |||| ||| || ||| Sbjct 447124 CCGTCGATCCATTTCATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATG 447183 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 || || ||| ||| ||||||| |||||| | || || |||| | ||||| Sbjct 447184 GCGCGGAAAAGACGGTTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTG 447243 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 ||||| || || || || ||||| || || || || || || || ||| | |||||| Sbjct 447244 TACATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCG 447303 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 | | ||| || ||| | || || |||| | || || ||||| || || | Sbjct 447304 GAGATCTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAG 447363 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAATTTAT 42533 || || ||||| || | || || | || || | | || || ||||| | || | Sbjct 447364 GCGGCGAAAAAGGCGAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTT--T 447421 Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593 ||| | | | ||| ||| | ||| ||||| ||| | |||||||| || ||||| | Sbjct 447422 CCCAGTGACGAAGATCGGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGG 447481 Query 42594 CCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATA 42640 | || || ||||| | ||| | || | ||||| || || || ||| Sbjct 447482 CTTTCTTGTACATTTCCCATACTTCTGGGTATTGGATCGGAAACATA 447528 >seq28581 Length=397638 Score = 100 bits (110), Expect = 4e-16 Identities = 197/289 (68%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| ||| || || || ||||| || ||||| ||||||| | || || ||||| || | Sbjct 34075 ACAGCAAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGA 34134 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCA 42175 | || | ||| ||||||| || |||||||| | ||||||||| | |||| | | || Sbjct 34135 AAGTTAATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCG-CGCAGAAACTGCCG 34193 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 || || || || |||||||| || || || || | | || || || | | | | Sbjct 34194 GAGAAAAATATGCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCGG 34253 Query 42236 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 | | ||||| || |||||||||||| || || || || |||| |||||| | Sbjct 34254 CCGTCGATCCATTTGAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTA 34313 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGA 42344 || | ||||| ||||||||| | |||||| | ||| || |||| Sbjct 34314 GCGTGGAAGAGGCGGTTTTTTTCGGTGGAATCTTTGATATAAGTTTCGA 34362 >seq25332 Length=434290 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 |||||| ||||| || | || |||||||| || ||||||||| ||| ||||| | | Sbjct 185741 AGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGAGACATCATGTG 185800 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | ||||| || || || || | ||| ||||| || || || | |||||| Sbjct 185801 ATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCAACCCTCATTAA 185860 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 ||| || || || ||||| | | ||| | | |||||| | |||||| | || | Sbjct 185861 CATGTGTTGGGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGGTAGGACCTCTCAAG 185920 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 ||||| ||||||||||| | || |||||| || || || || || Sbjct 185921 GGTTTTGAAACCAAAATAATCATAGTCAAAGTCCCGATCATATATGAT 185968 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 71164 ACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATT 71223 ||||||||| | || ||||| ||||| ||||| | ||||||||||||| | ||| Sbjct 183433 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 183492 Query 71224 TGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATG 71279 || |||||||||||| ||||||||||| | ||| || |||||| | ||||| Sbjct 183493 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATG 183548 >seq19704 Length=164701 Score = 93.3 bits (102), Expect = 6e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 ||||| ||||| | || | ||| |||| ||| | || | || |||||| | ||| ||| Sbjct 135825 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 135766 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 || |||| |||||| || || || || || | | || ||||||||| || ||| Sbjct 135765 TTAGATGTACCATTTGTTCCATGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 135706 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 | ||| ||||| || || ||| ||||| || || || || || ||||| || Sbjct 135705 ACACCAATTCCTCCAGCTGATTTGCTGATTATAGCACACTCCTTCAAAGTGTCATATATT 135646 Query 72358 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398 ||||| ||||||||||| |||| |||| ||| ||||| Sbjct 135645 CCCTCAATACTATCATCTTTCATACACAGTAAAAAGCAGCT 135605 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 |||||| ||||| || | || |||||||| || ||||||||| ||| ||||| | | Sbjct 135482 AGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGAGACATCATGTG 135423 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | ||||| || || || || | ||| ||||| || || || | |||||| Sbjct 135422 ATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCAACCCTCATTAA 135363 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 ||| || || || ||||| | | ||| | | ||| || | |||||| | || | Sbjct 135362 CATGTGTTGGGGCCTTTCTATAACCTTCCCTTGAACTTTTAAGAGGTAGGACCTCTCAAG 135303 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 ||||| ||||||||||| | || |||||| || || || || || Sbjct 135302 GGTTTTGAAACCAAAATAATCATAGTCAAAGTCCCGATCATATATGAT 135255 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 71164 ACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATT 71223 ||||||||| | || ||||| ||||| ||||| | ||||||||||||| | ||| Sbjct 137785 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 137726 Query 71224 TGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATG-TGA 71282 || |||||||||||| ||||||||||| | ||| || |||||| | ||||| | | Sbjct 137725 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 137666 Query 71283 TCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGAT 71320 | || || ||| | |||| | ||| | ||| |||| Sbjct 137665 GC-TATGTTGTCTCTAAGAGCATTCCAGTCCCACAGAT 137629 >seq12755 Length=243795 Score = 91.5 bits (100), Expect = 2e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 |||||| ||||| | |||| ||| || | ||| | || | || |||||| | ||| || Sbjct 40245 TCCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCC 40186 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 ||| |||| |||||| || || ||||| || || |||| ||||||||| || || Sbjct 40185 ATTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGA 40126 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 | ||| ||||| || || ||| ||| | || || || || || ||||| || Sbjct 40125 AACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATAT 40066 Query 72357 GCCCTCTATACTATCATCCATCATG 72381 || || ||||||||||| ||||| Sbjct 40065 TCCTTCAATACTATCATCTTTCATG 40041 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 ||| || ||||| || | || |||||||| || || |||||| ||| ||||| | | Sbjct 39902 AGTGCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 39843 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | ||||| || || || || | ||| ||||| || || || | |||||| Sbjct 39842 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 39783 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 |||||||||||| ||||| | | ||| | | |||||| | || || | |||| Sbjct 39782 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 39723 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 ||||| || ||||| || | || |||||| || || || || || Sbjct 39722 GGTTTTGAAGCCAAAGTAATCATAGTCAAAGTCACGATCATATATGAT 39675 >seq8664 Length=49552 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 ||| || ||||| || | || |||||||| || || |||||| ||| ||||| | | Sbjct 44898 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 44839 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | ||||| || || || || | ||| ||||| || || || | |||||| Sbjct 44838 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 44779 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 |||||||||||| ||||| | | ||| | | |||||| | || || | |||| Sbjct 44778 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 44719 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 ||||| || ||||| || | || |||||| || || || || || Sbjct 44718 GGTTTTGAAGCCAAAGTAATCATAGTCAAAGTCACGATCATATATGAT 44671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670889611720760