Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq2343 113 5e-20
seq8609 107 2e-18
seq13178 105 7e-18
seq10033 105 7e-18
seq9953 105 7e-18
seq6889 96.9 4e-15
seq14353 86.0 6e-12
seq5610 86.0 6e-12
seq2874 86.0 6e-12
seq2827 86.0 6e-12
seq481 86.0 6e-12
seq17827 84.2 2e-11
>seq2343
Length=47720
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | ||| | |||| || || || ||||| || |||||||| |
Sbjct 23810 CCACCACGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCC 23751
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| |||||||| |||||| | |||| | ||||||||| || ||
Sbjct 23750 AAAGTCCTTCCGTCTTCCAGTTGTTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGA 23691
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | ||| |||| | || |||
Sbjct 23690 ATTCCTTCTTTGTCCTGAATCTTCGCTTTCACGTTATCAATCGTATCCGAGCTCTCCACT 23631
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||| |||||||| || || ||||| || |||||
Sbjct 23630 TCTAAAGTAATCGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 23584
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || |||||||| ||| || || | ||||||||||||||| ||
Sbjct 23324 GTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCG 23265
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||||||||| || || || |||||||| ||||| || || ||
Sbjct 23264 GCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTCGCCTTA 23205
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||| | | || || || | ||| | |||||||||||||| |||
Sbjct 23204 ACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATTGTCTTGCCGGTCAAGGTT 23145
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| ||||||||
Sbjct 23144 TTCACGAAGATTTGCAT 23128
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| ||||| | ||||| || | ||||| || ||||| || || || |||||||||
Sbjct 23582 CCACCTCGAAGACGCAGGACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 23523
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | | ||| |||||||| || || || |||| ||||||||||| || || ||
Sbjct 23522 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 23463
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||| ||||| ||||| ||| | | || | |||||| | | || ||
Sbjct 23462 ATGCCTTCCTTGTCTTGGATTTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTCTCGACC 23403
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||| || || | || || ||||| ||||||||
Sbjct 23402 TCGAGAGTGATCGTCTTTCCCGTAAGCGTCTTAACGAAGATTTGCAT 23356
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || ||||| |||||||||||| || || | ||| || || ||||| ||
Sbjct 23096 GTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCCTCAAGCTGTTTTCCG 23037
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||||||||| ||||| || ||||| |||||||| || || ||||| ||
Sbjct 23036 GCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGTCTTC 22977
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||| | | || || || | ||| | |||||||||||| | ||
Sbjct 22976 ACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTC 22917
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 22916 TTAACGAAGATCTGCAT 22900
>seq8609
Length=114046
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || |||||||| ||| || || | ||||||||||||||| ||
Sbjct 20901 GTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCG 20842
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||| ||||||||||| || || || |||||||| ||||| || || |||
Sbjct 20841 GCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTCGCTTTA 20782
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||| | | || || || | ||| | |||||||| ||||| |||
Sbjct 20781 ACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATTGTCTTGCCAGTCAAGGTT 20722
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| ||||||||
Sbjct 20721 TTCACGAAGATTTGCAT 20705
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| ||||| | ||||| || | ||||| || ||||| || || || |||||||||
Sbjct 21159 CCACCTCGAAGACGCAGGACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 21100
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | | ||| |||||||| || || || |||| ||||||||||| || || ||
Sbjct 21099 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 21040
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||| ||||| ||||| ||| | | || | |||||| | | || ||
Sbjct 21039 ATGCCTTCCTTGTCTTGGATTTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTCTCGACC 20980
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||| ||||| | || || ||||| ||||||||
Sbjct 20979 TCGAGAGTGATCGTCTTTCCGGTAAGCGTCTTAACGAAGATTTGCAT 20933
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || ||||| |||||||||||| || || | ||||||||| ||||| ||
Sbjct 20673 GTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCG 20614
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||||||||| ||||| || ||||| |||||||| || || ||||| ||
Sbjct 20613 GCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTC 20554
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||| | | || || || | ||| | |||||||||||| | ||
Sbjct 20553 ACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTC 20494
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 20493 TTAACGAAGATCTGCAT 20477
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | ||| | |||| || || || ||||| || |||||||| |
Sbjct 21387 CCACCACGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCC 21328
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| || ||||| |||||| | |||| | ||||||||| || ||
Sbjct 21327 AAAGTCCTTCCATCTTCCAGCTGTTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGA 21268
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | ||| |||| | || |||
Sbjct 21267 ATTCCTTCTTTGTCCTGAATCTTCGCTTTCACGTTATCAATCGTATCCGAGCTCTCCACT 21208
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | ||||| |||||||| || || ||||| || |||||
Sbjct 21207 TCTAAAGTAATGGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 21161
>seq13178
Length=14983
Score = 105 bits (116), Expect = 7e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | ||||||||| ||||| ||
Sbjct 11943 GTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCTTCGAGCTGTTTGCCG 11884
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| |||
Sbjct 11883 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTT 11824
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 11823 ACATTATCGATGGTGTCAGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 11764
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 11763 TTGACGAAGATCTGCATA 11746
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | |||||||| ||||| ||
Sbjct 11715 GTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCG 11656
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| ||||| ||
Sbjct 11655 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTC 11596
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 11595 ACATTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 11536
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 11535 TTGACGAAGATCTGCATA 11518
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | ||| ||||| ||||| ||
Sbjct 11487 GTGGATTCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCG 11428
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| |||
Sbjct 11427 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTT 11368
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | || || || | || | ||||||||||| | |||
Sbjct 11367 ACATTATCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTT 11308
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 11307 TTGACGAAGATCTGCAT 11291
>seq10033
Length=52146
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
||| || ||||| | || || || || || |||||||||||| || |||| |||
Sbjct 52101 CAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCGTC 52042
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
||||||||||| || ||| |||| || | |||||| || || || |||||||| |||||
Sbjct 52041 CTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATGCCTTCCTTGTC 51982
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
|| || || | | || | ||||| | | ||| ||||| | ||| | ||
Sbjct 51981 TTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACTTCCAAAGTTATGGT 51922
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||||||||| ||||| ||||| || |||||
Sbjct 51921 CTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 51889
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || |||| ||| | || | ||| | || || || || || ||||||||||||
Sbjct 51888 GCCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 51829
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| || | |||||||| ||||| || || |||| |||||||| || || || ||
Sbjct 51828 CAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGG 51769
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||| ||||| ||||| || | | || | |||||| | || ||
Sbjct 51768 GATCCCTTCCTTGTCTTGGATTTTCGCCTTAACGTTGTCGATCGTGTCGGAACTCTCGAC 51709
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||| | || | ||||||||||||| || || ||||| || |||||
Sbjct 51708 TTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 51661
>seq9953
Length=604776
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
||| || ||||| | || || || || || |||||||||||| || |||| |||
Sbjct 354868 CAATACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCGTC 354927
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
||||||||||| || ||| | || || | |||||| || || || |||||||| |||||
Sbjct 354928 CTCGAGTTGTTTCCCGGCAAATATGAGCCTTTGCTGGTCTGGTGGGATGCCTTCCTTGTC 354987
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
|| ||| || | | || | ||||| | | ||| ||||| | ||| | ||
Sbjct 354988 TTGGATCTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACTTCCAAAGTTATGGT 355047
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||||||||| ||||| ||||| || |||||
Sbjct 355048 CTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 355080
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || |||| ||| | || | ||| | || || || || || ||||||||||||
Sbjct 355081 GCCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 355140
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| |||| ||| ||||||||||| || ||| |||| || | |||||| || || ||
Sbjct 355141 CAAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGG 355200
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|||||||| ||||| || || || | | || | ||||| | | ||| ||
Sbjct 355201 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGAC 355260
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||| | ||| | ||||||||||||| ||||| ||||| || |||||
Sbjct 355261 TTCCAAAGTTATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 355308
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || |||| ||| | || | ||| | || || || || || ||||||||||||
Sbjct 355309 GCCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 355368
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| |||| ||| ||||||||||| || ||| |||| || | |||||| || || ||
Sbjct 355369 CAAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGG 355428
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|||||||| ||||| || || || | | || | ||||| | | ||| ||
Sbjct 355429 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGAC 355488
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||| | ||| | ||||||||||||| || || ||||| || |||||
Sbjct 355489 TTCCAAAGTTATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 355536
>seq6889
Length=136205
Score = 96.9 bits (106), Expect = 4e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | ||| ||||| ||||| ||
Sbjct 105937 GTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCG 105878
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| ||
Sbjct 105877 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTC 105818
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 105817 ACATTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 105758
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 105757 TTGACGAAGATCTGCATA 105740
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
|||||| || | | |||||| | |||| || ||||| || || ||||| |||||
Sbjct 106424 GCCTCCACGAAGCCTCAAAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAGC 106365
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| || ||| || || || || || || ||| |||||| |||||| || || || ||
Sbjct 106364 CAAGGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGG 106305
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||| ||||| ||| || |||| | || | ||||||| || ||
Sbjct 106304 GATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCCAC 106245
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | |||||||||||||| ||||| ||||| || |||||
Sbjct 106244 CTCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 106197
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089
|||||||| ||||| || || |||| ||||| ||||| || || || |||||||| |||
Sbjct 106123 TCTTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTG 106064
Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149
|| |||||| |||| | || | ||||| | | || ||||| | || |
Sbjct 106063 TCTTGAATTTTAGACTTTACATTATCGATGGTGTCAGAGCTCTCGACTTCGAGGGTGATG 106004
Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||||||||||| || ||||| ||||| || ||||||
Sbjct 106003 GTCTTGCCGGTTAAAGTTTTGACGAAGATCTGCATA 105968
>seq14353
Length=57137
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
||||| ||||| || |||||||| || | |||| || || ||||||||||||
Sbjct 54847 GTAGACTCTTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGTTGTTTACCA 54788
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||| || | || || || ||||| || ||||||||||| || || ||
Sbjct 54787 GCAAAGATAAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTG 54728
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | ||| ||||||| || | |||||||| || | |||
Sbjct 54727 ACATTATCAATTGTGTCGGAGCTTTCCACTTCAAGGGTGATTGTCTTGCCAGTAAGGGTT 54668
Query 143168 TTTACGAATATTTGCAT 143184
|| || |||||||||||
Sbjct 54667 TTGACAAATATTTGCAT 54651
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | || | || ||||| | || || || ||||| ||||||||||| |
Sbjct 32151 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 32092
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| ||||| ||||| ||| |||| || | ||||| || |||||
Sbjct 32091 AGGGTACGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGG 32032
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || || | | || | ||||||| | ||| ||
Sbjct 32031 ATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCCACC 31972
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||||||||| | || || || || |||||||||
Sbjct 31971 TCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCATA 31924
>seq5610
Length=141783
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | | |||||| | |||| || ||||| ||||| || || ||||| |
Sbjct 62431 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 62372
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || ||| ||||| | |||||| ||||| |||||| ||| || || || || ||
Sbjct 62371 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 62312
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | || |||
Sbjct 62311 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 62252
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||||||||||| || ||||| || || ||||||||
Sbjct 62251 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 62205
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
||||| || || | ||| | ||| | |||| ||||| ||||| || ||||| |||||
Sbjct 62662 TGGCCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTATAATCA 62603
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
|| || ||| ||||| | |||||| || ||| |||| || | ||||||||| ||
Sbjct 62602 GCCAAAGTCCTCCCATCTTCCAATTGTTTGCCGGCAAAGATGAGCCTTTGCTGATCAGGT 62543
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| || ||||| || || ||| ||| || | | || | || || | | |||
Sbjct 62542 GGGATTCCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTATCGGAGCTTTCA 62483
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || | || | || ||||||||||| || || || || || |||||
Sbjct 62482 ACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTCTTGACAAAAATCTGCAT 62433
>seq2874
Length=261101
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | | |||||| | |||| || ||||| ||||| || || ||||| |
Sbjct 216076 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 216017
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || ||| ||||| | |||||| ||||| |||||| ||| || || || || ||
Sbjct 216016 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 215957
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | || |||
Sbjct 215956 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 215897
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||||||||||| || ||||| || || ||||||||
Sbjct 215896 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 215850
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
||||| || || | ||| | ||| | |||| ||||| ||||| || ||||| |||||
Sbjct 216307 TGGCCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTATAATCA 216248
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
|| || ||| ||||| | |||||| || ||| |||| || | ||||||||| ||
Sbjct 216247 GCCAAAGTCCTCCCATCTTCCAATTGTTTGCCGGCAAAGATGAGCCTTTGCTGATCAGGT 216188
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| || ||||| || || ||| ||| || | | || | || || | | |||
Sbjct 216187 GGGATTCCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTATCGGAGCTTTCA 216128
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || | || | || ||||||||||| || || || || || |||||
Sbjct 216127 ACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTCTTGACAAAAATCTGCAT 216078
>seq2827
Length=281962
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|||||||| || || |||||||||||| || || | ||| ||||| ||||| ||
Sbjct 48987 GTAGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCG 49046
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| ||
Sbjct 49047 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTC 49106
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | || || || | || | ||||||||||| | |||
Sbjct 49107 ACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTT 49166
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 49167 TTGACGAAGATCTGCAT 49183
>seq481
Length=542854
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | || | || ||||| | || || || ||||| ||||||||||| |
Sbjct 210350 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGAATCCTTTTGGATGTTGTAATCAGCC 210291
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| ||||| ||||| ||| |||| || | ||||| || |||||
Sbjct 210290 AGGGTACGACCATCTTCTAGTTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGAGGG 210231
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| |||| |||||| || || || | | || | ||||||| | ||| ||
Sbjct 210230 ATCCCTTATTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCCACC 210171
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||||||||||||| || || || || ||||||||
Sbjct 210170 TCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 210124
>seq17827
Length=208462
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTTCGAGTTGTTTACC 143046
|| ||||| ||||| |||||||| || ||| | |||| |||||||||||| |||||
Sbjct 3199 GTGGATTCCTTTTGGATGTTGTAGTCAGCTAAG-GTGCGGCCGTCTTCGAGTTGCTTACC 3141
Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106
|| |||| || ||||| || || || ||||||||||||||||| || || |||
Sbjct 3140 GGCGAAGATGAGGCGTTGTTGGTCCGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCTTT 3081
Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
| | || | ||||| | | || || || | || | ||||| || || | ||
Sbjct 3080 GACATTATCGATTGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCCGTTAGGGT 3021
Query 143167 TTTTACGAATATTTGCAT 143184
||| ||||| || |||||
Sbjct 3020 TTTCACGAAGATCTGCAT 3003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506825847682320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |