Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq21576 100 2e-16 seq481 98.7 7e-16 seq8903 96.9 2e-15 seq25104 95.1 9e-15 seq10219 93.3 3e-14 seq8609 91.5 1e-13 seq2343 91.5 1e-13 seq5610 87.8 1e-12 seq2874 87.8 1e-12 seq16075 82.4 5e-11 >seq21576 Length=865669 Score = 100 bits (110), Expect = 2e-16 Identities = 155/218 (71%), Gaps = 9/218 (4%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATCGTC 43971 |||||||| || || ||||||||||||||||||||| || | | || ||| || Sbjct 346534 ACCAAATGAAGAGTTGACTCTTTTTGAATATTATAATCAGC-AAGAGTCCTTCCATCCTC 346476 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGT----CCTGAGGT---ACACCTTCTT 44024 | ||||| ||||||||| || || | || ||| | || | || | ||| |||| Sbjct 346475 AAGTTGTTCTCCTGCAAAAATTAATCTTTACTGTTTGGGCCGGGGGGGGGATACCCTCTT 346416 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 | || |||||| | ||| || ||| ||| ||||| || ||| || || | |||| Sbjct 346415 TTTCCTGAATTTTGTCTTTCACAATATCAATAGTATTTGAACTCTCAACTTCCAATGTAA 346356 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||||| || || | ||||| ||||||||||||||| Sbjct 346355 TTGTTTTTCCAGTGAGGGTCTTGACAAATATTTGCATG 346318 >seq481 Length=542854 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| | | || |||||||| || || ||| |||||||| ||||| || Sbjct 258844 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCA 258785 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | | || || | || ||||| ||||| ||||||| || ||||| | || Sbjct 258784 AGAGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGG 258725 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | ||| || |||||| || || || || || |||| || || | |||||| Sbjct 258724 ATACCCTCCTTATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTCTCCACC 258665 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | |||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct 258664 TCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCAT 258618 >seq8903 Length=396785 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATCGTC 43971 |||||||| || || ||||||||||||||||||||| | || | | || ||| || Sbjct 292685 ACCAAATGAAGAGTTGACTCTTTTTGAATATTATAATCAGT-AAGAGTCCTTCCATCCTC 292627 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTG---AGGT---ACACCTTCTTT 44025 | ||||| ||||||||| || || | |||||||| | ||| | ||| ||||| Sbjct 292626 AAGTTGTTCTCCTGCAAAAATTAATCTTTGCTGGTTTGGGCAAGGGGAGATACCCTCTTT 292567 Query 44026 ATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAAT 44085 || |||||| | ||| || ||| ||| ||||| || ||| || || | ||||| Sbjct 292566 TTCCTGAATTTTGTCTTTCACAATATCAATAGTATTTGAACTCTCAACTTCCAATGTAAT 292507 Query 44086 TGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 |||||| || || | ||| ||||||||||| ||| Sbjct 292506 TGTTTTTCCAGTAAGGATCTGGACAAATATTTGGATG 292470 >seq25104 Length=148940 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCT-CATCGTC 43971 |||||||| || || ||| || || |||||||||||| || | | | |||| || Sbjct 36284 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCG-GCAAGAGTCCTTCCATCTTC 36226 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 | ||||||||| ||||| ||||| | ||| ||||| | || | |||||||| || Sbjct 36225 AAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTG 36166 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||| || ||| || || ||| ||||| | |||||| || | |||||||| || Sbjct 36165 AATCTTGGCTTTCACATTATCAATGGTATCCGAGCTCTCCACCTCCAAGGTAATTGTCTT 36106 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || | ||| || ||||| ||||||||| Sbjct 36105 TCCAGTGAGAGTTTTGACAAAGATTTGCATG 36075 >seq10219 Length=308859 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 30066 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 30008 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 30007 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 29948 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 29947 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 29888 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 29887 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 29840 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 30294 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 30236 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 30235 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30176 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 30175 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30116 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 30115 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 30068 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 30522 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 30464 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 30463 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30404 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 30403 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30344 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 30343 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 30296 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 30750 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 30692 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 30691 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30632 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 30631 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30572 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 30571 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 30524 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 30978 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 30920 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 30919 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30860 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 30859 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30800 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 30799 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 30752 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 31206 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 31148 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 31147 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31088 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 31087 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31028 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 31027 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 30980 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 31434 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 31376 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 31375 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31316 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 31315 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31256 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 31255 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 31208 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 31662 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 31604 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 31603 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31544 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 31543 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31484 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 31483 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 31436 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 31890 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 31832 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 31831 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31772 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 31771 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31712 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 31711 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 31664 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 32118 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 32060 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 32059 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32000 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 31999 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31940 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 31939 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 31892 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 32346 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 32288 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 32287 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32228 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 32227 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32168 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 32167 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 32120 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 32574 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 32516 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 32515 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32456 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 32455 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32396 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 32395 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 32348 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || || ||||| || ||||| || | Sbjct 32802 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 32744 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 32743 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32684 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 32683 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32624 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 32623 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 32576 >seq8609 Length=114046 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 43919 TGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGT 43978 || || ||| ||| ||||||||||| ||||| || | |||| |||| ||| Sbjct 21363 TGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGT 21304 Query 43979 TTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTT 44038 || || ||||| ||||||| |||||| || | || | |||||||| || ||| || Sbjct 21303 TTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTC 21244 Query 44039 TGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTT 44098 ||| || || ||| ||||| | |||||| || | ||||| || |||||||| Sbjct 21243 GCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATGGTCTTACCGGTC 21184 Query 44099 AAAGTCTTCACAAATATTTGCAT 44121 |||||||| || || || ||||| Sbjct 21183 AAAGTCTTGACGAAGATCTGCAT 21161 >seq2343 Length=47720 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 43919 TGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGT 43978 || || ||| ||| ||||||||||| ||||| || | | || |||| |||| Sbjct 23786 TGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCGTCTTCCAGTTGT 23727 Query 43979 TTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTT 44038 || || ||||| ||||||| |||||| || | || | |||||||| || ||| || Sbjct 23726 TTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTC 23667 Query 44039 TGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTT 44098 ||| || || ||| ||||| | |||||| || | ||||| || |||||||| Sbjct 23666 GCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATCGTCTTACCGGTC 23607 Query 44099 AAAGTCTTCACAAATATTTGCAT 44121 |||||||| || || || ||||| Sbjct 23606 AAAGTCTTGACGAAGATCTGCAT 23584 >seq5610 Length=141783 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||| ||||| |||||||| || | | |||| ||||||||||| || ||||| Sbjct 62624 CTCTTTCTGAATGTTATAATCAGCCAAAGTCCTCCCATCTTCCAATTGTTTGCCGGCAAA 62565 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTAT-CTGAAATTTTTTGTTTGACCA 44048 || | || |||||| || | || | ||||| |||| ||||| | |||| | | || Sbjct 62564 GATGAGCCTTTGCTGATCAGGTGGGATTCCTTCCTTATCCTGAA--TCTTTGCCTTAACA 62507 Query 44049 TAG-CAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTC 44107 | | ||| ||||| | || || || | || |||||||| ||||| |||||||| Sbjct 62506 TTGTCAATGGTATCGGAGCTTTCAACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTCTTG 62447 Query 44108 ACAAATATTTGCAT 44121 ||||| || ||||| Sbjct 62446 ACAAAAATCTGCAT 62433 >seq2874 Length=261101 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||| ||||| |||||||| || | | |||| ||||||||||| || ||||| Sbjct 216269 CTCTTTCTGAATGTTATAATCAGCCAAAGTCCTCCCATCTTCCAATTGTTTGCCGGCAAA 216210 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTAT-CTGAAATTTTTTGTTTGACCA 44048 || | || |||||| || | || | ||||| |||| ||||| | |||| | | || Sbjct 216209 GATGAGCCTTTGCTGATCAGGTGGGATTCCTTCCTTATCCTGAA--TCTTTGCCTTAACA 216152 Query 44049 TAG-CAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTC 44107 | | ||| ||||| | || || || | || |||||||| ||||| |||||||| Sbjct 216151 TTGTCAATGGTATCGGAGCTTTCAACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTCTTG 216092 Query 44108 ACAAATATTTGCAT 44121 ||||| || ||||| Sbjct 216091 ACAAAAATCTGCAT 216078 >seq16075 Length=278268 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || || ||| || || |||||||||||| | | |||| || Sbjct 276230 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCATCTTCA 276289 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | ||||||||| ||||| ||||| | ||| ||||| | || | |||||||| || | Sbjct 276290 AGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTGA 276349 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | ||| ||||| | ||| || || | |||||||| || Sbjct 276350 ATCTTGGCTTTCACATTGTCAATGGTATCCGAACTCTCGACCTCCAAGGTAATTGTCTTT 276409 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || | ||| || ||||| ||||||||| Sbjct 276410 CCAGTGAGAGTTTTGACAAAGATTTGCATG 276439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354648961079148